RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 SLC22A6Q4U2R8 563 aa8.52□□□□□ -1.05
USP39-214ENST00000474572 RNFT1Q5M7Z0 435 aa8.52□□□□□ -1.05
USP39-214ENST00000474572 NSUN5P2Q63ZY6 315 aa8.52□□□□□ -1.05
USP39-214ENST00000474572 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.52□□□□□ -1.05
USP39-214ENST00000474572 DPPA2Q7Z7J5 298 aa8.52□□□□□ -1.05
USP39-214ENST00000474572 SLC25A42Q86VD7 318 aa8.52□□□□□ -1.05
USP39-214ENST00000474572 LHFPL1Q86WI0 220 aa8.52□□□□□ -1.05
USP39-214ENST00000474572 HOGA1Q86XE5 327 aa8.52□□□□□ -1.05
USP39-214ENST00000474572 SLC7A5P1Q8MH63 180 aa8.52□□□□□ -1.05
USP39-214ENST00000474572 ARRDC1Q8N5I2 433 aa8.52□□□□□ -1.05
USP39-214ENST00000474572 CPEB3Q8NE35 698 aaKnown RBP8.52□□□□□ -1.05
USP39-214ENST00000474572 PXT1Q8NFP0 134 aa8.52□□□□□ -1.05
USP39-214ENST00000474572 OR2T35Q8NGX2 323 aa8.52□□□□□ -1.05
USP39-214ENST00000474572 PIGTQ969N2 578 aa8.52□□□□□ -1.05
USP39-214ENST00000474572 APH1AQ96BI3 265 aa8.52□□□□□ -1.05
USP39-214ENST00000474572 POM121Q96HA1 1249 aa8.52□□□□□ -1.05
USP39-214ENST00000474572 ARHGAP5-AS1Q96IT6 56 aa8.52□□□□□ -1.05
USP39-214ENST00000474572 PECRQ9BY49 303 aa8.52□□□□□ -1.05
USP39-214ENST00000474572 POFUT1Q9H488 388 aa8.52□□□□□ -1.05
USP39-214ENST00000474572 SPRR3Q9UBC9 169 aa8.52□□□□□ -1.05
USP39-214ENST00000474572 OPN4Q9UHM6 478 aa8.52□□□□□ -1.05
USP39-214ENST00000474572 GPR179Q6PRD1 2367 aa8.52□□□□□ -1.05
USP39-214ENST00000474572 ZNF816-ZNF321PA0A0X1KG74 233 aa8.51□□□□□ -1.05
USP39-214ENST00000474572 PLSCR5A0PG75 271 aa8.51□□□□□ -1.05
USP39-214ENST00000474572 HMSDA8MTL9 139 aa8.51□□□□□ -1.05
USP39-214ENST00000474572 SERPINE3A8MV23 424 aa8.51□□□□□ -1.05
USP39-214ENST00000474572 FCER2P06734 321 aa8.51□□□□□ -1.05
USP39-214ENST00000474572 HRH1P35367 487 aa8.51□□□□□ -1.05
USP39-214ENST00000474572 FUT6P51993 359 aa8.51□□□□□ -1.05
USP39-214ENST00000474572 FOXG1P55316 489 aaPredicted RBP8.51□□□□□ -1.05
USP39-214ENST00000474572 PER3P56645 1201 aa8.51□□□□□ -1.05
USP39-214ENST00000474572 CXADRP78310 365 aa8.51□□□□□ -1.05
USP39-214ENST00000474572 ARG2P78540 354 aa8.51□□□□□ -1.05
USP39-214ENST00000474572 MICBQ29980 383 aa8.51□□□□□ -1.05
USP39-214ENST00000474572 LY6G6FQ5SQ64 297 aa8.51□□□□□ -1.05
USP39-214ENST00000474572 OR52W1Q6IF63 320 aa8.51□□□□□ -1.05
USP39-214ENST00000474572 PLXDC2Q6UX71 529 aa8.51□□□□□ -1.05
USP39-214ENST00000474572 CHMP1BQ7LBR1 199 aa8.51□□□□□ -1.05
USP39-214ENST00000474572 NUFIP2Q7Z417 695 aaKnown RBP8.51□□□□□ -1.05
USP39-214ENST00000474572 PEG10Q86TG7 708 aaKnown RBP8.51□□□□□ -1.05
USP39-214ENST00000474572 C12orf45Q8N5I9 185 aaPredicted RBP8.51□□□□□ -1.05
USP39-214ENST00000474572 Q8NFD4 153 aa8.51□□□□□ -1.05
USP39-214ENST00000474572 OR51T1Q8NGJ9 327 aa8.51□□□□□ -1.05
USP39-214ENST00000474572 OR5D18Q8NGL1 313 aa8.51□□□□□ -1.05
USP39-214ENST00000474572 NPRL2Q8WTW4 380 aa8.51□□□□□ -1.05
USP39-214ENST00000474572 FBXW5Q969U6 566 aa8.51□□□□□ -1.05
USP39-214ENST00000474572 PRRG4Q9BZD6 226 aa8.51□□□□□ -1.05
USP39-214ENST00000474572 METTL9Q9H1A3 318 aa8.51□□□□□ -1.05
USP39-214ENST00000474572 CALHM2Q9HA72 323 aa8.51□□□□□ -1.05
USP39-214ENST00000474572 SLC23A1Q9UHI7 598 aa8.51□□□□□ -1.05
USP39-214ENST00000474572 HSF4Q9ULV5 492 aa8.51□□□□□ -1.05
USP39-214ENST00000474572 LOC100509620A0A075B734 347 aa8.5□□□□□ -1.05
USP39-214ENST00000474572 ZNF503-AS2A6NEH8 195 aa8.5□□□□□ -1.05
USP39-214ENST00000474572 A6NL46 340 aa8.5□□□□□ -1.05
USP39-214ENST00000474572 FIGNL2A6NMB9 653 aa8.5□□□□□ -1.05
USP39-214ENST00000474572 OR2AT4A6NND4 320 aa8.5□□□□□ -1.05
USP39-214ENST00000474572 F5H5P2 479 aa8.5□□□□□ -1.05
USP39-214ENST00000474572 CEACAM4O75871 244 aa8.5□□□□□ -1.05
USP39-214ENST00000474572 NRASP01111 189 aa8.5□□□□□ -1.05
USP39-214ENST00000474572 IGHV3-9P01782 118 aa8.5□□□□□ -1.05
USP39-214ENST00000474572 WT1P19544 449 aaPredicted RBP8.5□□□□□ -1.05
USP39-214ENST00000474572 SERPINA2P20848 420 aa8.5□□□□□ -1.05
USP39-214ENST00000474572 BLVRBP30043 206 aaPredicted RBP8.5□□□□□ -1.05
USP39-214ENST00000474572 AGTR1P30556 359 aa8.5□□□□□ -1.05
USP39-214ENST00000474572 ARR3P36575 388 aa8.5□□□□□ -1.05
USP39-214ENST00000474572 RBP2P50120 134 aa8.5□□□□□ -1.05
USP39-214ENST00000474572 MTCP1P56278 107 aa8.5□□□□□ -1.05
USP39-214ENST00000474572 H2BFSP57053 126 aa8.5□□□□□ -1.05
USP39-214ENST00000474572 UBE2MP61081 183 aaKnown RBP8.5□□□□□ -1.05
USP39-214ENST00000474572 TSPAN5P62079 268 aa8.5□□□□□ -1.05
USP39-214ENST00000474572 SRSF6Q13247 344 aaKnown RBP8.5□□□□□ -1.05
USP39-214ENST00000474572 DHRS2Q13268 280 aa8.5□□□□□ -1.05
USP39-214ENST00000474572 C3AR1Q16581 482 aa8.5□□□□□ -1.05
USP39-214ENST00000474572 NKPD1Q17RQ9 610 aa8.5□□□□□ -1.05
USP39-214ENST00000474572 LPCAT3Q6P1A2 487 aa8.5□□□□□ -1.05
USP39-214ENST00000474572 LYG2Q86SG7 212 aa8.5□□□□□ -1.05
USP39-214ENST00000474572 VASH2Q86V25 355 aa8.5□□□□□ -1.05
USP39-214ENST00000474572 CD163Q86VB7 1156 aa8.5□□□□□ -1.05
USP39-214ENST00000474572 FTMTQ8N4E7 242 aa8.5□□□□□ -1.05
USP39-214ENST00000474572 PRSS33Q8NF86 280 aa8.5□□□□□ -1.05
USP39-214ENST00000474572 OR10K1Q8NGX5 313 aa8.5□□□□□ -1.05
USP39-214ENST00000474572 OR4K15Q8NH41 348 aa8.5□□□□□ -1.05
USP39-214ENST00000474572 MRPS24Q96EL2 167 aaKnown RBP8.5□□□□□ -1.05
USP39-214ENST00000474572 BORCS8Q96FH0 119 aa8.5□□□□□ -1.05
USP39-214ENST00000474572 WDR89Q96FK6 387 aaPredicted RBP8.5□□□□□ -1.05
USP39-214ENST00000474572 CYYR1Q96J86 154 aa8.5□□□□□ -1.05
USP39-214ENST00000474572 POM121L2Q96KW2 1035 aa8.5□□□□□ -1.05
USP39-214ENST00000474572 ZNF75AQ96N20 296 aa8.5□□□□□ -1.05
USP39-214ENST00000474572 S100A13Q99584 98 aa8.5□□□□□ -1.05
USP39-214ENST00000474572 REPIN1Q9BWE0 567 aaKnown RBP8.5□□□□□ -1.05
USP39-214ENST00000474572 OPA3Q9H6K4 179 aa8.5□□□□□ -1.05
USP39-214ENST00000474572 FN3KRPQ9HA64 309 aa8.5□□□□□ -1.05
USP39-214ENST00000474572 CLCF1Q9UBD9 225 aa8.5□□□□□ -1.05
USP39-214ENST00000474572 KCNN3Q9UGI6 736 aa8.5□□□□□ -1.05
USP39-214ENST00000474572 OSGIN2Q9Y236 505 aa8.5□□□□□ -1.05
USP39-214ENST00000474572 IGKV1-12A0A0C4DH73 117 aa8.49□□□□□ -1.05
USP39-214ENST00000474572 C9orf170A2RU37 121 aa8.49□□□□□ -1.05
USP39-214ENST00000474572 GOSR2O14653 212 aa8.49□□□□□ -1.05
USP39-214ENST00000474572 MSTNO14793 375 aa8.49□□□□□ -1.05
USP39-214ENST00000474572 NKX2-8O15522 239 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms