RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 CSNK2A3Q8NEV1 391 aa9.13□□□□□ -0.95
BRCA1-213ENST00000476777 PROKR2Q8NFJ6 384 aa9.13□□□□□ -0.95
BRCA1-213ENST00000476777 OR52J3Q8NH60 311 aa9.13□□□□□ -0.95
BRCA1-213ENST00000476777 DYDC1Q8WWB3 177 aa9.13□□□□□ -0.95
BRCA1-213ENST00000476777 OR5P3Q8WZ94 311 aa9.13□□□□□ -0.95
BRCA1-213ENST00000476777 SDSLQ96GA7 329 aa9.13□□□□□ -0.95
BRCA1-213ENST00000476777 DHRS1Q96LJ7 313 aa9.13□□□□□ -0.95
BRCA1-213ENST00000476777 RTL8AQ9BWD3 113 aa9.13□□□□□ -0.95
BRCA1-213ENST00000476777 SP140LQ9H930 580 aa9.13□□□□□ -0.95
BRCA1-213ENST00000476777 GID8Q9NWU2 228 aa9.13□□□□□ -0.95
BRCA1-213ENST00000476777 ZNF319Q9P2F9 582 aa9.13□□□□□ -0.95
BRCA1-213ENST00000476777 PITPNC1Q9UKF7 332 aa9.13□□□□□ -0.95
BRCA1-213ENST00000476777 FAM32AQ9Y421 112 aaKnown RBP9.13□□□□□ -0.95
BRCA1-213ENST00000476777 LRP12Q9Y561 859 aa9.13□□□□□ -0.95
BRCA1-213ENST00000476777 TSSC4Q9Y5U2 329 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-213ENST00000476777 COMMD3-BMI1R4GMX3 469 aa9.13□□□□□ -0.95
BRCA1-213ENST00000476777 ZNF878C9JN71 531 aa9.12□□□□□ -0.95
BRCA1-213ENST00000476777 ANXA2P07355 339 aaKnown RBP9.12□□□□□ -0.95
BRCA1-213ENST00000476777 SPARCP09486 303 aa9.12□□□□□ -0.95
BRCA1-213ENST00000476777 GLRA1P23415 457 aa9.12□□□□□ -0.95
BRCA1-213ENST00000476777 SLC25A1P53007 311 aa9.12□□□□□ -0.95
BRCA1-213ENST00000476777 RPL31P62899 125 aaKnown RBP9.12□□□□□ -0.95
BRCA1-213ENST00000476777 LIPEQ05469 1076 aa9.12□□□□□ -0.95
BRCA1-213ENST00000476777 KLF10Q13118 480 aa9.12□□□□□ -0.95
BRCA1-213ENST00000476777 RNF144BQ7Z419 303 aa9.12□□□□□ -0.95
BRCA1-213ENST00000476777 CPLX4Q7Z7G2 160 aa9.12□□□□□ -0.95
BRCA1-213ENST00000476777 SLC15A3Q8IY34 581 aa9.12□□□□□ -0.95
BRCA1-213ENST00000476777 LINC00482Q8N8I6 264 aa9.12□□□□□ -0.95
BRCA1-213ENST00000476777 OR51L1Q8NGJ5 315 aa9.12□□□□□ -0.95
BRCA1-213ENST00000476777 OR2T4Q8NH00 348 aa9.12□□□□□ -0.95
BRCA1-213ENST00000476777 MYDGFQ969H8 173 aa9.12□□□□□ -0.95
BRCA1-213ENST00000476777 MALSU1Q96EH3 234 aa9.12□□□□□ -0.95
BRCA1-213ENST00000476777 LYSTQ99698 3801 aa9.12□□□□□ -0.95
BRCA1-213ENST00000476777 SIKE1Q9BRV8 207 aa9.12□□□□□ -0.95
BRCA1-213ENST00000476777 YY1AP1Q9H869 796 aa9.12□□□□□ -0.95
BRCA1-213ENST00000476777 ABCB10Q9NRK6 738 aa9.12□□□□□ -0.95
BRCA1-213ENST00000476777 MPC1Q9Y5U8 109 aa9.12□□□□□ -0.95
BRCA1-213ENST00000476777 DHRS12A0PJE2 317 aa9.11□□□□□ -0.95
BRCA1-213ENST00000476777 ZNF850A8MQ14 1090 aa9.11□□□□□ -0.95
BRCA1-213ENST00000476777 ODF3BA8MYP8 253 aa9.11□□□□□ -0.95
BRCA1-213ENST00000476777 F2RL2O00254 374 aa9.11□□□□□ -0.95
BRCA1-213ENST00000476777 ZNF593O00488 134 aaPredicted RBP9.11□□□□□ -0.95
BRCA1-213ENST00000476777 GSTA4O15217 222 aa9.11□□□□□ -0.95
BRCA1-213ENST00000476777 DIRAS1O95057 198 aa9.11□□□□□ -0.95
BRCA1-213ENST00000476777 CCL3L1P16619 93 aa9.11□□□□□ -0.95
BRCA1-213ENST00000476777 CFL1P23528 166 aaKnown RBP9.11□□□□□ -0.95
BRCA1-213ENST00000476777 ACKR3P25106 362 aa9.11□□□□□ -0.95
BRCA1-213ENST00000476777 SLC15A1P46059 708 aa9.11□□□□□ -0.95
BRCA1-213ENST00000476777 ENTPD1P49961 510 aa9.11□□□□□ -0.95
BRCA1-213ENST00000476777 DYNLT3P51808 116 aa9.11□□□□□ -0.95
BRCA1-213ENST00000476777 CAPZA1P52907 286 aa9.11□□□□□ -0.95
BRCA1-213ENST00000476777 GRB2P62993 217 aaKnown RBP9.11□□□□□ -0.95
BRCA1-213ENST00000476777 PRDX4Q13162 271 aa9.11□□□□□ -0.95
BRCA1-213ENST00000476777 DCTN2Q13561 401 aaKnown RBP9.11□□□□□ -0.95
BRCA1-213ENST00000476777 SSX2Q16385 188 aa9.11□□□□□ -0.95
BRCA1-213ENST00000476777 ZNF782Q6ZMW2 699 aaPredicted RBP9.11□□□□□ -0.95
BRCA1-213ENST00000476777 KCTD8Q6ZWB6 473 aa9.11□□□□□ -0.95
BRCA1-213ENST00000476777 FAM57BQ71RH2 274 aa9.11□□□□□ -0.95
BRCA1-213ENST00000476777 FTMTQ8N4E7 242 aa9.11□□□□□ -0.95
BRCA1-213ENST00000476777 ZNF511Q8NB15 262 aa9.11□□□□□ -0.95
BRCA1-213ENST00000476777 OR52H1Q8NGJ2 320 aa9.11□□□□□ -0.95
BRCA1-213ENST00000476777 HPSE2Q8WWQ2 592 aa9.11□□□□□ -0.95
BRCA1-213ENST00000476777 DPF1Q92782 380 aa9.11□□□□□ -0.95
BRCA1-213ENST00000476777 FOXRED1Q96CU9 486 aaPredicted RBP9.11□□□□□ -0.95
BRCA1-213ENST00000476777 RNF170Q96K19 258 aa9.11□□□□□ -0.95
BRCA1-213ENST00000476777 C7orf34Q96L11 122 aa9.11□□□□□ -0.95
BRCA1-213ENST00000476777 GPR61Q9BZJ8 451 aa9.11□□□□□ -0.95
BRCA1-213ENST00000476777 USE1Q9NZ43 259 aa9.11□□□□□ -0.95
BRCA1-213ENST00000476777 CD300AQ9UGN4 299 aa9.11□□□□□ -0.95
BRCA1-213ENST00000476777 AP3M1Q9Y2T2 418 aa9.11□□□□□ -0.95
BRCA1-213ENST00000476777 TBL2Q9Y4P3 447 aaKnown RBP9.11□□□□□ -0.95
BRCA1-213ENST00000476777 SORL1Q92673 2214 aa9.11□□□□□ -0.95
BRCA1-213ENST00000476777 DNAH1Q9P2D7 4330 aa9.1□□□□□ -0.95
BRCA1-213ENST00000476777 DSCAML1Q8TD84 2053 aa9.1□□□□□ -0.95
BRCA1-213ENST00000476777 hCG_1809904A0A1W2PP81 198 aa9.1□□□□□ -0.95
BRCA1-213ENST00000476777 A0A1W2PPE2 198 aa9.1□□□□□ -0.95
BRCA1-213ENST00000476777 A0A1W2PPH5 198 aa9.1□□□□□ -0.95
BRCA1-213ENST00000476777 A0A1W2PR64 198 aa9.1□□□□□ -0.95
BRCA1-213ENST00000476777 A0A1W2PRV1 198 aa9.1□□□□□ -0.95
BRCA1-213ENST00000476777 EDF1O60869 148 aaKnown RBP9.1□□□□□ -0.95
BRCA1-213ENST00000476777 MTRF1O75570 445 aaKnown RBP9.1□□□□□ -0.95
BRCA1-213ENST00000476777 CLIC3O95833 236 aa9.1□□□□□ -0.95
BRCA1-213ENST00000476777 CST4P01036 141 aa9.1□□□□□ -0.95
BRCA1-213ENST00000476777 ARG1P05089 322 aa9.1□□□□□ -0.95
BRCA1-213ENST00000476777 JUNBP17275 347 aaPredicted RBP9.1□□□□□ -0.95
BRCA1-213ENST00000476777 DLX6P56179 175 aa9.1□□□□□ -0.95
BRCA1-213ENST00000476777 ZNF121P58317 390 aaPredicted RBP9.1□□□□□ -0.95
BRCA1-213ENST00000476777 ZNF273Q14593 569 aa9.1□□□□□ -0.95
BRCA1-213ENST00000476777 MAPRE2Q15555 327 aa9.1□□□□□ -0.95
BRCA1-213ENST00000476777 SNCBQ16143 134 aa9.1□□□□□ -0.95
BRCA1-213ENST00000476777 GFOD2Q3B7J2 385 aa9.1□□□□□ -0.95
BRCA1-213ENST00000476777 TEX30Q5JUR7 227 aa9.1□□□□□ -0.95
BRCA1-213ENST00000476777 THAP5Q7Z6K1 395 aa9.1□□□□□ -0.95
BRCA1-213ENST00000476777 ARPINQ7Z6K5 226 aa9.1□□□□□ -0.95
BRCA1-213ENST00000476777 CENPVQ7Z7K6 275 aaPredicted RBP9.1□□□□□ -0.95
BRCA1-213ENST00000476777 CD177Q8N6Q3 437 aa9.1□□□□□ -0.95
BRCA1-213ENST00000476777 OR4M1Q8NGD0 313 aa9.1□□□□□ -0.95
BRCA1-213ENST00000476777 CHID1Q9BWS9 393 aa9.1□□□□□ -0.95
BRCA1-213ENST00000476777 OR10A2Q9H208 303 aa9.1□□□□□ -0.95
BRCA1-213ENST00000476777 RGCCQ9H4X1 137 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms