RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 PIGLQ9Y2B2 252 aa14.87□□□□□ -0.03
UPF3A-203ENST00000474056 AKR7A2O43488 359 aa14.86□□□□□ -0.03
UPF3A-203ENST00000474056 DHRS3O75911 302 aa14.86□□□□□ -0.03
UPF3A-203ENST00000474056 AMY2BP19961 511 aa14.86□□□□□ -0.03
UPF3A-203ENST00000474056 CDC42P60953 191 aa14.86□□□□□ -0.03
UPF3A-203ENST00000474056 UBA52P62987 128 aaKnown RBP14.86□□□□□ -0.03
UPF3A-203ENST00000474056 ACTG1P63261 375 aa14.86□□□□□ -0.03
UPF3A-203ENST00000474056 BTN2A1Q7KYR7 527 aa14.86□□□□□ -0.03
UPF3A-203ENST00000474056 DOK3Q7L591 496 aa14.86□□□□□ -0.03
UPF3A-203ENST00000474056 THAP5Q7Z6K1 395 aa14.86□□□□□ -0.03
UPF3A-203ENST00000474056 ELMOD2Q8IZ81 293 aa14.86□□□□□ -0.03
UPF3A-203ENST00000474056 FAM216BQ8N7L0 139 aa14.86□□□□□ -0.03
UPF3A-203ENST00000474056 ST8SIA4Q92187 359 aa14.86□□□□□ -0.03
UPF3A-203ENST00000474056 HIST1H2AAQ96QV6 131 aa14.86□□□□□ -0.03
UPF3A-203ENST00000474056 SNTG1Q9NSN8 517 aa14.86□□□□□ -0.03
UPF3A-203ENST00000474056 USE1Q9NZ43 259 aa14.86□□□□□ -0.03
UPF3A-203ENST00000474056 OR52A1Q9UKL2 312 aa14.86□□□□□ -0.03
UPF3A-203ENST00000474056 SLC22A13Q9Y226 551 aa14.86□□□□□ -0.03
UPF3A-203ENST00000474056 A0A1W2PQL4 384 aaPredicted RBP14.85□□□□□ -0.03
UPF3A-203ENST00000474056 ZNF732B4DXR9 585 aa14.85□□□□□ -0.03
UPF3A-203ENST00000474056 RHBDL1O75783 438 aa14.85□□□□□ -0.03
UPF3A-203ENST00000474056 RPP14O95059 124 aaKnown RBP14.85□□□□□ -0.03
UPF3A-203ENST00000474056 SFTPBP07988 381 aa14.85□□□□□ -0.03
UPF3A-203ENST00000474056 MMP9P14780 707 aa14.85□□□□□ -0.03
UPF3A-203ENST00000474056 CEACAM21Q3KPI0 293 aa14.85□□□□□ -0.03
UPF3A-203ENST00000474056 BCL2L15Q5TBC7 163 aa14.85□□□□□ -0.03
UPF3A-203ENST00000474056 ZBTB37Q5TC79 503 aa14.85□□□□□ -0.03
UPF3A-203ENST00000474056 PLCXD3Q63HM9 321 aa14.85□□□□□ -0.03
UPF3A-203ENST00000474056 STUMQ69YW2 141 aa14.85□□□□□ -0.03
UPF3A-203ENST00000474056 MOB3CQ70IA8 216 aa14.85□□□□□ -0.03
UPF3A-203ENST00000474056 YIPF7Q8N8F6 280 aa14.85□□□□□ -0.03
UPF3A-203ENST00000474056 OR5T2Q8NGG2 359 aa14.85□□□□□ -0.03
UPF3A-203ENST00000474056 UBE2FQ969M7 185 aa14.85□□□□□ -0.03
UPF3A-203ENST00000474056 C12orf43Q96C57 262 aaKnown RBP14.85□□□□□ -0.03
UPF3A-203ENST00000474056 C1orf147Q96MC9 270 aaPredicted RBP14.85□□□□□ -0.03
UPF3A-203ENST00000474056 DUX5Q96PT3 197 aa14.85□□□□□ -0.03
UPF3A-203ENST00000474056 RAB3IPQ96QF0 476 aaPredicted RBP14.85□□□□□ -0.03
UPF3A-203ENST00000474056 OR51I2Q9H344 312 aa14.85□□□□□ -0.03
UPF3A-203ENST00000474056 DNAJB11Q9UBS4 358 aa14.85□□□□□ -0.03
UPF3A-203ENST00000474056 ENPP5Q9UJA9 477 aa14.85□□□□□ -0.03
UPF3A-203ENST00000474056 SNX5Q9Y5X3 404 aa14.85□□□□□ -0.03
UPF3A-203ENST00000474056 A0A1B0GTI1 187 aa14.84□□□□□ -0.03
UPF3A-203ENST00000474056 DNAJC9-AS1A6NH13 148 aa14.84□□□□□ -0.03
UPF3A-203ENST00000474056 ZNF879B4DU55 563 aa14.84□□□□□ -0.03
UPF3A-203ENST00000474056 E9PQ18 207 aa14.84□□□□□ -0.03
UPF3A-203ENST00000474056 P2RY10O00398 339 aa14.84□□□□□ -0.03
UPF3A-203ENST00000474056 MTRF1O75570 445 aaKnown RBP14.84□□□□□ -0.03
UPF3A-203ENST00000474056 TFF1P04155 84 aa14.84□□□□□ -0.03
UPF3A-203ENST00000474056 OR2T7P0C7T2 308 aa14.84□□□□□ -0.03
UPF3A-203ENST00000474056 SELLP14151 372 aa14.84□□□□□ -0.03
UPF3A-203ENST00000474056 ALDH3A2P51648 485 aa14.84□□□□□ -0.03
UPF3A-203ENST00000474056 GNG3P63215 75 aa14.84□□□□□ -0.03
UPF3A-203ENST00000474056 ZIK1Q3SY52 487 aaPredicted RBP14.84□□□□□ -0.03
UPF3A-203ENST00000474056 RBMS3Q6XE24 437 aaKnown RBP14.84□□□□□ -0.03
UPF3A-203ENST00000474056 BRD3OSQ6XYD6 125 aa14.84□□□□□ -0.03
UPF3A-203ENST00000474056 C9orf139Q6ZV77 190 aa14.84□□□□□ -0.03
UPF3A-203ENST00000474056 SLC36A1Q7Z2H8 476 aa14.84□□□□□ -0.03
UPF3A-203ENST00000474056 OR10H4Q8NGA5 316 aa14.84□□□□□ -0.03
UPF3A-203ENST00000474056 OR5A2Q8NGI9 324 aa14.84□□□□□ -0.03
UPF3A-203ENST00000474056 OR2T27Q8NH04 317 aa14.84□□□□□ -0.03
UPF3A-203ENST00000474056 ITFG2Q969R8 447 aa14.84□□□□□ -0.03
UPF3A-203ENST00000474056 HRASLS5Q96KN8 279 aa14.84□□□□□ -0.03
UPF3A-203ENST00000474056 TBX15Q96SF7 602 aa14.84□□□□□ -0.03
UPF3A-203ENST00000474056 PCGF1Q9BSM1 259 aa14.84□□□□□ -0.03
UPF3A-203ENST00000474056 ORC6Q9Y5N6 252 aa14.84□□□□□ -0.03
UPF3A-203ENST00000474056 V9GYS6 101 aa14.84□□□□□ -0.03
UPF3A-203ENST00000474056 MDFIC2A0A1B0GVS7 189 aa14.83□□□□□ -0.04
UPF3A-203ENST00000474056 EBAG9O00559 213 aa14.83□□□□□ -0.04
UPF3A-203ENST00000474056 NRASP01111 189 aa14.83□□□□□ -0.04
UPF3A-203ENST00000474056 KRT8P05787 483 aa14.83□□□□□ -0.04
UPF3A-203ENST00000474056 LIPFP07098 398 aa14.83□□□□□ -0.04
UPF3A-203ENST00000474056 GLRA1P23415 457 aa14.83□□□□□ -0.04
UPF3A-203ENST00000474056 IKZF1Q13422 519 aa14.83□□□□□ -0.04
UPF3A-203ENST00000474056 TMED1Q13445 227 aa14.83□□□□□ -0.04
UPF3A-203ENST00000474056 ODF4Q2M2E3 257 aa14.83□□□□□ -0.04
UPF3A-203ENST00000474056 ZNF684Q5T5D7 378 aa14.83□□□□□ -0.04
UPF3A-203ENST00000474056 C12orf54Q6X4T0 127 aa14.83□□□□□ -0.04
UPF3A-203ENST00000474056 CBR4Q8N4T8 237 aa14.83□□□□□ -0.04
UPF3A-203ENST00000474056 PNLDC1Q8NA58 520 aaKnown RBP14.83□□□□□ -0.04
UPF3A-203ENST00000474056 OR14K1Q8NGZ2 314 aa14.83□□□□□ -0.04
UPF3A-203ENST00000474056 SIRPDQ9H106 197 aa14.83□□□□□ -0.04
UPF3A-203ENST00000474056 GPR173Q9NS66 373 aa14.83□□□□□ -0.04
UPF3A-203ENST00000474056 IMPAD1Q9NX62 359 aa14.83□□□□□ -0.04
UPF3A-203ENST00000474056 TMEM89A2RUT3 159 aa14.82□□□□□ -0.04
UPF3A-203ENST00000474056 A6NIN4 97 aa14.82□□□□□ -0.04
UPF3A-203ENST00000474056 METTL15A6NJ78 407 aa14.82□□□□□ -0.04
UPF3A-203ENST00000474056 OR5B21A6NL26 309 aa14.82□□□□□ -0.04
UPF3A-203ENST00000474056 ENTPD6O75354 484 aa14.82□□□□□ -0.04
UPF3A-203ENST00000474056 TOX4O94842 621 aa14.82□□□□□ -0.04
UPF3A-203ENST00000474056 ECDO95905 644 aaPredicted RBP14.82□□□□□ -0.04
UPF3A-203ENST00000474056 PRTN3P24158 256 aa14.82□□□□□ -0.04
UPF3A-203ENST00000474056 ATP6V1E1P36543 226 aa14.82□□□□□ -0.04
UPF3A-203ENST00000474056 TGM4P49221 684 aa14.82□□□□□ -0.04
UPF3A-203ENST00000474056 ARF6P62330 175 aa14.82□□□□□ -0.04
UPF3A-203ENST00000474056 ZNF85Q03923 595 aa14.82□□□□□ -0.04
UPF3A-203ENST00000474056 BAMBIQ13145 260 aa14.82□□□□□ -0.04
UPF3A-203ENST00000474056 ATPAF1Q5TC12 328 aaPredicted RBP14.82□□□□□ -0.04
UPF3A-203ENST00000474056 GPR157Q5UAW9 335 aa14.82□□□□□ -0.04
UPF3A-203ENST00000474056 METTL11BQ5VVY1 283 aa14.82□□□□□ -0.04
UPF3A-203ENST00000474056 RUSC1-AS1Q66K80 236 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms