RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 C19orf12Q9NSK7 152 aa5.41□□□□□ -1.54
HERC4-209ENST00000473533 PADI1Q9ULC6 663 aa5.41□□□□□ -1.54
HERC4-209ENST00000473533 HSF4Q9ULV5 492 aa5.41□□□□□ -1.54
HERC4-209ENST00000473533 FAM96BQ9Y3D0 163 aa5.41□□□□□ -1.54
HERC4-209ENST00000473533 TMED3Q9Y3Q3 217 aa5.41□□□□□ -1.54
HERC4-209ENST00000473533 BRWD1Q9NSI6 2320 aa5.41□□□□□ -1.54
HERC4-209ENST00000473533 CPAMD8Q8IZJ3 1885 aa5.41□□□□□ -1.54
HERC4-209ENST00000473533 MPDZO75970 2070 aa5.4□□□□□ -1.54
HERC4-209ENST00000473533 LOC102725191A0A1B0GVB3 256 aa5.4□□□□□ -1.54
HERC4-209ENST00000473533 A0A1W2PPC4 97 aa5.4□□□□□ -1.54
HERC4-209ENST00000473533 WIPF3A6NGB9 483 aa5.4□□□□□ -1.54
HERC4-209ENST00000473533 MSGN1A6NI15 193 aa5.4□□□□□ -1.54
HERC4-209ENST00000473533 C10orf142B7Z368 130 aa5.4□□□□□ -1.54
HERC4-209ENST00000473533 SOCS1O15524 211 aa5.4□□□□□ -1.54
HERC4-209ENST00000473533 HBE1P02100 147 aa5.4□□□□□ -1.54
HERC4-209ENST00000473533 GABRG2P18507 467 aa5.4□□□□□ -1.54
HERC4-209ENST00000473533 DHPSP49366 369 aaPredicted RBP5.4□□□□□ -1.54
HERC4-209ENST00000473533 ZNF121P58317 390 aaPredicted RBP5.4□□□□□ -1.54
HERC4-209ENST00000473533 SUPT4H1P63272 117 aaKnown RBP5.4□□□□□ -1.54
HERC4-209ENST00000473533 ZNF616Q08AN1 781 aa5.4□□□□□ -1.54
HERC4-209ENST00000473533 ZNF239Q16600 458 aaKnown RBP5.4□□□□□ -1.54
HERC4-209ENST00000473533 AWAT1Q58HT5 328 aa5.4□□□□□ -1.54
HERC4-209ENST00000473533 DPPA3Q6W0C5 159 aa5.4□□□□□ -1.54
HERC4-209ENST00000473533 LRRC18Q8N456 261 aa5.4□□□□□ -1.54
HERC4-209ENST00000473533 GJC3Q8NFK1 279 aa5.4□□□□□ -1.54
HERC4-209ENST00000473533 OR8B12Q8NGG6 310 aa5.4□□□□□ -1.54
HERC4-209ENST00000473533 TSLPQ969D9 159 aa5.4□□□□□ -1.54
HERC4-209ENST00000473533 INTS12Q96CB8 462 aaKnown RBP5.4□□□□□ -1.54
HERC4-209ENST00000473533 ADAT1Q9BUB4 502 aaKnown RBP5.4□□□□□ -1.54
HERC4-209ENST00000473533 METTL9Q9H1A3 318 aa5.4□□□□□ -1.54
HERC4-209ENST00000473533 PCED1AQ9H1Q7 454 aa5.4□□□□□ -1.54
HERC4-209ENST00000473533 TCEAL2Q9H3H9 227 aaPredicted RBP5.4□□□□□ -1.54
HERC4-209ENST00000473533 SIRT7Q9NRC8 400 aa5.4□□□□□ -1.54
HERC4-209ENST00000473533 DECR2Q9NUI1 292 aa5.4□□□□□ -1.54
HERC4-209ENST00000473533 ZNF391Q9UJN7 358 aa5.4□□□□□ -1.54
HERC4-209ENST00000473533 HDGFL3Q9Y3E1 203 aa5.4□□□□□ -1.54
HERC4-209ENST00000473533 CXorf65A6NEN9 183 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 ST8SIA3O43173 380 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 IGHV4-34P06331 123 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 CYC1P08574 325 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 SNRNP70P08621 437 aaKnown RBP5.4□□□□□ -1.55
HERC4-209ENST00000473533 NME1P15531 152 aaKnown RBP5.4□□□□□ -1.55
HERC4-209ENST00000473533 ZNF44P15621 663 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 OR3A4PP47883 348 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 VEGFBP49765 207 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 FMODQ06828 376 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 SQSTM1Q13501 440 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 C1orf61Q13536 156 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 OR8B8Q15620 311 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 SLC22A6Q4U2R8 563 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 PLAC9Q5JTB6 97 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 KRBOX4Q5JUW0 171 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 AADACL3Q5VUY0 350 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 SLC25A47Q6Q0C1 308 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 ZNF321PQ8N8H1 164 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 ZNF565Q8N9K5 539 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 SUMF2Q8NBJ7 301 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 SPTSSAQ969W0 71 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 FAM71F1Q96KD3 344 aaPredicted RBP5.4□□□□□ -1.55
HERC4-209ENST00000473533 NICN1Q9BSH3 213 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 TMEM106CQ9BVX2 250 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 MRPL13Q9BYD1 178 aaKnown RBP5.4□□□□□ -1.55
HERC4-209ENST00000473533 IGFLR1Q9H665 355 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 SPACA1Q9HBV2 294 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 ZNF701Q9NV72 531 aaPredicted RBP5.4□□□□□ -1.55
HERC4-209ENST00000473533 PLEKHJ1Q9NW61 149 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 NOSIPQ9Y314 301 aaKnown RBP5.4□□□□□ -1.55
HERC4-209ENST00000473533 PTRH2Q9Y3E5 179 aaKnown RBP5.4□□□□□ -1.55
HERC4-209ENST00000473533 LSM5Q9Y4Y9 91 aaKnown RBP5.4□□□□□ -1.55
HERC4-209ENST00000473533 PIAS3Q9Y6X2 628 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 A0A087WWC5 75 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 IGLV3-32A0A0A0MS00 114 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 DUXBA0A1W2PPF3 345 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 FAM230AA0A1W2PPH8 454 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 DUX1O43812 170 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 DHRS3O75911 302 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 HTR3BO95264 441 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 KNG1P01042 644 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 GLAP06280 429 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 CA3P07451 260 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 ZNF728P0DKX0 622 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 MMP9P14780 707 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 ZNF43P17038 809 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 NFYBP25208 207 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 RGS19P49795 217 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 UCP3P55916 312 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 TMEM50BP56557 158 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 RNF4P78317 190 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 SRSF3P84103 164 aaKnown RBP5.4□□□□□ -1.55
HERC4-209ENST00000473533 FABP9Q0Z7S8 132 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 KISS1Q15726 138 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 MIDNQ504T8 468 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 SOHLH1Q5JUK2 328 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 GGNBP1Q5YKI7 109 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 ZFP82Q8N141 532 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 SEMA6DQ8NFY4 1073 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 SLC22A8Q8TCC7 542 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 HAS2Q92819 552 aa5.4□□□□□ -1.55
HERC4-209ENST00000473533 GNPNAT1Q96EK6 184 aaPredicted RBP5.4□□□□□ -1.55
HERC4-209ENST00000473533 C1orf147Q96MC9 270 aaPredicted RBP5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms