RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 BDH1Q02338 343 aa14.22□□□□□ -0.13
SCAF11-206ENST00000474828 HNRNPA0Q13151 305 aaKnown RBP14.22□□□□□ -0.13
SCAF11-206ENST00000474828 ZMYND11Q15326 602 aa14.22□□□□□ -0.13
SCAF11-206ENST00000474828 WDR82Q6UXN9 313 aa14.22□□□□□ -0.13
SCAF11-206ENST00000474828 PEG10Q86TG7 708 aaKnown RBP14.22□□□□□ -0.13
SCAF11-206ENST00000474828 C1orf87Q8N0U7 546 aa14.22□□□□□ -0.13
SCAF11-206ENST00000474828 GCSAMQ8N6F7 178 aa14.22□□□□□ -0.13
SCAF11-206ENST00000474828 MAPK1IP1LQ8NDC0 245 aa14.22□□□□□ -0.13
SCAF11-206ENST00000474828 OR10Z1Q8NGY1 313 aa14.22□□□□□ -0.13
SCAF11-206ENST00000474828 OR10AC1Q8NH08 325 aa14.22□□□□□ -0.13
SCAF11-206ENST00000474828 RGP1Q92546 391 aaPredicted RBP14.22□□□□□ -0.13
SCAF11-206ENST00000474828 MYDGFQ969H8 173 aa14.22□□□□□ -0.13
SCAF11-206ENST00000474828 TMEM165Q9HC07 324 aa14.22□□□□□ -0.13
SCAF11-206ENST00000474828 CHCHD3Q9NX63 227 aaKnown RBP14.22□□□□□ -0.13
SCAF11-206ENST00000474828 TREM2Q9NZC2 230 aa14.22□□□□□ -0.13
SCAF11-206ENST00000474828 RNF7Q9UBF6 113 aa14.22□□□□□ -0.13
SCAF11-206ENST00000474828 TRBV2A0A0J9YWF9 115 aa14.21□□□□□ -0.13
SCAF11-206ENST00000474828 PQLC2LA1A4F0 135 aa14.21□□□□□ -0.13
SCAF11-206ENST00000474828 LRP5LA4QPB2 252 aa14.21□□□□□ -0.13
SCAF11-206ENST00000474828 ANKRD61A6NGH8 418 aa14.21□□□□□ -0.13
SCAF11-206ENST00000474828 F5H0A9 414 aaPredicted RBP14.21□□□□□ -0.13
SCAF11-206ENST00000474828 CD5LO43866 347 aa14.21□□□□□ -0.13
SCAF11-206ENST00000474828 LMX1BO60663 402 aa14.21□□□□□ -0.13
SCAF11-206ENST00000474828 LY6G6DO95868 133 aa14.21□□□□□ -0.13
SCAF11-206ENST00000474828 IGHV2-5P01817 119 aa14.21□□□□□ -0.13
SCAF11-206ENST00000474828 MT-ND2P03891 347 aa14.21□□□□□ -0.13
SCAF11-206ENST00000474828 ACAA1P09110 424 aaPredicted RBP14.21□□□□□ -0.13
SCAF11-206ENST00000474828 IL2RGP31785 369 aa14.21□□□□□ -0.13
SCAF11-206ENST00000474828 MDH2P40926 338 aaKnown RBP14.21□□□□□ -0.13
SCAF11-206ENST00000474828 GZMKP49863 264 aa14.21□□□□□ -0.13
SCAF11-206ENST00000474828 WNT4P56705 351 aa14.21□□□□□ -0.13
SCAF11-206ENST00000474828 UBE2V2Q15819 145 aa14.21□□□□□ -0.13
SCAF11-206ENST00000474828 KRTAP21-3Q3LHN1 58 aa14.21□□□□□ -0.13
SCAF11-206ENST00000474828 ZNF529Q6P280 563 aa14.21□□□□□ -0.13
SCAF11-206ENST00000474828 PARP16Q8N5Y8 322 aa14.21□□□□□ -0.13
SCAF11-206ENST00000474828 OR51A4Q8NGJ6 313 aa14.21□□□□□ -0.13
SCAF11-206ENST00000474828 OR11L1Q8NGX0 322 aa14.21□□□□□ -0.13
SCAF11-206ENST00000474828 OR5AK2Q8NH90 309 aa14.21□□□□□ -0.13
SCAF11-206ENST00000474828 GATAD2BQ8WXI9 593 aa14.21□□□□□ -0.13
SCAF11-206ENST00000474828 SGCDQ92629 289 aa14.21□□□□□ -0.13
SCAF11-206ENST00000474828 SMIM19Q96E16 107 aa14.21□□□□□ -0.13
SCAF11-206ENST00000474828 ADAT3Q96EY9 351 aaPredicted RBP14.21□□□□□ -0.13
SCAF11-206ENST00000474828 RNF170Q96K19 258 aa14.21□□□□□ -0.13
SCAF11-206ENST00000474828 PGLYRP3Q96LB9 341 aa14.21□□□□□ -0.13
SCAF11-206ENST00000474828 CNBD2Q96M20 576 aa14.21□□□□□ -0.13
SCAF11-206ENST00000474828 SMR3AQ99954 134 aa14.21□□□□□ -0.13
SCAF11-206ENST00000474828 PDCD1LG2Q9BQ51 273 aa14.21□□□□□ -0.13
SCAF11-206ENST00000474828 TRIM36Q9NQ86 728 aa14.21□□□□□ -0.13
SCAF11-206ENST00000474828 PTGES3LE9PB15 166 aa14.2□□□□□ -0.14
SCAF11-206ENST00000474828 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.2□□□□□ -0.14
SCAF11-206ENST00000474828 SMAD7O15105 426 aaKnown RBP14.2□□□□□ -0.14
SCAF11-206ENST00000474828 PLPP2O43688 288 aa14.2□□□□□ -0.14
SCAF11-206ENST00000474828 CYB5R3P00387 301 aaPredicted RBP14.2□□□□□ -0.14
SCAF11-206ENST00000474828 MPZP25189 248 aa14.2□□□□□ -0.14
SCAF11-206ENST00000474828 RBMXP38159 391 aaKnown RBP14.2□□□□□ -0.14
SCAF11-206ENST00000474828 TAS2R43P59537 309 aa14.2□□□□□ -0.14
SCAF11-206ENST00000474828 ODF4Q2M2E3 257 aa14.2□□□□□ -0.14
SCAF11-206ENST00000474828 ZNF404Q494X3 552 aa14.2□□□□□ -0.14
SCAF11-206ENST00000474828 AVPI1Q5T686 147 aa14.2□□□□□ -0.14
SCAF11-206ENST00000474828 TEX36Q5VZQ5 186 aa14.2□□□□□ -0.14
SCAF11-206ENST00000474828 PRSS48Q7RTY5 328 aa14.2□□□□□ -0.14
SCAF11-206ENST00000474828 MUC20Q8N307 709 aaPredicted RBP14.2□□□□□ -0.14
SCAF11-206ENST00000474828 ZNF676Q8N7Q3 588 aa14.2□□□□□ -0.14
SCAF11-206ENST00000474828 DNAAF1Q8NEP3 725 aa14.2□□□□□ -0.14
SCAF11-206ENST00000474828 POM121Q96HA1 1249 aa14.2□□□□□ -0.14
SCAF11-206ENST00000474828 HIST1H2AAQ96QV6 131 aa14.2□□□□□ -0.14
SCAF11-206ENST00000474828 YTHDF1Q9BYJ9 559 aaKnown RBP14.2□□□□□ -0.14
SCAF11-206ENST00000474828 GSX1Q9H4S2 264 aaPredicted RBP14.2□□□□□ -0.14
SCAF11-206ENST00000474828 Q9H521 79 aa14.2□□□□□ -0.14
SCAF11-206ENST00000474828 UFSP2Q9NUQ7 469 aa14.2□□□□□ -0.14
SCAF11-206ENST00000474828 C1orf123Q9NWV4 160 aa14.2□□□□□ -0.14
SCAF11-206ENST00000474828 ERGIC3Q9Y282 383 aa14.2□□□□□ -0.14
SCAF11-206ENST00000474828 POLR3KQ9Y2Y1 108 aaPredicted RBP14.2□□□□□ -0.14
SCAF11-206ENST00000474828 CSPG4Q6UVK1 2322 aa14.19□□□□□ -0.14
SCAF11-206ENST00000474828 ABCA2Q9BZC7 2435 aa14.19□□□□□ -0.14
SCAF11-206ENST00000474828 PPIAL4EA0A075B759 164 aa14.19□□□□□ -0.14
SCAF11-206ENST00000474828 IGKV1-9A0A0C4DH69 117 aa14.19□□□□□ -0.14
SCAF11-206ENST00000474828 IGHV3-64DA0A0J9YX35 117 aa14.19□□□□□ -0.14
SCAF11-206ENST00000474828 SRRM5B3KS81 715 aa14.19□□□□□ -0.14
SCAF11-206ENST00000474828 PPIAL4DF5H284 164 aa14.19□□□□□ -0.14
SCAF11-206ENST00000474828 MRPS14O60783 128 aaKnown RBP14.19□□□□□ -0.14
SCAF11-206ENST00000474828 NOS1APO75052 506 aaPredicted RBP14.19□□□□□ -0.14
SCAF11-206ENST00000474828 GATBO75879 557 aaKnown RBP14.19□□□□□ -0.14
SCAF11-206ENST00000474828 GRPP07492 148 aa14.19□□□□□ -0.14
SCAF11-206ENST00000474828 PPIAL4FP0DN26 164 aa14.19□□□□□ -0.14
SCAF11-206ENST00000474828 RPS11P62280 158 aaKnown RBP eCLIP14.19□□□□□ -0.14
SCAF11-206ENST00000474828 CEP78Q5JTW2 689 aa14.19□□□□□ -0.14
SCAF11-206ENST00000474828 PLCXD3Q63HM9 321 aa14.19□□□□□ -0.14
SCAF11-206ENST00000474828 ZNF826PQ6ZT77 177 aa14.19□□□□□ -0.14
SCAF11-206ENST00000474828 SPICQ8N5J4 248 aa14.19□□□□□ -0.14
SCAF11-206ENST00000474828 SCCPDHQ8NBX0 429 aa14.19□□□□□ -0.14
SCAF11-206ENST00000474828 MSI2Q96DH6 328 aaKnown RBP14.19□□□□□ -0.14
SCAF11-206ENST00000474828 MND1Q9BWT6 205 aa14.19□□□□□ -0.14
SCAF11-206ENST00000474828 COMMD4Q9H0A8 199 aa14.19□□□□□ -0.14
SCAF11-206ENST00000474828 ZNF665Q9H7R5 613 aa14.19□□□□□ -0.14
SCAF11-206ENST00000474828 PLEKHA1Q9HB21 404 aa14.19□□□□□ -0.14
SCAF11-206ENST00000474828 PATZ1Q9HBE1 687 aaKnown RBP14.19□□□□□ -0.14
SCAF11-206ENST00000474828 ERVK-18Q9QC07 812 aa14.19□□□□□ -0.14
SCAF11-206ENST00000474828 PPIAL4AQ9Y536 164 aa14.19□□□□□ -0.14
SCAF11-206ENST00000474828 NF1P21359 2839 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms