RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 ABCB9Q9NP78 766 aa15.29■□□□□ 0.04
COL7A1-209ENST00000474432 SNTG1Q9NSN8 517 aa15.29■□□□□ 0.04
COL7A1-209ENST00000474432 KIF17Q9P2E2 1029 aa15.29■□□□□ 0.04
COL7A1-209ENST00000474432 KPTNQ9Y664 436 aa15.29■□□□□ 0.04
COL7A1-209ENST00000474432 ZNF816-ZNF321PA0A0X1KG74 233 aa15.28■□□□□ 0.04
COL7A1-209ENST00000474432 SPRY1O43609 319 aaPredicted RBP15.28■□□□□ 0.04
COL7A1-209ENST00000474432 ZNF254O75437 659 aa15.28■□□□□ 0.04
COL7A1-209ENST00000474432 TTRP02766 147 aa15.28■□□□□ 0.04
COL7A1-209ENST00000474432 MDKP21741 143 aaPredicted RBP15.28■□□□□ 0.04
COL7A1-209ENST00000474432 OMGP23515 440 aa15.28■□□□□ 0.04
COL7A1-209ENST00000474432 MAP2K3P46734 347 aa15.28■□□□□ 0.04
COL7A1-209ENST00000474432 GPM6AP51674 278 aa15.28■□□□□ 0.04
COL7A1-209ENST00000474432 RELBQ01201 579 aa15.28■□□□□ 0.04
COL7A1-209ENST00000474432 DGUOKQ16854 277 aa15.28■□□□□ 0.04
COL7A1-209ENST00000474432 CDONQ4KMG0 1287 aa15.28■□□□□ 0.04
COL7A1-209ENST00000474432 SHISA2Q6UWI4 295 aa15.28■□□□□ 0.04
COL7A1-209ENST00000474432 SLC36A1Q7Z2H8 476 aa15.28■□□□□ 0.04
COL7A1-209ENST00000474432 Q8N7P7 452 aa15.28■□□□□ 0.04
COL7A1-209ENST00000474432 TCEANCQ8N8B7 351 aa15.28■□□□□ 0.04
COL7A1-209ENST00000474432 C8orf46Q8TAG6 207 aa15.28■□□□□ 0.04
COL7A1-209ENST00000474432 OR51E1Q8TCB6 317 aa15.28■□□□□ 0.04
COL7A1-209ENST00000474432 GATAD2BQ8WXI9 593 aa15.28■□□□□ 0.04
COL7A1-209ENST00000474432 ZDHHC16Q969W1 377 aa15.28■□□□□ 0.04
COL7A1-209ENST00000474432 TMIGD2Q96BF3 282 aa15.28■□□□□ 0.04
COL7A1-209ENST00000474432 DCTN5Q9BTE1 182 aa15.28■□□□□ 0.04
COL7A1-209ENST00000474432 TEX12Q9BXU0 123 aa15.28■□□□□ 0.04
COL7A1-209ENST00000474432 MROQ9BYG7 248 aa15.28■□□□□ 0.04
COL7A1-209ENST00000474432 CHIAQ9BZP6 476 aa15.28■□□□□ 0.04
COL7A1-209ENST00000474432 GABARAPL1Q9H0R8 117 aa15.28■□□□□ 0.04
COL7A1-209ENST00000474432 DNTTIP1Q9H147 329 aa15.28■□□□□ 0.04
COL7A1-209ENST00000474432 ADGRL4Q9HBW9 690 aa15.28■□□□□ 0.04
COL7A1-209ENST00000474432 GPR84Q9NQS5 396 aa15.28■□□□□ 0.04
COL7A1-209ENST00000474432 ACOXLQ9NUZ1 547 aa15.28■□□□□ 0.04
COL7A1-209ENST00000474432 NUFIP1Q9UHK0 495 aaKnown RBP15.28■□□□□ 0.04
COL7A1-209ENST00000474432 FAM181BA6NEQ2 426 aa15.27■□□□□ 0.04
COL7A1-209ENST00000474432 DLX1P56177 255 aa15.27■□□□□ 0.04
COL7A1-209ENST00000474432 IL13RA1P78552 427 aa15.27■□□□□ 0.04
COL7A1-209ENST00000474432 IKZF1Q13422 519 aa15.27■□□□□ 0.04
COL7A1-209ENST00000474432 CEACAM21Q3KPI0 293 aa15.27■□□□□ 0.04
COL7A1-209ENST00000474432 CEP78Q5JTW2 689 aa15.27■□□□□ 0.04
COL7A1-209ENST00000474432 LCN1P1Q5VSP4 162 aa15.27■□□□□ 0.04
COL7A1-209ENST00000474432 VMO1Q7Z5L0 202 aa15.27■□□□□ 0.04
COL7A1-209ENST00000474432 AMIGO2Q86SJ2 522 aa15.27■□□□□ 0.04
COL7A1-209ENST00000474432 TMEM163Q8TC26 289 aa15.27■□□□□ 0.04
COL7A1-209ENST00000474432 ASB17Q8WXJ9 295 aa15.27■□□□□ 0.04
COL7A1-209ENST00000474432 DMRTB1Q96MA1 342 aa15.27■□□□□ 0.04
COL7A1-209ENST00000474432 APOL4Q9BPW4 351 aa15.27■□□□□ 0.04
COL7A1-209ENST00000474432 KRT84Q9NSB2 600 aa15.27■□□□□ 0.04
COL7A1-209ENST00000474432 ZNF222Q9UK12 451 aa15.27■□□□□ 0.04
COL7A1-209ENST00000474432 IGKV1D-17A0A075B6S4 117 aa15.26■□□□□ 0.03
COL7A1-209ENST00000474432 A0A0U1RQK1 487 aa15.26■□□□□ 0.03
COL7A1-209ENST00000474432 POM121CA8CG34 1229 aa15.26■□□□□ 0.03
COL7A1-209ENST00000474432 ZNF732B4DXR9 585 aa15.26■□□□□ 0.03
COL7A1-209ENST00000474432 G3V2T6 193 aa15.26■□□□□ 0.03
COL7A1-209ENST00000474432 NDUFB3O43676 98 aa15.26■□□□□ 0.03
COL7A1-209ENST00000474432 ATP6V1B1P15313 513 aa15.26■□□□□ 0.03
COL7A1-209ENST00000474432 POLR2IP36954 125 aaKnown RBP15.26■□□□□ 0.03
COL7A1-209ENST00000474432 GNG3P63215 75 aa15.26■□□□□ 0.03
COL7A1-209ENST00000474432 PRB3Q04118 309 aaPredicted RBP15.26■□□□□ 0.03
COL7A1-209ENST00000474432 PRR31Q5SQ13 230 aa15.26■□□□□ 0.03
COL7A1-209ENST00000474432 NXNL2Q5VZ03 156 aa15.26■□□□□ 0.03
COL7A1-209ENST00000474432 KCTD8Q6ZWB6 473 aa15.26■□□□□ 0.03
COL7A1-209ENST00000474432 PDZD9Q8IXQ8 264 aa15.26■□□□□ 0.03
COL7A1-209ENST00000474432 TMEM86BQ8N661 226 aa15.26■□□□□ 0.03
COL7A1-209ENST00000474432 AQP3Q92482 292 aa15.26■□□□□ 0.03
COL7A1-209ENST00000474432 TNFRSF14Q92956 283 aa15.26■□□□□ 0.03
COL7A1-209ENST00000474432 ITFG2Q969R8 447 aa15.26■□□□□ 0.03
COL7A1-209ENST00000474432 FAM71F1Q96KD3 344 aaPredicted RBP15.26■□□□□ 0.03
COL7A1-209ENST00000474432 CNN2Q99439 309 aaKnown RBP15.26■□□□□ 0.03
COL7A1-209ENST00000474432 TNFRSF19Q9NS68 423 aa15.26■□□□□ 0.03
COL7A1-209ENST00000474432 MRM2Q9UI43 246 aaKnown RBP15.26■□□□□ 0.03
COL7A1-209ENST00000474432 MMP24Q9Y5R2 645 aa15.26■□□□□ 0.03
COL7A1-209ENST00000474432 TMEM14AQ9Y6G1 99 aa15.26■□□□□ 0.03
COL7A1-209ENST00000474432 MEGF8Q7Z7M0 2845 aa15.25■□□□□ 0.03
COL7A1-209ENST00000474432 A0A1B0GTI1 187 aa15.25■□□□□ 0.03
COL7A1-209ENST00000474432 GPR37O15354 613 aa15.25■□□□□ 0.03
COL7A1-209ENST00000474432 SIGLEC5O15389 551 aa15.25■□□□□ 0.03
COL7A1-209ENST00000474432 ACAA1P09110 424 aaPredicted RBP15.25■□□□□ 0.03
COL7A1-209ENST00000474432 FAHP16930 419 aa15.25■□□□□ 0.03
COL7A1-209ENST00000474432 RIDAP52758 137 aaKnown RBP15.25■□□□□ 0.03
COL7A1-209ENST00000474432 CXCR4P61073 352 aa15.25■□□□□ 0.03
COL7A1-209ENST00000474432 ZBTB37Q5TC79 503 aa15.25■□□□□ 0.03
COL7A1-209ENST00000474432 TMEM42Q69YG0 159 aa15.25■□□□□ 0.03
COL7A1-209ENST00000474432 ZNF322Q6U7Q0 402 aaPredicted RBP15.25■□□□□ 0.03
COL7A1-209ENST00000474432 METAP1DQ6UB28 335 aaPredicted RBP15.25■□□□□ 0.03
COL7A1-209ENST00000474432 FIP1L1Q6UN15 594 aaKnown RBP15.25■□□□□ 0.03
COL7A1-209ENST00000474432 Q6ZSR3 168 aa15.25■□□□□ 0.03
COL7A1-209ENST00000474432 LDLRAD3Q86YD5 345 aa15.25■□□□□ 0.03
COL7A1-209ENST00000474432 SLC35F2Q8IXU6 374 aa15.25■□□□□ 0.03
COL7A1-209ENST00000474432 KIR3DL3Q8N743 410 aa15.25■□□□□ 0.03
COL7A1-209ENST00000474432 OR5A2Q8NGI9 324 aa15.25■□□□□ 0.03
COL7A1-209ENST00000474432 FAM81AQ8TBF8 368 aa15.25■□□□□ 0.03
COL7A1-209ENST00000474432 LRTOMTQ8WZ04 291 aa15.25■□□□□ 0.03
COL7A1-209ENST00000474432 IL4I1Q96RQ9 567 aa15.25■□□□□ 0.03
COL7A1-209ENST00000474432 ZNF696Q9H7X3 374 aa15.25■□□□□ 0.03
COL7A1-209ENST00000474432 C1RLQ9NZP8 487 aa15.25■□□□□ 0.03
COL7A1-209ENST00000474432 NLKQ9UBE8 527 aa15.25■□□□□ 0.03
COL7A1-209ENST00000474432 DNAJB11Q9UBS4 358 aa15.25■□□□□ 0.03
COL7A1-209ENST00000474432 MAB21L2Q9Y586 359 aa15.25■□□□□ 0.03
COL7A1-209ENST00000474432 AP4S1Q9Y587 144 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms