RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 XAF1Q6GPH4 301 aa8.12□□□□□ -1.11
HDAC3-208ENST00000476739 FAM166AQ6J272 317 aa8.12□□□□□ -1.11
HDAC3-208ENST00000476739 LYPD2Q6UXB3 125 aa8.12□□□□□ -1.11
HDAC3-208ENST00000476739 WDR82Q6UXN9 313 aa8.12□□□□□ -1.11
HDAC3-208ENST00000476739 IL17RELQ6ZVW7 336 aa8.12□□□□□ -1.11
HDAC3-208ENST00000476739 MOB3CQ70IA8 216 aa8.12□□□□□ -1.11
HDAC3-208ENST00000476739 DOK3Q7L591 496 aa8.12□□□□□ -1.11
HDAC3-208ENST00000476739 KCTD20Q7Z5Y7 419 aa8.12□□□□□ -1.11
HDAC3-208ENST00000476739 THAP5Q7Z6K1 395 aa8.12□□□□□ -1.11
HDAC3-208ENST00000476739 ZDHHC23Q8IYP9 409 aa8.12□□□□□ -1.11
HDAC3-208ENST00000476739 C8orf59Q8N0T1 100 aaPredicted RBP8.12□□□□□ -1.11
HDAC3-208ENST00000476739 GCSAMQ8N6F7 178 aa8.12□□□□□ -1.11
HDAC3-208ENST00000476739 DEFB108BQ8NET1 73 aa8.12□□□□□ -1.11
HDAC3-208ENST00000476739 OR11L1Q8NGX0 322 aa8.12□□□□□ -1.11
HDAC3-208ENST00000476739 OR10AC1Q8NH08 325 aa8.12□□□□□ -1.11
HDAC3-208ENST00000476739 GGHQ92820 318 aa8.12□□□□□ -1.11
HDAC3-208ENST00000476739 RPL3LQ92901 407 aaKnown RBP8.12□□□□□ -1.11
HDAC3-208ENST00000476739 ERGIC1Q969X5 290 aa8.12□□□□□ -1.11
HDAC3-208ENST00000476739 SEH1LQ96EE3 360 aa8.12□□□□□ -1.11
HDAC3-208ENST00000476739 RNF170Q96K19 258 aa8.12□□□□□ -1.11
HDAC3-208ENST00000476739 MICU1Q9BPX6 476 aa8.12□□□□□ -1.11
HDAC3-208ENST00000476739 TMEM246Q9BRR3 403 aa8.12□□□□□ -1.11
HDAC3-208ENST00000476739 TLNRD1Q9H1K6 362 aa8.12□□□□□ -1.11
HDAC3-208ENST00000476739 FN3KRPQ9HA64 309 aa8.12□□□□□ -1.11
HDAC3-208ENST00000476739 GPR173Q9NS66 373 aa8.12□□□□□ -1.11
HDAC3-208ENST00000476739 C14orf119Q9NWQ9 140 aa8.12□□□□□ -1.11
HDAC3-208ENST00000476739 RNF7Q9UBF6 113 aa8.12□□□□□ -1.11
HDAC3-208ENST00000476739 CLEC2DQ9UHP7 191 aa8.12□□□□□ -1.11
HDAC3-208ENST00000476739 ENPP5Q9UJA9 477 aa8.12□□□□□ -1.11
HDAC3-208ENST00000476739 NOP16Q9Y3C1 178 aaKnown RBP8.12□□□□□ -1.11
HDAC3-208ENST00000476739 PPIAL4AQ9Y536 164 aa8.12□□□□□ -1.11
HDAC3-208ENST00000476739 HSPE1-MOB4S4R3N1 261 aa8.12□□□□□ -1.11
HDAC3-208ENST00000476739 IGHV3OR15-7A0A075B7D8 119 aa8.11□□□□□ -1.11
HDAC3-208ENST00000476739 LOC107986453A0A1B0GWG9 222 aa8.11□□□□□ -1.11
HDAC3-208ENST00000476739 hCG_1807616A0A1W2PRN6 198 aa8.11□□□□□ -1.11
HDAC3-208ENST00000476739 LRRC30A6NM36 301 aa8.11□□□□□ -1.11
HDAC3-208ENST00000476739 ANXA2P2A6NMY6 339 aa8.11□□□□□ -1.11
HDAC3-208ENST00000476739 OR4C45A6NMZ5 311 aa8.11□□□□□ -1.11
HDAC3-208ENST00000476739 CEACAM18A8MTB9 384 aa8.11□□□□□ -1.11
HDAC3-208ENST00000476739 B4DSR2 109 aa8.11□□□□□ -1.11
HDAC3-208ENST00000476739 ZNF732B4DXR9 585 aa8.11□□□□□ -1.11
HDAC3-208ENST00000476739 F5H0A9 414 aaPredicted RBP8.11□□□□□ -1.11
HDAC3-208ENST00000476739 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.11□□□□□ -1.11
HDAC3-208ENST00000476739 SYT7O43581 403 aa8.11□□□□□ -1.11
HDAC3-208ENST00000476739 MTRF1O75570 445 aaKnown RBP8.11□□□□□ -1.11
HDAC3-208ENST00000476739 RHBDL1O75783 438 aa8.11□□□□□ -1.11
HDAC3-208ENST00000476739 TPPPO94811 219 aa8.11□□□□□ -1.11
HDAC3-208ENST00000476739 NRASP01111 189 aa8.11□□□□□ -1.11
HDAC3-208ENST00000476739 LHBP01229 141 aa8.11□□□□□ -1.11
HDAC3-208ENST00000476739 MSMBP08118 114 aa8.11□□□□□ -1.11
HDAC3-208ENST00000476739 HTR1AP08908 422 aa8.11□□□□□ -1.11
HDAC3-208ENST00000476739 IRF2P14316 349 aa8.11□□□□□ -1.11
HDAC3-208ENST00000476739 ATP6V1B1P15313 513 aa8.11□□□□□ -1.11
HDAC3-208ENST00000476739 NAT1P18440 290 aa8.11□□□□□ -1.11
HDAC3-208ENST00000476739 MDH2P40926 338 aaKnown RBP8.11□□□□□ -1.11
HDAC3-208ENST00000476739 GPM6AP51674 278 aa8.11□□□□□ -1.11
HDAC3-208ENST00000476739 ACTA2P62736 377 aa8.11□□□□□ -1.11
HDAC3-208ENST00000476739 ACTG2P63267 376 aa8.11□□□□□ -1.11
HDAC3-208ENST00000476739 DOC2BQ14184 412 aa8.11□□□□□ -1.11
HDAC3-208ENST00000476739 CEACAM21Q3KPI0 293 aa8.11□□□□□ -1.11
HDAC3-208ENST00000476739 ZNF404Q494X3 552 aa8.11□□□□□ -1.11
HDAC3-208ENST00000476739 FAM76BQ5HYJ3 339 aa8.11□□□□□ -1.11
HDAC3-208ENST00000476739 PLCXD3Q63HM9 321 aa8.11□□□□□ -1.11
HDAC3-208ENST00000476739 FDX2Q6P4F2 183 aa8.11□□□□□ -1.11
HDAC3-208ENST00000476739 KCTD8Q6ZWB6 473 aa8.11□□□□□ -1.11
HDAC3-208ENST00000476739 ANKRD13BQ86YJ7 626 aa8.11□□□□□ -1.11
HDAC3-208ENST00000476739 SYS1Q8N2H4 156 aa8.11□□□□□ -1.11
HDAC3-208ENST00000476739 FTMTQ8N4E7 242 aa8.11□□□□□ -1.11
HDAC3-208ENST00000476739 SCCPDHQ8NBX0 429 aa8.11□□□□□ -1.11
HDAC3-208ENST00000476739 BPIFB6Q8NFQ5 453 aa8.11□□□□□ -1.11
HDAC3-208ENST00000476739 OR51A4Q8NGJ6 313 aa8.11□□□□□ -1.11
HDAC3-208ENST00000476739 LRRC29Q8WV35 223 aa8.11□□□□□ -1.11
HDAC3-208ENST00000476739 BORCS5Q969J3 196 aa8.11□□□□□ -1.11
HDAC3-208ENST00000476739 RAB39BQ96DA2 213 aa8.11□□□□□ -1.11
HDAC3-208ENST00000476739 POM121Q96HA1 1249 aa8.11□□□□□ -1.11
HDAC3-208ENST00000476739 RTL8AQ9BWD3 113 aa8.11□□□□□ -1.11
HDAC3-208ENST00000476739 JAM3Q9BX67 310 aa8.11□□□□□ -1.11
HDAC3-208ENST00000476739 OCEL1Q9H607 264 aa8.11□□□□□ -1.11
HDAC3-208ENST00000476739 ZNF696Q9H7X3 374 aa8.11□□□□□ -1.11
HDAC3-208ENST00000476739 PATZ1Q9HBE1 687 aaKnown RBP8.11□□□□□ -1.11
HDAC3-208ENST00000476739 INPP5EQ9NRR6 644 aa8.11□□□□□ -1.11
HDAC3-208ENST00000476739 RAB26Q9ULW5 256 aa8.11□□□□□ -1.11
HDAC3-208ENST00000476739 PCDHB10Q9UN67 800 aa8.11□□□□□ -1.11
HDAC3-208ENST00000476739 A0A1B0GVI7 797 aa8.1□□□□□ -1.11
HDAC3-208ENST00000476739 A0A1B0GW55 424 aa8.1□□□□□ -1.11
HDAC3-208ENST00000476739 KIAA1324LA8MWY0 1029 aaPredicted RBP8.1□□□□□ -1.11
HDAC3-208ENST00000476739 H0YJX3 145 aa8.1□□□□□ -1.11
HDAC3-208ENST00000476739 IFNL4K9M1U5 179 aa8.1□□□□□ -1.11
HDAC3-208ENST00000476739 TNFRSF13BO14836 293 aaPredicted RBP8.1□□□□□ -1.11
HDAC3-208ENST00000476739 CRLF1O75462 422 aa8.1□□□□□ -1.11
HDAC3-208ENST00000476739 FCN3O75636 299 aa8.1□□□□□ -1.11
HDAC3-208ENST00000476739 ZFPL1O95159 310 aa8.1□□□□□ -1.11
HDAC3-208ENST00000476739 LALBAP00709 142 aa8.1□□□□□ -1.11
HDAC3-208ENST00000476739 AVPP01185 164 aa8.1□□□□□ -1.11
HDAC3-208ENST00000476739 TFF1P04155 84 aa8.1□□□□□ -1.11
HDAC3-208ENST00000476739 WNT2P09544 360 aa8.1□□□□□ -1.11
HDAC3-208ENST00000476739 DUX4L2P0CJ85 424 aa8.1□□□□□ -1.11
HDAC3-208ENST00000476739 DUX4L3P0CJ86 424 aa8.1□□□□□ -1.11
HDAC3-208ENST00000476739 DUX4L4P0CJ87 422 aa8.1□□□□□ -1.11
HDAC3-208ENST00000476739 DUX4L5P0CJ88 424 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms