RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 OR5D18Q8NGL1 313 aa11.81□□□□□ -0.52
TRAF4-210ENST00000475329 KCNG3Q8TAE7 436 aa11.81□□□□□ -0.52
TRAF4-210ENST00000475329 SLC25A40Q8TBP6 338 aa11.81□□□□□ -0.52
TRAF4-210ENST00000475329 FAM46BQ96A09 425 aa11.81□□□□□ -0.52
TRAF4-210ENST00000475329 C1orf147Q96MC9 270 aaPredicted RBP11.81□□□□□ -0.52
TRAF4-210ENST00000475329 S100A13Q99584 98 aa11.81□□□□□ -0.52
TRAF4-210ENST00000475329 OR2J1Q9GZK6 312 aa11.81□□□□□ -0.52
TRAF4-210ENST00000475329 MYEF2Q9P2K5 600 aaKnown RBP11.81□□□□□ -0.52
TRAF4-210ENST00000475329 BSNQ9UPA5 3926 aa11.81□□□□□ -0.52
TRAF4-210ENST00000475329 RP1L1Q8IWN7 2480 aaPredicted RBP11.81□□□□□ -0.52
TRAF4-210ENST00000475329 PRR14LQ5THK1 2151 aa11.8□□□□□ -0.52
TRAF4-210ENST00000475329 KDM4BO94953 1096 aa11.8□□□□□ -0.52
TRAF4-210ENST00000475329 PTTG1O95997 202 aa11.8□□□□□ -0.52
TRAF4-210ENST00000475329 NAT2P11245 290 aa11.8□□□□□ -0.52
TRAF4-210ENST00000475329 CALCRP30988 508 aa11.8□□□□□ -0.52
TRAF4-210ENST00000475329 ASCL1P50553 236 aa11.8□□□□□ -0.52
TRAF4-210ENST00000475329 ZP1P60852 638 aa11.8□□□□□ -0.52
TRAF4-210ENST00000475329 ERVS71-1P61550 626 aa11.8□□□□□ -0.52
TRAF4-210ENST00000475329 DGCR2P98153 550 aa11.8□□□□□ -0.52
TRAF4-210ENST00000475329 NAAAQ02083 359 aa11.8□□□□□ -0.52
TRAF4-210ENST00000475329 UNC119Q13432 240 aa11.8□□□□□ -0.52
TRAF4-210ENST00000475329 FAM189A2Q15884 450 aa11.8□□□□□ -0.52
TRAF4-210ENST00000475329 HACD4Q5VWC8 232 aa11.8□□□□□ -0.52
TRAF4-210ENST00000475329 OR2T2Q6IF00 324 aa11.8□□□□□ -0.52
TRAF4-210ENST00000475329 RAB12Q6IQ22 244 aa11.8□□□□□ -0.52
TRAF4-210ENST00000475329 ALKBH2Q6NS38 261 aa11.8□□□□□ -0.52
TRAF4-210ENST00000475329 CENPSQ8N2Z9 138 aa11.8□□□□□ -0.52
TRAF4-210ENST00000475329 BHLHE23Q8NDY6 225 aa11.8□□□□□ -0.52
TRAF4-210ENST00000475329 SMIM4Q8WVI0 70 aa11.8□□□□□ -0.52
TRAF4-210ENST00000475329 TRIM63Q969Q1 353 aa11.8□□□□□ -0.52
TRAF4-210ENST00000475329 CMBLQ96DG6 245 aa11.8□□□□□ -0.52
TRAF4-210ENST00000475329 CST11Q9H112 138 aa11.8□□□□□ -0.52
TRAF4-210ENST00000475329 OCEL1Q9H607 264 aa11.8□□□□□ -0.52
TRAF4-210ENST00000475329 NPAP1Q9NZP6 1156 aa11.8□□□□□ -0.52
TRAF4-210ENST00000475329 TBC1D24Q9ULP9 559 aa11.8□□□□□ -0.52
TRAF4-210ENST00000475329 ING4Q9UNL4 249 aa11.8□□□□□ -0.52
TRAF4-210ENST00000475329 MPC1Q9Y5U8 109 aa11.8□□□□□ -0.52
TRAF4-210ENST00000475329 SPENQ96T58 3664 aaKnown RBP11.8□□□□□ -0.52
TRAF4-210ENST00000475329 DSPP15924 2871 aaKnown RBP11.79□□□□□ -0.52
TRAF4-210ENST00000475329 IGKV1-27A0A075B6S5 117 aa11.79□□□□□ -0.52
TRAF4-210ENST00000475329 IQCF6A8MYZ5 107 aa11.79□□□□□ -0.52
TRAF4-210ENST00000475329 CDC14BO60729 498 aa11.79□□□□□ -0.52
TRAF4-210ENST00000475329 CRTAPO75718 401 aaPredicted RBP11.79□□□□□ -0.52
TRAF4-210ENST00000475329 MPIG6BO95866 241 aa11.79□□□□□ -0.52
TRAF4-210ENST00000475329 TMEM225BP0DP42 221 aa11.79□□□□□ -0.52
TRAF4-210ENST00000475329 CHRNB4P30926 498 aa11.79□□□□□ -0.52
TRAF4-210ENST00000475329 ASAH1Q13510 395 aa11.79□□□□□ -0.52
TRAF4-210ENST00000475329 OXA1LQ15070 435 aa11.79□□□□□ -0.52
TRAF4-210ENST00000475329 CEACAM21Q3KPI0 293 aa11.79□□□□□ -0.52
TRAF4-210ENST00000475329 SLC22A6Q4U2R8 563 aa11.79□□□□□ -0.52
TRAF4-210ENST00000475329 RNASE12Q5GAN4 147 aaKnown RBP11.79□□□□□ -0.52
TRAF4-210ENST00000475329 DCDC5Q6ZRR9 648 aa11.79□□□□□ -0.52
TRAF4-210ENST00000475329 BIVMQ86UB2 503 aa11.79□□□□□ -0.52
TRAF4-210ENST00000475329 HIST1H2AAQ96QV6 131 aa11.79□□□□□ -0.52
TRAF4-210ENST00000475329 GAL3ST1Q99999 423 aa11.79□□□□□ -0.52
TRAF4-210ENST00000475329 THAP7Q9BT49 309 aaPredicted RBP11.79□□□□□ -0.52
TRAF4-210ENST00000475329 TMEM59Q9BXS4 323 aa11.79□□□□□ -0.52
TRAF4-210ENST00000475329 ELL3Q9HB65 397 aaPredicted RBP11.79□□□□□ -0.52
TRAF4-210ENST00000475329 CRIM1Q9NZV1 1036 aa11.79□□□□□ -0.52
TRAF4-210ENST00000475329 MRPL15Q9P015 296 aaKnown RBP11.79□□□□□ -0.52
TRAF4-210ENST00000475329 NOP16Q9Y3C1 178 aaKnown RBP11.79□□□□□ -0.52
TRAF4-210ENST00000475329 SPEF1Q9Y4P9 236 aa11.79□□□□□ -0.52
TRAF4-210ENST00000475329 TRAV18A0A075B6X5 111 aa11.78□□□□□ -0.52
TRAF4-210ENST00000475329 LINC00854A0A1B0GVQ3 168 aa11.78□□□□□ -0.52
TRAF4-210ENST00000475329 PQLC2LA1A4F0 135 aa11.78□□□□□ -0.52
TRAF4-210ENST00000475329 OR5B21A6NL26 309 aa11.78□□□□□ -0.52
TRAF4-210ENST00000475329 GABARAPH6UMI1 98 aa11.78□□□□□ -0.52
TRAF4-210ENST00000475329 CRYAAP02489 173 aa11.78□□□□□ -0.52
TRAF4-210ENST00000475329 PPP3CBP16298 524 aa11.78□□□□□ -0.52
TRAF4-210ENST00000475329 ZNF718Q3SXZ3 478 aa11.78□□□□□ -0.52
TRAF4-210ENST00000475329 ZNF57Q68EA5 555 aaPredicted RBP11.78□□□□□ -0.52
TRAF4-210ENST00000475329 SEZ6L2Q6UXD5 910 aa11.78□□□□□ -0.52
TRAF4-210ENST00000475329 CDH24Q86UP0 819 aa11.78□□□□□ -0.52
TRAF4-210ENST00000475329 ACBD4Q8NC06 268 aa11.78□□□□□ -0.52
TRAF4-210ENST00000475329 OR5A2Q8NGI9 324 aa11.78□□□□□ -0.52
TRAF4-210ENST00000475329 KLF14Q8TD94 323 aaPredicted RBP11.78□□□□□ -0.52
TRAF4-210ENST00000475329 HPSE2Q8WWQ2 592 aa11.78□□□□□ -0.52
TRAF4-210ENST00000475329 FCAMRQ8WWV6 532 aa11.78□□□□□ -0.52
TRAF4-210ENST00000475329 YIPF5Q969M3 257 aa11.78□□□□□ -0.52
TRAF4-210ENST00000475329 MARS2Q96GW9 593 aaKnown RBP11.78□□□□□ -0.52
TRAF4-210ENST00000475329 NUDT16L1Q9BRJ7 211 aaKnown RBP11.78□□□□□ -0.52
TRAF4-210ENST00000475329 URM1Q9BTM9 101 aaKnown RBP11.78□□□□□ -0.52
TRAF4-210ENST00000475329 METTL9Q9H1A3 318 aa11.78□□□□□ -0.52
TRAF4-210ENST00000475329 AUNIPQ9H7T9 357 aa11.78□□□□□ -0.52
TRAF4-210ENST00000475329 COQ3Q9NZJ6 369 aa11.78□□□□□ -0.52
TRAF4-210ENST00000475329 SPTA1P02549 2419 aa11.78□□□□□ -0.52
TRAF4-210ENST00000475329 PKD1L2Q7Z442 2459 aa11.78□□□□□ -0.52
TRAF4-210ENST00000475329 SPRY1O43609 319 aaPredicted RBP11.77□□□□□ -0.53
TRAF4-210ENST00000475329 LILRA1O75019 489 aa11.77□□□□□ -0.53
TRAF4-210ENST00000475329 PLATP00750 562 aa11.77□□□□□ -0.53
TRAF4-210ENST00000475329 CD3GP09693 182 aa11.77□□□□□ -0.53
TRAF4-210ENST00000475329 MGMTP16455 207 aa11.77□□□□□ -0.53
TRAF4-210ENST00000475329 SERPINA2P20848 420 aa11.77□□□□□ -0.53
TRAF4-210ENST00000475329 GCH1P30793 250 aa11.77□□□□□ -0.53
TRAF4-210ENST00000475329 MPV17P39210 176 aa11.77□□□□□ -0.53
TRAF4-210ENST00000475329 GPM6AP51674 278 aa11.77□□□□□ -0.53
TRAF4-210ENST00000475329 PSG7Q13046 419 aa11.77□□□□□ -0.53
TRAF4-210ENST00000475329 PDZK1IP1Q13113 114 aa11.77□□□□□ -0.53
TRAF4-210ENST00000475329 SNTB2Q13425 540 aaKnown RBP11.77□□□□□ -0.53
TRAF4-210ENST00000475329 GPR176Q14439 515 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms