RNA–Protein interactions for RNA: ENST00000473191.1

USP40-212, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-212ENST00000473191 SRSF10O75494 262 aaKnown RBP13.71□□□□□ -0.21
USP40-212ENST00000473191 IGHV4-59P01825 116 aa13.71□□□□□ -0.21
USP40-212ENST00000473191 IL13RA1P78552 427 aa13.71□□□□□ -0.21
USP40-212ENST00000473191 EFNB1P98172 346 aa13.71□□□□□ -0.21
USP40-212ENST00000473191 KIR3DL3Q8N743 410 aa13.71□□□□□ -0.21
USP40-212ENST00000473191 OR5K1Q8NHB7 308 aa13.71□□□□□ -0.21
USP40-212ENST00000473191 ANGPTL6Q8NI99 470 aa13.71□□□□□ -0.21
USP40-212ENST00000473191 OR51E1Q8TCB6 317 aa13.71□□□□□ -0.21
USP40-212ENST00000473191 OR8B4Q96RC9 309 aa13.71□□□□□ -0.21
USP40-212ENST00000473191 DCTN5Q9BTE1 182 aa13.71□□□□□ -0.21
USP40-212ENST00000473191 YIPF3Q9GZM5 350 aa13.71□□□□□ -0.21
USP40-212ENST00000473191 OR51I2Q9H344 312 aa13.71□□□□□ -0.21
USP40-212ENST00000473191 GPR84Q9NQS5 396 aa13.71□□□□□ -0.21
USP40-212ENST00000473191 KIF17Q9P2E2 1029 aa13.71□□□□□ -0.21
USP40-212ENST00000473191 A6NIN4 97 aa13.7□□□□□ -0.22
USP40-212ENST00000473191 ZNF732B4DXR9 585 aa13.7□□□□□ -0.22
USP40-212ENST00000473191 RNASEK-C17orf49H0YIS7 233 aa13.7□□□□□ -0.22
USP40-212ENST00000473191 ECDO95905 644 aaPredicted RBP13.7□□□□□ -0.22
USP40-212ENST00000473191 FAHP16930 419 aa13.7□□□□□ -0.22
USP40-212ENST00000473191 POLR2IP36954 125 aaKnown RBP13.7□□□□□ -0.22
USP40-212ENST00000473191 KRTAP10-3P60369 221 aa13.7□□□□□ -0.22
USP40-212ENST00000473191 BNIP1Q12981 228 aa13.7□□□□□ -0.22
USP40-212ENST00000473191 PDCD1Q15116 288 aa13.7□□□□□ -0.22
USP40-212ENST00000473191 PRR31Q5SQ13 230 aa13.7□□□□□ -0.22
USP40-212ENST00000473191 ATPAF1Q5TC12 328 aaPredicted RBP13.7□□□□□ -0.22
USP40-212ENST00000473191 ZNF788Q6ZQV5 615 aa13.7□□□□□ -0.22
USP40-212ENST00000473191 SSX6Q7RTT6 188 aa13.7□□□□□ -0.22
USP40-212ENST00000473191 SLC36A1Q7Z2H8 476 aa13.7□□□□□ -0.22
USP40-212ENST00000473191 AMIGO2Q86SJ2 522 aa13.7□□□□□ -0.22
USP40-212ENST00000473191 BATF2Q8N1L9 274 aa13.7□□□□□ -0.22
USP40-212ENST00000473191 TCEANCQ8N8B7 351 aa13.7□□□□□ -0.22
USP40-212ENST00000473191 OR10Z1Q8NGY1 313 aa13.7□□□□□ -0.22
USP40-212ENST00000473191 H1FXQ92522 213 aaKnown RBP13.7□□□□□ -0.22
USP40-212ENST00000473191 C12orf43Q96C57 262 aaKnown RBP13.7□□□□□ -0.22
USP40-212ENST00000473191 NRBF2Q96F24 287 aa13.7□□□□□ -0.22
USP40-212ENST00000473191 ZNF488Q96MN9 340 aa13.7□□□□□ -0.22
USP40-212ENST00000473191 APOL4Q9BPW4 351 aa13.7□□□□□ -0.22
USP40-212ENST00000473191 YY1AP1Q9H869 796 aa13.7□□□□□ -0.22
USP40-212ENST00000473191 NOX4Q9NPH5 578 aa13.7□□□□□ -0.22
USP40-212ENST00000473191 IGKV1D-17A0A075B6S4 117 aa13.69□□□□□ -0.22
USP40-212ENST00000473191 ZNF816-ZNF321PA0A0X1KG74 233 aa13.69□□□□□ -0.22
USP40-212ENST00000473191 TMEM210A6NLX4 147 aa13.69□□□□□ -0.22
USP40-212ENST00000473191 KCNAB3O43448 404 aa13.69□□□□□ -0.22
USP40-212ENST00000473191 NDUFB3O43676 98 aa13.69□□□□□ -0.22
USP40-212ENST00000473191 TTRP02766 147 aa13.69□□□□□ -0.22
USP40-212ENST00000473191 BPIFB3P59826 476 aa13.69□□□□□ -0.22
USP40-212ENST00000473191 CXCR4P61073 352 aa13.69□□□□□ -0.22
USP40-212ENST00000473191 ROM1Q03395 351 aa13.69□□□□□ -0.22
USP40-212ENST00000473191 AADACL4Q5VUY2 407 aa13.69□□□□□ -0.22
USP40-212ENST00000473191 MOB3CQ70IA8 216 aa13.69□□□□□ -0.22
USP40-212ENST00000473191 KRT74Q7RTS7 529 aa13.69□□□□□ -0.22
USP40-212ENST00000473191 ZNF679Q8IYX0 411 aa13.69□□□□□ -0.22
USP40-212ENST00000473191 FTMTQ8N4E7 242 aa13.69□□□□□ -0.22
USP40-212ENST00000473191 ZNRF1Q8ND25 227 aa13.69□□□□□ -0.22
USP40-212ENST00000473191 FAM81AQ8TBF8 368 aa13.69□□□□□ -0.22
USP40-212ENST00000473191 TNFRSF14Q92956 283 aa13.69□□□□□ -0.22
USP40-212ENST00000473191 IL4I1Q96RQ9 567 aa13.69□□□□□ -0.22
USP40-212ENST00000473191 MROQ9BYG7 248 aa13.69□□□□□ -0.22
USP40-212ENST00000473191 ADGRL4Q9HBW9 690 aa13.69□□□□□ -0.22
USP40-212ENST00000473191 NLKQ9UBE8 527 aa13.69□□□□□ -0.22
USP40-212ENST00000473191 MAB21L2Q9Y586 359 aa13.69□□□□□ -0.22
USP40-212ENST00000473191 KPTNQ9Y664 436 aa13.69□□□□□ -0.22
USP40-212ENST00000473191 A0A0U1RQV5 110 aa13.68□□□□□ -0.22
USP40-212ENST00000473191 ZAR1LA6NP61 321 aa13.68□□□□□ -0.22
USP40-212ENST00000473191 H3BSH0 61 aa13.68□□□□□ -0.22
USP40-212ENST00000473191 PSG2P11465 335 aa13.68□□□□□ -0.22
USP40-212ENST00000473191 GLRA1P23415 457 aa13.68□□□□□ -0.22
USP40-212ENST00000473191 MAP2K3P46734 347 aa13.68□□□□□ -0.22
USP40-212ENST00000473191 RAG2P55895 527 aa13.68□□□□□ -0.22
USP40-212ENST00000473191 ATP6AP1Q15904 470 aa13.68□□□□□ -0.22
USP40-212ENST00000473191 CEACAM21Q3KPI0 293 aa13.68□□□□□ -0.22
USP40-212ENST00000473191 SLX4IPQ5VYV7 408 aa13.68□□□□□ -0.22
USP40-212ENST00000473191 C12orf73Q69YU5 71 aa13.68□□□□□ -0.22
USP40-212ENST00000473191 KCTD18Q6PI47 426 aaPredicted RBP13.68□□□□□ -0.22
USP40-212ENST00000473191 HAGHLQ6PII5 290 aaPredicted RBP13.68□□□□□ -0.22
USP40-212ENST00000473191 MEPCEQ7L2J0 689 aaKnown RBP13.68□□□□□ -0.22
USP40-212ENST00000473191 COMMD2Q86X83 199 aa13.68□□□□□ -0.22
USP40-212ENST00000473191 LRTOMTQ8WZ04 291 aa13.68□□□□□ -0.22
USP40-212ENST00000473191 CNN2Q99439 309 aaKnown RBP13.68□□□□□ -0.22
USP40-212ENST00000473191 ZNF696Q9H7X3 374 aa13.68□□□□□ -0.22
USP40-212ENST00000473191 KRT84Q9NSB2 600 aa13.68□□□□□ -0.22
USP40-212ENST00000473191 SLC25A10Q9UBX3 287 aaPredicted RBP13.68□□□□□ -0.22
USP40-212ENST00000473191 ZNF222Q9UK12 451 aa13.68□□□□□ -0.22
USP40-212ENST00000473191 IKZF2Q9UKS7 526 aa13.68□□□□□ -0.22
USP40-212ENST00000473191 PIGLQ9Y2B2 252 aa13.68□□□□□ -0.22
USP40-212ENST00000473191 A0A1B0GVI7 797 aa13.67□□□□□ -0.22
USP40-212ENST00000473191 OR2AT4A6NND4 320 aa13.67□□□□□ -0.22
USP40-212ENST00000473191 G3V2T6 193 aa13.67□□□□□ -0.22
USP40-212ENST00000473191 SIGLEC5O15389 551 aa13.67□□□□□ -0.22
USP40-212ENST00000473191 SYNGR1O43759 233 aa13.67□□□□□ -0.22
USP40-212ENST00000473191 APOL3O95236 402 aa13.67□□□□□ -0.22
USP40-212ENST00000473191 ACAA1P09110 424 aaPredicted RBP13.67□□□□□ -0.22
USP40-212ENST00000473191 HOXB6P17509 224 aaKnown RBP13.67□□□□□ -0.22
USP40-212ENST00000473191 IER3P46695 156 aa13.67□□□□□ -0.22
USP40-212ENST00000473191 GABRA2P47869 451 aa13.67□□□□□ -0.22
USP40-212ENST00000473191 CEBPDP49716 269 aaPredicted RBP13.67□□□□□ -0.22
USP40-212ENST00000473191 RIDAP52758 137 aaKnown RBP13.67□□□□□ -0.22
USP40-212ENST00000473191 ESRRGP62508 458 aa13.67□□□□□ -0.22
USP40-212ENST00000473191 GNG3P63215 75 aa13.67□□□□□ -0.22
USP40-212ENST00000473191 TAF9Q16594 264 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms