RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 HMGB3O15347 200 aaKnown RBP4.16□□□□□ -1.74
PTCD3-212ENST00000477520 HCRTO43612 131 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 CTAG2O75638 210 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 SLC16A8O95907 504 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 CD3DP04234 171 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 NBEAP1P0C6P0 100 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 SLC35G6P0C7Q6 338 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 ELFN1P0C7U0 828 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 ZNF735P0CB33 412 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 FGF5P12034 268 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 TDGF1P13385 188 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 IRF2P14316 349 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 HMGA1P17096 107 aaKnown RBP4.16□□□□□ -1.74
PTCD3-212ENST00000477520 HSD11B1P28845 292 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 GNRHRP30968 328 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 SLC6A6P31641 620 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 ACVR1BP36896 505 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 RAB7AP51149 207 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 NOVA1P51513 510 aaKnown RBP4.16□□□□□ -1.74
PTCD3-212ENST00000477520 MANFP55145 182 aaKnown RBP4.16□□□□□ -1.74
PTCD3-212ENST00000477520 MTCP1P56278 107 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 UBE2NP61088 152 aaKnown RBP4.16□□□□□ -1.74
PTCD3-212ENST00000477520 RPS11P62280 158 aaKnown RBP eCLIP4.16□□□□□ -1.74
PTCD3-212ENST00000477520 HLA-DRB3P79483 266 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 RASGEF1BQ0VAM2 473 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 HYAL1Q12794 435 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 OR5I1Q13606 314 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 PMS2P11Q13670 270 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 SLC17A1Q14916 467 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 OR7A5Q15622 319 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 HYAL4Q2M3T9 481 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 LRRC37A5PQ49AS3 106 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 ACSF3Q4G176 576 aaPredicted RBP4.16□□□□□ -1.74
PTCD3-212ENST00000477520 MIDNQ504T8 468 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 FAM27D1Q5T7N8 215 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 C1QL3Q5VWW1 255 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 FAM219BQ5XKK7 198 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.16□□□□□ -1.74
PTCD3-212ENST00000477520 CLEC18BQ6UXF7 455 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 UNQ6494/PRO21346Q6UXR6 183 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 ZNF705AQ6ZN79 300 aaPredicted RBP4.16□□□□□ -1.74
PTCD3-212ENST00000477520 ERN2Q76MJ5 926 aaKnown RBP4.16□□□□□ -1.74
PTCD3-212ENST00000477520 CHST9Q7L1S5 443 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 FAM220AQ7Z4H9 259 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 THOC6Q86W42 341 aaKnown RBP4.16□□□□□ -1.74
PTCD3-212ENST00000477520 GKN2Q86XP6 184 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 ZNF584Q8IVC4 421 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 ZNF595Q8IYB9 648 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 C20orf196Q8IYI0 205 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 ZNF100Q8IYN0 542 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 ZNF101Q8IZC7 436 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 PNKDQ8N490 385 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 CISD2Q8N5K1 135 aaKnown RBP4.16□□□□□ -1.74
PTCD3-212ENST00000477520 KLHDC1Q8N7A1 406 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 TMEM99Q8N816 258 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 ZNF615Q8N8J6 731 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 ZSCAN4Q8NAM6 433 aaPredicted RBP4.16□□□□□ -1.74
PTCD3-212ENST00000477520 C17orf47Q8NEP4 570 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 BBS1Q8NFJ9 593 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 VN1R2Q8NFZ6 395 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 OR4B1Q8NGF8 309 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 OR2L2Q8NH16 312 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 OR5B3Q8NH48 314 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 CPT1CQ8TCG5 803 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 ABHD5Q8WTS1 349 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 Q8WTZ3 238 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 TMEM170AQ8WVE7 144 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 DNASE2BQ8WZ79 361 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 FRZBQ92765 325 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 CTHRC1Q96CG8 243 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 PELI1Q96FA3 418 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 SEC22AQ96IW7 307 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 LRRC3BQ96PB8 259 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 TP53RKQ96S44 253 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 MYADMQ96S97 322 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 GPHA2Q96T91 129 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 P2RX4Q99571 388 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 CDX2Q99626 313 aaPredicted RBP4.16□□□□□ -1.74
PTCD3-212ENST00000477520 ALKBH7Q9BT30 221 aaPredicted RBP4.16□□□□□ -1.74
PTCD3-212ENST00000477520 TBL1XR1Q9BZK7 514 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 OR11A1Q9GZK7 315 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 ZNF700Q9H0M5 742 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 PCBD2Q9H0N5 130 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 RBKSQ9H477 322 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 IL21RQ9HBE5 538 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 Q9N2J8 555 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.16□□□□□ -1.74
PTCD3-212ENST00000477520 SERINC1Q9NRX5 453 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 SOHLH2Q9NX45 425 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 P4HTMQ9NXG6 502 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 NAGKQ9UJ70 344 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 CRLS1Q9UJA2 301 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 SERTAD3Q9UJW9 196 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 PADI1Q9ULC6 663 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 RPH3ALQ9UNE2 315 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 ATP23Q9Y6H3 246 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 GREB1Q4ZG55 1949 aa4.16□□□□□ -1.74
PTCD3-212ENST00000477520 PLXNA3P51805 1871 aa4.15□□□□□ -1.74
PTCD3-212ENST00000477520 IGLV3-16A0A075B6K0 115 aa4.15□□□□□ -1.75
PTCD3-212ENST00000477520 TRAV18A0A075B6X5 111 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms