RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 RAB22AQ9UL26 194 aa12.4□□□□□ -0.42
COL4A6-206ENST00000477085 ACACBO00763 2458 aa12.39□□□□□ -0.43
COL4A6-206ENST00000477085 MEIOCA2RUB1 952 aa12.39□□□□□ -0.43
COL4A6-206ENST00000477085 PRKACBP22694 351 aa12.39□□□□□ -0.43
COL4A6-206ENST00000477085 FUT6P51993 359 aa12.39□□□□□ -0.43
COL4A6-206ENST00000477085 NAAAQ02083 359 aa12.39□□□□□ -0.43
COL4A6-206ENST00000477085 PSG7Q13046 419 aa12.39□□□□□ -0.43
COL4A6-206ENST00000477085 CNN3Q15417 329 aaKnown RBP12.39□□□□□ -0.43
COL4A6-206ENST00000477085 BAIAP2L2Q6UXY1 529 aa12.39□□□□□ -0.43
COL4A6-206ENST00000477085 DNM1P46Q6ZS02 220 aa12.39□□□□□ -0.43
COL4A6-206ENST00000477085 STEAP2Q8NFT2 490 aa12.39□□□□□ -0.43
COL4A6-206ENST00000477085 OR10K1Q8NGX5 313 aa12.39□□□□□ -0.43
COL4A6-206ENST00000477085 TNFAIP8L1Q8WVP5 186 aa12.39□□□□□ -0.43
COL4A6-206ENST00000477085 ITFG2Q969R8 447 aa12.39□□□□□ -0.43
COL4A6-206ENST00000477085 NICN1Q9BSH3 213 aa12.39□□□□□ -0.43
COL4A6-206ENST00000477085 LPAR5Q9H1C0 372 aa12.39□□□□□ -0.43
COL4A6-206ENST00000477085 BANF2Q9H503 90 aa12.39□□□□□ -0.43
COL4A6-206ENST00000477085 ELF5Q9UKW6 265 aaPredicted RBP12.39□□□□□ -0.43
COL4A6-206ENST00000477085 ING4Q9UNL4 249 aa12.39□□□□□ -0.43
COL4A6-206ENST00000477085 POLEQ07864 2286 aa12.39□□□□□ -0.43
COL4A6-206ENST00000477085 TRAV18A0A075B6X5 111 aa12.38□□□□□ -0.43
COL4A6-206ENST00000477085 IGKV1-12A0A0C4DH73 117 aa12.38□□□□□ -0.43
COL4A6-206ENST00000477085 PQLC2LA1A4F0 135 aa12.38□□□□□ -0.43
COL4A6-206ENST00000477085 C16orf97H3BN30 126 aa12.38□□□□□ -0.43
COL4A6-206ENST00000477085 M0R1B8 84 aa12.38□□□□□ -0.43
COL4A6-206ENST00000477085 RAB27BO00194 218 aa12.38□□□□□ -0.43
COL4A6-206ENST00000477085 CCL21O00585 134 aa12.38□□□□□ -0.43
COL4A6-206ENST00000477085 SPRY1O43609 319 aaPredicted RBP12.38□□□□□ -0.43
COL4A6-206ENST00000477085 GSTZ1O43708 216 aaPredicted RBP12.38□□□□□ -0.43
COL4A6-206ENST00000477085 ANGPTL7O43827 346 aa12.38□□□□□ -0.43
COL4A6-206ENST00000477085 CDC14BO60729 498 aa12.38□□□□□ -0.43
COL4A6-206ENST00000477085 IGKV1D-12P01611 117 aa12.38□□□□□ -0.43
COL4A6-206ENST00000477085 THBDP07204 575 aa12.38□□□□□ -0.43
COL4A6-206ENST00000477085 SRP9P49458 86 aaKnown RBP12.38□□□□□ -0.43
COL4A6-206ENST00000477085 RBP2P50120 134 aa12.38□□□□□ -0.43
COL4A6-206ENST00000477085 PITPNAQ00169 270 aa12.38□□□□□ -0.43
COL4A6-206ENST00000477085 SCN1BQ07699 218 aa12.38□□□□□ -0.43
COL4A6-206ENST00000477085 CDSNQ15517 529 aa12.38□□□□□ -0.43
COL4A6-206ENST00000477085 MSMPQ1L6U9 139 aa12.38□□□□□ -0.43
COL4A6-206ENST00000477085 SLC22A6Q4U2R8 563 aa12.38□□□□□ -0.43
COL4A6-206ENST00000477085 CALHM1Q8IU99 346 aa12.38□□□□□ -0.43
COL4A6-206ENST00000477085 CSNK2A3Q8NEV1 391 aa12.38□□□□□ -0.43
COL4A6-206ENST00000477085 OR52I2Q8NH67 350 aa12.38□□□□□ -0.43
COL4A6-206ENST00000477085 KLF14Q8TD94 323 aaPredicted RBP12.38□□□□□ -0.43
COL4A6-206ENST00000477085 MUCL1Q96DR8 90 aa12.38□□□□□ -0.43
COL4A6-206ENST00000477085 C11orf54Q9H0W9 315 aaPredicted RBP12.38□□□□□ -0.43
COL4A6-206ENST00000477085 FAIMQ9NVQ4 179 aa12.38□□□□□ -0.43
COL4A6-206ENST00000477085 ATXN7O15265 892 aaPredicted RBP12.38□□□□□ -0.43
COL4A6-206ENST00000477085 PLATP00750 562 aa12.38□□□□□ -0.43
COL4A6-206ENST00000477085 CASP6P55212 293 aa12.38□□□□□ -0.43
COL4A6-206ENST00000477085 ADORA2A-AS1P86434 159 aa12.38□□□□□ -0.43
COL4A6-206ENST00000477085 ASAH1Q13510 395 aa12.38□□□□□ -0.43
COL4A6-206ENST00000477085 CEACAM21Q3KPI0 293 aa12.38□□□□□ -0.43
COL4A6-206ENST00000477085 ASCL4Q6XD76 172 aa12.38□□□□□ -0.43
COL4A6-206ENST00000477085 LHFPL2Q6ZUX7 228 aa12.38□□□□□ -0.43
COL4A6-206ENST00000477085 ACBD4Q8NC06 268 aa12.38□□□□□ -0.43
COL4A6-206ENST00000477085 SMIM4Q8WVI0 70 aa12.38□□□□□ -0.43
COL4A6-206ENST00000477085 OR5P3Q8WZ94 311 aa12.38□□□□□ -0.43
COL4A6-206ENST00000477085 ITPKCQ96DU7 683 aa12.38□□□□□ -0.43
COL4A6-206ENST00000477085 BORCS8Q96FH0 119 aa12.38□□□□□ -0.43
COL4A6-206ENST00000477085 ZMAT3Q9HA38 289 aaKnown RBP12.38□□□□□ -0.43
COL4A6-206ENST00000477085 DIABLOQ9NR28 239 aa12.38□□□□□ -0.43
COL4A6-206ENST00000477085 FZR1Q9UM11 496 aa12.38□□□□□ -0.43
COL4A6-206ENST00000477085 TPRP12270 2363 aaKnown RBP12.37□□□□□ -0.43
COL4A6-206ENST00000477085 ORC5O43913 435 aa12.37□□□□□ -0.43
COL4A6-206ENST00000477085 MPIG6BO95866 241 aa12.37□□□□□ -0.43
COL4A6-206ENST00000477085 TMEM225BP0DP42 221 aa12.37□□□□□ -0.43
COL4A6-206ENST00000477085 RAC2P15153 192 aa12.37□□□□□ -0.43
COL4A6-206ENST00000477085 CA6P23280 308 aa12.37□□□□□ -0.43
COL4A6-206ENST00000477085 RAD52P43351 418 aa12.37□□□□□ -0.43
COL4A6-206ENST00000477085 CAPZA1P52907 286 aa12.37□□□□□ -0.43
COL4A6-206ENST00000477085 C3orf36Q3SXR2 165 aa12.37□□□□□ -0.43
COL4A6-206ENST00000477085 TRIQKQ629K1 86 aa12.37□□□□□ -0.43
COL4A6-206ENST00000477085 MYO7BQ6PIF6 2116 aa12.37□□□□□ -0.43
COL4A6-206ENST00000477085 OR2W3Q7Z3T1 314 aa12.37□□□□□ -0.43
COL4A6-206ENST00000477085 ZDHHC23Q8IYP9 409 aa12.37□□□□□ -0.43
COL4A6-206ENST00000477085 PNLDC1Q8NA58 520 aaKnown RBP12.37□□□□□ -0.43
COL4A6-206ENST00000477085 KCNG3Q8TAE7 436 aa12.37□□□□□ -0.43
COL4A6-206ENST00000477085 COX4I2Q96KJ9 171 aa12.37□□□□□ -0.43
COL4A6-206ENST00000477085 TECTBQ96PL2 329 aa12.37□□□□□ -0.43
COL4A6-206ENST00000477085 NEDD4LQ96PU5 975 aa12.37□□□□□ -0.43
COL4A6-206ENST00000477085 KLK11Q9UBX7 282 aa12.37□□□□□ -0.43
COL4A6-206ENST00000477085 SLC7A11Q9UPY5 501 aa12.37□□□□□ -0.43
COL4A6-206ENST00000477085 ADGRG4Q8IZF6 3080 aa12.37□□□□□ -0.43
COL4A6-206ENST00000477085 CRTAPO75718 401 aaPredicted RBP12.36□□□□□ -0.43
COL4A6-206ENST00000477085 TPPPO94811 219 aa12.36□□□□□ -0.43
COL4A6-206ENST00000477085 UBBP0CG47 229 aa12.36□□□□□ -0.43
COL4A6-206ENST00000477085 VEGFCP49767 419 aa12.36□□□□□ -0.43
COL4A6-206ENST00000477085 GPM6AP51674 278 aa12.36□□□□□ -0.43
COL4A6-206ENST00000477085 GUCA2AQ02747 115 aa12.36□□□□□ -0.43
COL4A6-206ENST00000477085 PDZK1IP1Q13113 114 aa12.36□□□□□ -0.43
COL4A6-206ENST00000477085 TRIM16LQ309B1 348 aa12.36□□□□□ -0.43
COL4A6-206ENST00000477085 NRARPQ7Z6K4 114 aa12.36□□□□□ -0.43
COL4A6-206ENST00000477085 SETD6Q8TBK2 473 aa12.36□□□□□ -0.43
COL4A6-206ENST00000477085 RNF170Q96K19 258 aa12.36□□□□□ -0.43
COL4A6-206ENST00000477085 GHRLQ9UBU3 117 aa12.36□□□□□ -0.43
COL4A6-206ENST00000477085 RBMX2Q9Y388 322 aaKnown RBP12.36□□□□□ -0.43
COL4A6-206ENST00000477085 USP24Q9UPU5 2620 aa12.36□□□□□ -0.43
COL4A6-206ENST00000477085 ANKRD30BLA7E2S9 258 aa12.35□□□□□ -0.43
COL4A6-206ENST00000477085 FOXI3A8MTJ6 420 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms