RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 LOC100289279A0A1B0GTE1 492 aa8.8□□□□□ -1
PRPF38A-202ENST00000474048 METTL21EPA6NDL7 271 aa8.8□□□□□ -1
PRPF38A-202ENST00000474048 A6NLC8 198 aa8.8□□□□□ -1
PRPF38A-202ENST00000474048 TMEM210A6NLX4 147 aa8.8□□□□□ -1
PRPF38A-202ENST00000474048 ZNF732B4DXR9 585 aa8.8□□□□□ -1
PRPF38A-202ENST00000474048 TRAPPC2LH3BP13 241 aa8.8□□□□□ -1
PRPF38A-202ENST00000474048 J3QKU1 62 aa8.8□□□□□ -1
PRPF38A-202ENST00000474048 M0R233 179 aa8.8□□□□□ -1
PRPF38A-202ENST00000474048 ZNF780AO75290 641 aaPredicted RBP8.8□□□□□ -1
PRPF38A-202ENST00000474048 SCGNO76038 276 aa8.8□□□□□ -1
PRPF38A-202ENST00000474048 GOSR1O95249 250 aa8.8□□□□□ -1
PRPF38A-202ENST00000474048 IGHV3-13P01766 116 aa8.8□□□□□ -1
PRPF38A-202ENST00000474048 OR4A8P0C604 315 aa8.8□□□□□ -1
PRPF38A-202ENST00000474048 PRF1P14222 555 aa8.8□□□□□ -1
PRPF38A-202ENST00000474048 SNRPBP14678 240 aaKnown RBP8.8□□□□□ -1
PRPF38A-202ENST00000474048 ZNF250P15622 560 aa8.8□□□□□ -1
PRPF38A-202ENST00000474048 ADRA2CP18825 462 aa8.8□□□□□ -1
PRPF38A-202ENST00000474048 HAAOP46952 286 aa8.8□□□□□ -1
PRPF38A-202ENST00000474048 SRP9P49458 86 aaKnown RBP8.8□□□□□ -1
PRPF38A-202ENST00000474048 ZNF81P51508 661 aa8.8□□□□□ -1
PRPF38A-202ENST00000474048 BMXP51813 675 aa8.8□□□□□ -1
PRPF38A-202ENST00000474048 ART1P52961 327 aa8.8□□□□□ -1
PRPF38A-202ENST00000474048 CLDN12P56749 244 aa8.8□□□□□ -1
PRPF38A-202ENST00000474048 SNRPD2P62316 118 aaKnown RBP8.8□□□□□ -1
PRPF38A-202ENST00000474048 NKX6-1P78426 367 aaPredicted RBP8.8□□□□□ -1
PRPF38A-202ENST00000474048 ZNF846Q147U1 533 aa8.8□□□□□ -1
PRPF38A-202ENST00000474048 CDSNQ15517 529 aa8.8□□□□□ -1
PRPF38A-202ENST00000474048 ALKBH6Q3KRA9 238 aa8.8□□□□□ -1
PRPF38A-202ENST00000474048 TMEM42Q69YG0 159 aa8.8□□□□□ -1
PRPF38A-202ENST00000474048 FIP1L1Q6UN15 594 aaKnown RBP8.8□□□□□ -1
PRPF38A-202ENST00000474048 LRRC28Q86X40 367 aaPredicted RBP8.8□□□□□ -1
PRPF38A-202ENST00000474048 ANGPTL5Q86XS5 388 aa8.8□□□□□ -1
PRPF38A-202ENST00000474048 MKXQ8IYA7 352 aa8.8□□□□□ -1
PRPF38A-202ENST00000474048 OR2Z1Q8NG97 314 aa8.8□□□□□ -1
PRPF38A-202ENST00000474048 OR5D18Q8NGL1 313 aa8.8□□□□□ -1
PRPF38A-202ENST00000474048 UBASH3BQ8TF42 649 aa8.8□□□□□ -1
PRPF38A-202ENST00000474048 FAM3DQ96BQ1 224 aa8.8□□□□□ -1
PRPF38A-202ENST00000474048 S100A16Q96FQ6 103 aaKnown RBP8.8□□□□□ -1
PRPF38A-202ENST00000474048 DIRC2Q96SL1 478 aa8.8□□□□□ -1
PRPF38A-202ENST00000474048 URM1Q9BTM9 101 aaKnown RBP8.8□□□□□ -1
PRPF38A-202ENST00000474048 BARHL1Q9BZE3 327 aa8.8□□□□□ -1
PRPF38A-202ENST00000474048 CXXC4Q9H2H0 198 aa8.8□□□□□ -1
PRPF38A-202ENST00000474048 NPDC1Q9NQX5 325 aaPredicted RBP8.8□□□□□ -1
PRPF38A-202ENST00000474048 ZDHHC8Q9ULC8 765 aa8.8□□□□□ -1
PRPF38A-202ENST00000474048 SPATA2Q9UM82 520 aa8.8□□□□□ -1
PRPF38A-202ENST00000474048 NBEAQ8NFP9 2946 aa8.8□□□□□ -1
PRPF38A-202ENST00000474048 BSNQ9UPA5 3926 aa8.79□□□□□ -1
PRPF38A-202ENST00000474048 A0A0G2JK05 382 aa8.79□□□□□ -1
PRPF38A-202ENST00000474048 hCG_1807616A0A1W2PRN6 198 aa8.79□□□□□ -1
PRPF38A-202ENST00000474048 LRP5LA4QPB2 252 aa8.79□□□□□ -1
PRPF38A-202ENST00000474048 PYCARD-AS1I3L0S3 204 aa8.79□□□□□ -1
PRPF38A-202ENST00000474048 HPGDSO60760 199 aa8.79□□□□□ -1
PRPF38A-202ENST00000474048 CRTAPO75718 401 aaPredicted RBP8.79□□□□□ -1
PRPF38A-202ENST00000474048 APOBEC3AP31941 199 aaPredicted RBP8.79□□□□□ -1
PRPF38A-202ENST00000474048 SERPINF1P36955 418 aa8.79□□□□□ -1
PRPF38A-202ENST00000474048 PTGFRP43088 359 aa8.79□□□□□ -1
PRPF38A-202ENST00000474048 OR3A4PP47883 348 aa8.79□□□□□ -1
PRPF38A-202ENST00000474048 INPP1P49441 399 aa8.79□□□□□ -1
PRPF38A-202ENST00000474048 DMRTC1Q5HYR2 192 aa8.79□□□□□ -1
PRPF38A-202ENST00000474048 C1orf100Q5SVJ3 147 aa8.79□□□□□ -1
PRPF38A-202ENST00000474048 ZNF529Q6P280 563 aa8.79□□□□□ -1
PRPF38A-202ENST00000474048 GLIPR1L1Q6UWM5 242 aa8.79□□□□□ -1
PRPF38A-202ENST00000474048 FAM131AQ6UXB0 335 aa8.79□□□□□ -1
PRPF38A-202ENST00000474048 BAIAP2L2Q6UXY1 529 aa8.79□□□□□ -1
PRPF38A-202ENST00000474048 C22orf34Q6ZV56 151 aa8.79□□□□□ -1
PRPF38A-202ENST00000474048 ZNF611Q8N823 705 aa8.79□□□□□ -1
PRPF38A-202ENST00000474048 OR10AD1Q8NGE0 317 aa8.79□□□□□ -1
PRPF38A-202ENST00000474048 OR51D1Q8NGF3 324 aa8.79□□□□□ -1
PRPF38A-202ENST00000474048 KCNG3Q8TAE7 436 aa8.79□□□□□ -1
PRPF38A-202ENST00000474048 TMEM171Q8WVE6 324 aa8.79□□□□□ -1
PRPF38A-202ENST00000474048 RAB40AQ8WXH6 277 aa8.79□□□□□ -1
PRPF38A-202ENST00000474048 OR5P3Q8WZ94 311 aa8.79□□□□□ -1
PRPF38A-202ENST00000474048 DVL3Q92997 716 aaPredicted RBP8.79□□□□□ -1
PRPF38A-202ENST00000474048 FBXW5Q969U6 566 aa8.79□□□□□ -1
PRPF38A-202ENST00000474048 ELMOD3Q96FG2 381 aa8.79□□□□□ -1
PRPF38A-202ENST00000474048 CMTM3Q96MX0 182 aa8.79□□□□□ -1
PRPF38A-202ENST00000474048 DHRS9Q9BPW9 319 aa8.79□□□□□ -1
PRPF38A-202ENST00000474048 SLC30A2Q9BRI3 323 aa8.79□□□□□ -1
PRPF38A-202ENST00000474048 MRPL37Q9BZE1 423 aaKnown RBP8.79□□□□□ -1
PRPF38A-202ENST00000474048 EGLN1Q9GZT9 426 aa8.79□□□□□ -1
PRPF38A-202ENST00000474048 NXF2Q9GZY0 626 aaKnown RBP8.79□□□□□ -1
PRPF38A-202ENST00000474048 ATG5Q9H1Y0 275 aa8.79□□□□□ -1
PRPF38A-202ENST00000474048 CNTD2Q9H8S5 307 aa8.79□□□□□ -1
PRPF38A-202ENST00000474048 DIABLOQ9NR28 239 aa8.79□□□□□ -1
PRPF38A-202ENST00000474048 CISD1Q9NZ45 108 aaKnown RBP8.79□□□□□ -1
PRPF38A-202ENST00000474048 RABL2AQ9UBK7 228 aaPredicted RBP8.79□□□□□ -1
PRPF38A-202ENST00000474048 RABL2BQ9UNT1 228 aa8.79□□□□□ -1
PRPF38A-202ENST00000474048 NBASA2RRP1 2371 aa8.79□□□□□ -1
PRPF38A-202ENST00000474048 EPG5Q9HCE0 2579 aa8.78□□□□□ -1
PRPF38A-202ENST00000474048 IGKV1-9A0A0C4DH69 117 aa8.78□□□□□ -1
PRPF38A-202ENST00000474048 PQLC2LA1A4F0 135 aa8.78□□□□□ -1
PRPF38A-202ENST00000474048 B9A039 149 aa8.78□□□□□ -1
PRPF38A-202ENST00000474048 CLDN25C9JDP6 229 aa8.78□□□□□ -1
PRPF38A-202ENST00000474048 SPRY3O43610 288 aa8.78□□□□□ -1
PRPF38A-202ENST00000474048 PAHP00439 452 aa8.78□□□□□ -1
PRPF38A-202ENST00000474048 APOA1P02647 267 aa8.78□□□□□ -1
PRPF38A-202ENST00000474048 GRPP07492 148 aa8.78□□□□□ -1
PRPF38A-202ENST00000474048 IRF2P14316 349 aa8.78□□□□□ -1
PRPF38A-202ENST00000474048 COX6B1P14854 86 aa8.78□□□□□ -1
PRPF38A-202ENST00000474048 SERPINA2P20848 420 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms