RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 EFNB2P52799 333 aa3.72□□□□□ -1.81
CKS1B-207ENST00000477676 LINC00205P59089 165 aa3.72□□□□□ -1.81
CKS1B-207ENST00000477676 TAS2R41P59536 307 aa3.72□□□□□ -1.81
CKS1B-207ENST00000477676 RPL15P61313 204 aaKnown RBP3.72□□□□□ -1.81
CKS1B-207ENST00000477676 MAGOHP61326 146 aaKnown RBP3.72□□□□□ -1.81
CKS1B-207ENST00000477676 PCBD1P61457 104 aa3.72□□□□□ -1.81
CKS1B-207ENST00000477676 PRKCDQ05655 676 aa3.72□□□□□ -1.81
CKS1B-207ENST00000477676 SCRN3Q0VDG4 424 aa3.72□□□□□ -1.81
CKS1B-207ENST00000477676 GK2Q14410 553 aaPredicted RBP3.72□□□□□ -1.81
CKS1B-207ENST00000477676 C2orf68Q2NKX9 166 aa3.72□□□□□ -1.81
CKS1B-207ENST00000477676 RNASE12Q5GAN4 147 aaKnown RBP3.72□□□□□ -1.81
CKS1B-207ENST00000477676 CORO6Q6QEF8 472 aa3.72□□□□□ -1.81
CKS1B-207ENST00000477676 TBPL2Q6SJ96 375 aa3.72□□□□□ -1.81
CKS1B-207ENST00000477676 ARL9Q6T311 187 aa3.72□□□□□ -1.81
CKS1B-207ENST00000477676 UNQ6126/PRO20091Q6UXV3 157 aa3.72□□□□□ -1.81
CKS1B-207ENST00000477676 BTN2A1Q7KYR7 527 aa3.72□□□□□ -1.81
CKS1B-207ENST00000477676 HDDC2Q7Z4H3 204 aa3.72□□□□□ -1.81
CKS1B-207ENST00000477676 VMO1Q7Z5L0 202 aa3.72□□□□□ -1.81
CKS1B-207ENST00000477676 PATL1Q86TB9 770 aaKnown RBP3.72□□□□□ -1.81
CKS1B-207ENST00000477676 NRMQ8IXM6 262 aa3.72□□□□□ -1.81
CKS1B-207ENST00000477676 C11orf53Q8IXP5 236 aa3.72□□□□□ -1.81
CKS1B-207ENST00000477676 LYG1Q8N1E2 194 aa3.72□□□□□ -1.81
CKS1B-207ENST00000477676 GCSAMQ8N6F7 178 aa3.72□□□□□ -1.81
CKS1B-207ENST00000477676 LY6G5BQ8NDX9 201 aa3.72□□□□□ -1.81
CKS1B-207ENST00000477676 TNFRSF14Q92956 283 aa3.72□□□□□ -1.81
CKS1B-207ENST00000477676 BPIFA2Q96DR5 249 aa3.72□□□□□ -1.81
CKS1B-207ENST00000477676 SEH1LQ96EE3 360 aa3.72□□□□□ -1.81
CKS1B-207ENST00000477676 PLEKHA8Q96JA3 519 aa3.72□□□□□ -1.81
CKS1B-207ENST00000477676 FAM210AQ96ND0 272 aa3.72□□□□□ -1.81
CKS1B-207ENST00000477676 ZNF583Q96ND8 569 aa3.72□□□□□ -1.81
CKS1B-207ENST00000477676 TSSK2Q96PF2 358 aa3.72□□□□□ -1.81
CKS1B-207ENST00000477676 TECTBQ96PL2 329 aa3.72□□□□□ -1.81
CKS1B-207ENST00000477676 PRR25Q96S07 402 aa3.72□□□□□ -1.81
CKS1B-207ENST00000477676 ECSITQ9BQ95 431 aa3.72□□□□□ -1.81
CKS1B-207ENST00000477676 CCDC28BQ9BUN5 200 aa3.72□□□□□ -1.81
CKS1B-207ENST00000477676 FAM234AQ9H0X4 552 aa3.72□□□□□ -1.81
CKS1B-207ENST00000477676 SLC25A32Q9H2D1 315 aa3.72□□□□□ -1.81
CKS1B-207ENST00000477676 PPP1R3EQ9H7J1 279 aa3.72□□□□□ -1.81
CKS1B-207ENST00000477676 PNRC2Q9NPJ4 139 aaKnown RBP3.72□□□□□ -1.81
CKS1B-207ENST00000477676 TUBG2Q9NRH3 451 aa3.72□□□□□ -1.81
CKS1B-207ENST00000477676 ZNRD1Q9P1U0 126 aa3.72□□□□□ -1.81
CKS1B-207ENST00000477676 STX18Q9P2W9 335 aaKnown RBP3.72□□□□□ -1.81
CKS1B-207ENST00000477676 RHCGQ9UBD6 479 aa3.72□□□□□ -1.81
CKS1B-207ENST00000477676 MGAT4CQ9UBM8 478 aa3.72□□□□□ -1.81
CKS1B-207ENST00000477676 DNAJB11Q9UBS4 358 aa3.72□□□□□ -1.81
CKS1B-207ENST00000477676 MED31Q9Y3C7 131 aa3.72□□□□□ -1.81
CKS1B-207ENST00000477676 ALMS1Q8TCU4 4167 aa3.71□□□□□ -1.82
CKS1B-207ENST00000477676 A0A087WUU8 490 aa3.71□□□□□ -1.82
CKS1B-207ENST00000477676 A0A087X0M5 115 aa3.71□□□□□ -1.82
CKS1B-207ENST00000477676 IGLV1-36A0A0B4J1U3 117 aa3.71□□□□□ -1.82
CKS1B-207ENST00000477676 A0A1B0GX30 115 aa3.71□□□□□ -1.82
CKS1B-207ENST00000477676 A6NIZ1 184 aa3.71□□□□□ -1.82
CKS1B-207ENST00000477676 K7EIL1 84 aa3.71□□□□□ -1.82
CKS1B-207ENST00000477676 LGALS8O00214 317 aa3.71□□□□□ -1.82
CKS1B-207ENST00000477676 DVL1O14640 695 aa3.71□□□□□ -1.82
CKS1B-207ENST00000477676 ADAM20O43506 726 aa3.71□□□□□ -1.82
CKS1B-207ENST00000477676 PTP4A3O75365 173 aa3.71□□□□□ -1.82
CKS1B-207ENST00000477676 LHBP01229 141 aa3.71□□□□□ -1.82
CKS1B-207ENST00000477676 CD14P08571 375 aa3.71□□□□□ -1.82
CKS1B-207ENST00000477676 ACSM4P0C7M7 580 aa3.71□□□□□ -1.82
CKS1B-207ENST00000477676 PSG1P11464 419 aa3.71□□□□□ -1.82
CKS1B-207ENST00000477676 CA6P23280 308 aa3.71□□□□□ -1.82
CKS1B-207ENST00000477676 FPR3P25089 353 aa3.71□□□□□ -1.82
CKS1B-207ENST00000477676 SLC9A3P48764 834 aa3.71□□□□□ -1.82
CKS1B-207ENST00000477676 RAP1BP61224 184 aa3.71□□□□□ -1.82
CKS1B-207ENST00000477676 STX1BP61266 288 aa3.71□□□□□ -1.82
CKS1B-207ENST00000477676 LSM6P62312 80 aaKnown RBP3.71□□□□□ -1.82
CKS1B-207ENST00000477676 RAP1AP62834 184 aa3.71□□□□□ -1.82
CKS1B-207ENST00000477676 AQP6Q13520 282 aa3.71□□□□□ -1.82
CKS1B-207ENST00000477676 SNAI3Q3KNW1 292 aa3.71□□□□□ -1.82
CKS1B-207ENST00000477676 CYBRD1Q53TN4 286 aa3.71□□□□□ -1.82
CKS1B-207ENST00000477676 HCP5Q6MZN7 132 aa3.71□□□□□ -1.82
CKS1B-207ENST00000477676 LIN54Q6MZP7 749 aa3.71□□□□□ -1.82
CKS1B-207ENST00000477676 NANOGP8Q6NSW7 305 aa3.71□□□□□ -1.82
CKS1B-207ENST00000477676 CCBE1Q6UXH8 406 aaPredicted RBP3.71□□□□□ -1.82
CKS1B-207ENST00000477676 GDPGP1Q6ZNW5 385 aa3.71□□□□□ -1.82
CKS1B-207ENST00000477676 CFAP77Q6ZQR2 320 aa3.71□□□□□ -1.82
CKS1B-207ENST00000477676 VTCN1Q7Z7D3 282 aa3.71□□□□□ -1.82
CKS1B-207ENST00000477676 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.71□□□□□ -1.82
CKS1B-207ENST00000477676 WDR86Q86TI4 376 aa3.71□□□□□ -1.82
CKS1B-207ENST00000477676 OR2AE1Q8NHA4 323 aa3.71□□□□□ -1.82
CKS1B-207ENST00000477676 PIFOQ8TCI5 191 aa3.71□□□□□ -1.82
CKS1B-207ENST00000477676 MRAPQ8TCY5 172 aa3.71□□□□□ -1.82
CKS1B-207ENST00000477676 WIPF2Q8TF74 440 aaPredicted RBP3.71□□□□□ -1.82
CKS1B-207ENST00000477676 ZNRF4Q8WWF5 429 aa3.71□□□□□ -1.82
CKS1B-207ENST00000477676 RORBQ92753 470 aa3.71□□□□□ -1.82
CKS1B-207ENST00000477676 APOBEC3DQ96AK3 386 aaPredicted RBP3.71□□□□□ -1.82
CKS1B-207ENST00000477676 COG8Q96MW5 612 aa3.71□□□□□ -1.82
CKS1B-207ENST00000477676 C7orf26Q96N11 449 aa3.71□□□□□ -1.82
CKS1B-207ENST00000477676 ZNF582Q96NG8 517 aaPredicted RBP3.71□□□□□ -1.82
CKS1B-207ENST00000477676 COQ7Q99807 217 aa3.71□□□□□ -1.82
CKS1B-207ENST00000477676 TRIM15Q9C019 465 aa3.71□□□□□ -1.82
CKS1B-207ENST00000477676 NUAK2Q9H093 628 aa3.71□□□□□ -1.82
CKS1B-207ENST00000477676 SYT4Q9H2B2 425 aa3.71□□□□□ -1.82
CKS1B-207ENST00000477676 MMADHCQ9H3L0 296 aaPredicted RBP3.71□□□□□ -1.82
CKS1B-207ENST00000477676 YY1AP1Q9H869 796 aa3.71□□□□□ -1.82
CKS1B-207ENST00000477676 TRIM36Q9NQ86 728 aa3.71□□□□□ -1.82
CKS1B-207ENST00000477676 SIRT7Q9NRC8 400 aa3.71□□□□□ -1.82
CKS1B-207ENST00000477676 TMEM100Q9NV29 134 aa3.71□□□□□ -1.82
CKS1B-207ENST00000477676 ATPIF1Q9UII2 106 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms