RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 EWSR1Q01844 656 aaKnown RBP eCLIP3.03□□□□□ -1.92
UBR3-208ENST00000474426 PPP1R1AQ13522 171 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 ZNF266Q14584 549 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 TMEM52BQ4KMG9 183 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 B3GNTL1Q67FW5 361 aaPredicted RBP3.03□□□□□ -1.92
UBR3-208ENST00000474426 NEGR1Q7Z3B1 354 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 TMPRSS11BQ86T26 416 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 LRRTM1Q86UE6 522 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 CA13Q8N1Q1 262 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 ZNF611Q8N823 705 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 OR1F12Q8NHA8 337 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 MZB1Q8WU39 189 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 SKA2Q8WVK7 121 aaPredicted RBP3.03□□□□□ -1.92
UBR3-208ENST00000474426 TIMD4Q96H15 378 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 GRAMD2BQ96HH9 432 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 MIEN1Q9BRT3 115 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 A4GALTQ9NPC4 353 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 ABCC6O95255 1503 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 PPLO60437 1756 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 A0A0A6YYD5 115 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 GXYLT2A0PJZ3 443 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 FABP5P3A8MUU1 101 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 SIX6O95475 246 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 GRPP07492 148 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 DANCRP0C864 163 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 LAMP1P11279 417 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 HOXB9P17482 250 aaPredicted RBP3.03□□□□□ -1.92
UBR3-208ENST00000474426 RPL12P30050 165 aaKnown RBP3.03□□□□□ -1.92
UBR3-208ENST00000474426 GFI1BQ5VTD9 330 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 DNAJC24Q6P3W2 148 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 ZNF773Q6PK81 442 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 ZNF705AQ6ZN79 300 aaPredicted RBP3.03□□□□□ -1.92
UBR3-208ENST00000474426 SSH2Q76I76 1423 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 FA2HQ7L5A8 372 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 SLC39A11Q8N1S5 342 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 ABHD12Q8N2K0 398 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 ZFP41Q8N8Y5 198 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 VN1R2Q8NFZ6 395 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 OR4F6Q8NGB9 312 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 OR1J2Q8NGS2 313 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 Q96MF0 132 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 IP6K3Q96PC2 410 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 HIST1H2BLQ99880 126 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 NAA38Q9BRA0 125 aaKnown RBP3.03□□□□□ -1.92
UBR3-208ENST00000474426 DOHHQ9BU89 302 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 DUSP23Q9BVJ7 150 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 C19orf24Q9BVV8 132 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 C1QTNF4Q9BXJ3 329 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 SMIM3Q9BZL3 60 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 FBXO6Q9NRD1 293 aaPredicted RBP3.03□□□□□ -1.92
UBR3-208ENST00000474426 IDI2-AS1Q9NZ38 188 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 GNG12Q9UBI6 72 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 IKZF2Q9UKS7 526 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 SNX10Q9Y5X0 201 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 A0A1W2PS29 197 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 RNF212BA8MTL3 300 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 E9PLN8 166 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 H0YL77 283 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 DLL1O00548 723 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 EIF4E2O60573 245 aaKnown RBP3.03□□□□□ -1.92
UBR3-208ENST00000474426 SLC25A12O75746 678 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 SEMA4FO95754 770 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 PRNPP04156 253 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 CHRM4P08173 479 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 ADRA2AP08913 450 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 SMIM17P0DL12 118 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 HKR1P10072 659 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 FABP4P15090 132 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 PSMB1P20618 241 aaKnown RBP3.03□□□□□ -1.92
UBR3-208ENST00000474426 GCSHP23434 173 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 SRIP30626 198 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 SULT1A1P50225 295 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 SULT1A2P50226 295 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 IL13RA2Q14627 380 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 BATFQ16520 125 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 SFXN4Q6P4A7 337 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 Q6ZVH6 145 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 KIR3DL3Q8N743 410 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 OR7A2PQ8NGA2 310 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 OR5AP2Q8NGF4 316 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 OR5B3Q8NH48 314 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 SIGLEC12Q96PQ1 595 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 CLCC1Q96S66 551 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 ASF1BQ9NVP2 202 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 HRASLS2Q9NWW9 162 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 KIAA1456Q9P272 454 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 POMT2Q9UKY4 750 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 BOKQ9UMX3 212 aaPredicted RBP3.03□□□□□ -1.92
UBR3-208ENST00000474426 CHST2Q9Y4C5 530 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 SLIT3O75094 1523 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 CASKIN1Q8WXD9 1431 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 TTC3P53804 2025 aa3.03□□□□□ -1.93
UBR3-208ENST00000474426 PRSS51A0A1B0GVH4 220 aa3.03□□□□□ -1.93
UBR3-208ENST00000474426 WDR27A2RRH5 827 aa3.03□□□□□ -1.93
UBR3-208ENST00000474426 IFITM5A6NNB3 132 aa3.03□□□□□ -1.93
UBR3-208ENST00000474426 SULT2B1O00204 365 aa3.03□□□□□ -1.93
UBR3-208ENST00000474426 RFXAPO00287 272 aa3.03□□□□□ -1.93
UBR3-208ENST00000474426 ZIC3O60481 467 aa3.03□□□□□ -1.93
UBR3-208ENST00000474426 CTSKP43235 329 aa3.03□□□□□ -1.93
UBR3-208ENST00000474426 OR3A2P47893 321 aa3.03□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms