RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 NCK1P16333 377 aa10.2□□□□□ -0.78
SKA3-206ENST00000475251 GSSP48637 474 aa10.2□□□□□ -0.78
SKA3-206ENST00000475251 CAPZA1P52907 286 aa10.2□□□□□ -0.78
SKA3-206ENST00000475251 ERVFRD-1P60508 538 aa10.2□□□□□ -0.78
SKA3-206ENST00000475251 PRDX4Q13162 271 aa10.2□□□□□ -0.78
SKA3-206ENST00000475251 DCTN2Q13561 401 aaKnown RBP10.2□□□□□ -0.78
SKA3-206ENST00000475251 GFOD2Q3B7J2 385 aa10.2□□□□□ -0.78
SKA3-206ENST00000475251 FAM76BQ5HYJ3 339 aa10.2□□□□□ -0.78
SKA3-206ENST00000475251 DEFB121Q5J5C9 76 aa10.2□□□□□ -0.78
SKA3-206ENST00000475251 C11orf87Q6NUJ2 197 aa10.2□□□□□ -0.78
SKA3-206ENST00000475251 FAM57BQ71RH2 274 aa10.2□□□□□ -0.78
SKA3-206ENST00000475251 ZNRF1Q8ND25 227 aa10.2□□□□□ -0.78
SKA3-206ENST00000475251 OR51L1Q8NGJ5 315 aa10.2□□□□□ -0.78
SKA3-206ENST00000475251 RPS4Y2Q8TD47 263 aa10.2□□□□□ -0.78
SKA3-206ENST00000475251 OR5P3Q8WZ94 311 aa10.2□□□□□ -0.78
SKA3-206ENST00000475251 MCUR1Q96AQ8 359 aa10.2□□□□□ -0.78
SKA3-206ENST00000475251 RNF170Q96K19 258 aa10.2□□□□□ -0.78
SKA3-206ENST00000475251 HIST1H2AAQ96QV6 131 aa10.2□□□□□ -0.78
SKA3-206ENST00000475251 DDOQ99489 341 aa10.2□□□□□ -0.78
SKA3-206ENST00000475251 EFCAB1Q9HAE3 211 aa10.2□□□□□ -0.78
SKA3-206ENST00000475251 DCAF13Q9NV06 445 aaKnown RBP10.2□□□□□ -0.78
SKA3-206ENST00000475251 USE1Q9NZ43 259 aa10.2□□□□□ -0.78
SKA3-206ENST00000475251 CDH10Q9Y6N8 788 aa10.2□□□□□ -0.78
SKA3-206ENST00000475251 DHRS12A0PJE2 317 aa10.19□□□□□ -0.78
SKA3-206ENST00000475251 MEGF11A6BM72 1044 aa10.19□□□□□ -0.78
SKA3-206ENST00000475251 ZNF850A8MQ14 1090 aa10.19□□□□□ -0.78
SKA3-206ENST00000475251 ADARB2-AS1A8MUL3 147 aa10.19□□□□□ -0.78
SKA3-206ENST00000475251 E9PQ18 207 aa10.19□□□□□ -0.78
SKA3-206ENST00000475251 K7EIL1 84 aa10.19□□□□□ -0.78
SKA3-206ENST00000475251 CLIC3O95833 236 aa10.19□□□□□ -0.78
SKA3-206ENST00000475251 CST4P01036 141 aa10.19□□□□□ -0.78
SKA3-206ENST00000475251 PF4P02776 101 aa10.19□□□□□ -0.78
SKA3-206ENST00000475251 ZNF121P58317 390 aaPredicted RBP10.19□□□□□ -0.78
SKA3-206ENST00000475251 RPL31P62899 125 aaKnown RBP10.19□□□□□ -0.78
SKA3-206ENST00000475251 CD69Q07108 199 aa10.19□□□□□ -0.78
SKA3-206ENST00000475251 EIF2B1Q14232 305 aaKnown RBP10.19□□□□□ -0.78
SKA3-206ENST00000475251 HABP2Q14520 560 aaPredicted RBP10.19□□□□□ -0.78
SKA3-206ENST00000475251 GLYATQ6IB77 296 aa10.19□□□□□ -0.78
SKA3-206ENST00000475251 LYPD4Q6UWN0 246 aa10.19□□□□□ -0.78
SKA3-206ENST00000475251 HACD2Q6Y1H2 254 aa10.19□□□□□ -0.78
SKA3-206ENST00000475251 TIGD4Q8IY51 512 aa10.19□□□□□ -0.78
SKA3-206ENST00000475251 MKXQ8IYA7 352 aa10.19□□□□□ -0.78
SKA3-206ENST00000475251 ZDHHC23Q8IYP9 409 aa10.19□□□□□ -0.78
SKA3-206ENST00000475251 SLC37A3Q8NCC5 494 aa10.19□□□□□ -0.78
SKA3-206ENST00000475251 ZNF671Q8TAW3 534 aa10.19□□□□□ -0.78
SKA3-206ENST00000475251 PIFOQ8TCI5 191 aa10.19□□□□□ -0.78
SKA3-206ENST00000475251 WIPF2Q8TF74 440 aaPredicted RBP10.19□□□□□ -0.78
SKA3-206ENST00000475251 PGAM5Q96HS1 289 aa10.19□□□□□ -0.78
SKA3-206ENST00000475251 RCC1LQ96I51 464 aaKnown RBP10.19□□□□□ -0.78
SKA3-206ENST00000475251 GPR61Q9BZJ8 451 aa10.19□□□□□ -0.78
SKA3-206ENST00000475251 WNT10AQ9GZT5 417 aa10.19□□□□□ -0.78
SKA3-206ENST00000475251 ELL3Q9HB65 397 aaPredicted RBP10.19□□□□□ -0.78
SKA3-206ENST00000475251 TBL2Q9Y4P3 447 aaKnown RBP10.19□□□□□ -0.78
SKA3-206ENST00000475251 NOTCH3Q9UM47 2321 aa10.19□□□□□ -0.78
SKA3-206ENST00000475251 F2RL2O00254 374 aa10.18□□□□□ -0.78
SKA3-206ENST00000475251 SLC1A7O00341 560 aa10.18□□□□□ -0.78
SKA3-206ENST00000475251 PSG2P11465 335 aa10.18□□□□□ -0.78
SKA3-206ENST00000475251 PSKH1P11801 424 aa10.18□□□□□ -0.78
SKA3-206ENST00000475251 COX4I1P13073 169 aa10.18□□□□□ -0.78
SKA3-206ENST00000475251 VDAC2P45880 294 aaPredicted RBP10.18□□□□□ -0.78
SKA3-206ENST00000475251 SLC25A1P53007 311 aa10.18□□□□□ -0.78
SKA3-206ENST00000475251 C8orf82Q6P1X6 216 aaPredicted RBP10.18□□□□□ -0.78
SKA3-206ENST00000475251 PRSS45Q7RTY3 260 aa10.18□□□□□ -0.78
SKA3-206ENST00000475251 THAP5Q7Z6K1 395 aa10.18□□□□□ -0.78
SKA3-206ENST00000475251 CALHM1Q8IU99 346 aa10.18□□□□□ -0.78
SKA3-206ENST00000475251 LINC00471Q8N535 108 aa10.18□□□□□ -0.78
SKA3-206ENST00000475251 ZNF511Q8NB15 262 aa10.18□□□□□ -0.78
SKA3-206ENST00000475251 OR6K6Q8NGW6 343 aa10.18□□□□□ -0.78
SKA3-206ENST00000475251 RNF133Q8WVZ7 376 aa10.18□□□□□ -0.78
SKA3-206ENST00000475251 ZNRF4Q8WWF5 429 aa10.18□□□□□ -0.78
SKA3-206ENST00000475251 PIGCQ92535 297 aa10.18□□□□□ -0.78
SKA3-206ENST00000475251 DPF1Q92782 380 aa10.18□□□□□ -0.78
SKA3-206ENST00000475251 MALSU1Q96EH3 234 aa10.18□□□□□ -0.78
SKA3-206ENST00000475251 SDSLQ96GA7 329 aa10.18□□□□□ -0.78
SKA3-206ENST00000475251 EGLN3Q9H6Z9 239 aa10.18□□□□□ -0.78
SKA3-206ENST00000475251 C19orf12Q9NSK7 152 aa10.18□□□□□ -0.78
SKA3-206ENST00000475251 RASL12Q9NYN1 266 aa10.18□□□□□ -0.78
SKA3-206ENST00000475251 DNAJC27Q9NZQ0 273 aa10.18□□□□□ -0.78
SKA3-206ENST00000475251 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.18□□□□□ -0.78
SKA3-206ENST00000475251 ABCD2Q9UBJ2 740 aa10.18□□□□□ -0.78
SKA3-206ENST00000475251 BAIAP2Q9UQB8 552 aa10.18□□□□□ -0.78
SKA3-206ENST00000475251 DNAH3Q8TD57 4116 aa10.18□□□□□ -0.78
SKA3-206ENST00000475251 RYR3Q15413 4870 aa10.18□□□□□ -0.78
SKA3-206ENST00000475251 IGKV1D-17A0A075B6S4 117 aa10.17□□□□□ -0.78
SKA3-206ENST00000475251 A6NDX4 124 aa10.17□□□□□ -0.78
SKA3-206ENST00000475251 FAM90A8PA6NJQ4 464 aa10.17□□□□□ -0.78
SKA3-206ENST00000475251 IFNGP01579 166 aa10.17□□□□□ -0.78
SKA3-206ENST00000475251 TFF1P04155 84 aa10.17□□□□□ -0.78
SKA3-206ENST00000475251 FABP3P05413 133 aa10.17□□□□□ -0.78
SKA3-206ENST00000475251 COX7A1P24310 79 aa10.17□□□□□ -0.78
SKA3-206ENST00000475251 PAX6P26367 422 aa10.17□□□□□ -0.78
SKA3-206ENST00000475251 DCTDP32321 178 aa10.17□□□□□ -0.78
SKA3-206ENST00000475251 NUDT2P50583 147 aa10.17□□□□□ -0.78
SKA3-206ENST00000475251 GNG3P63215 75 aa10.17□□□□□ -0.78
SKA3-206ENST00000475251 KLHL12Q53G59 568 aa10.17□□□□□ -0.78
SKA3-206ENST00000475251 SHFQ7M4L6 423 aa10.17□□□□□ -0.78
SKA3-206ENST00000475251 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.17□□□□□ -0.78
SKA3-206ENST00000475251 ZNF561Q8N587 486 aa10.17□□□□□ -0.78
SKA3-206ENST00000475251 OR13D1Q8NGV5 346 aa10.17□□□□□ -0.78
SKA3-206ENST00000475251 ITFG2Q969R8 447 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms