RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 CSMD1Q96PZ7 3565 aa16.85■□□□□ 0.29
SF1-213ENST00000472725 LRP5LA4QPB2 252 aa16.85■□□□□ 0.29
SF1-213ENST00000472725 TMEM178BH3BS89 294 aa16.85■□□□□ 0.29
SF1-213ENST00000472725 PPIHO43447 177 aaKnown RBP16.85■□□□□ 0.29
SF1-213ENST00000472725 TNFAIP8O95379 198 aa16.85■□□□□ 0.29
SF1-213ENST00000472725 GRPP07492 148 aa16.85■□□□□ 0.29
SF1-213ENST00000472725 FOSL1P15407 271 aa16.85■□□□□ 0.29
SF1-213ENST00000472725 CHN2P52757 468 aa16.85■□□□□ 0.29
SF1-213ENST00000472725 LOXL1Q08397 574 aaPredicted RBP16.85■□□□□ 0.29
SF1-213ENST00000472725 ZNF154Q13106 437 aa16.85■□□□□ 0.29
SF1-213ENST00000472725 CEP78Q5JTW2 689 aa16.85■□□□□ 0.29
SF1-213ENST00000472725 PRAMEF6Q5VXH4 476 aa16.85■□□□□ 0.29
SF1-213ENST00000472725 ZNF367Q7RTV3 350 aa16.85■□□□□ 0.29
SF1-213ENST00000472725 TSEN15Q8WW01 171 aaKnown RBP16.85■□□□□ 0.29
SF1-213ENST00000472725 SPSB1Q96BD6 273 aa16.85■□□□□ 0.29
SF1-213ENST00000472725 ADAT3Q96EY9 351 aaPredicted RBP16.85■□□□□ 0.29
SF1-213ENST00000472725 PPP1R3EQ9H7J1 279 aa16.85■□□□□ 0.29
SF1-213ENST00000472725 ACOT13Q9NPJ3 140 aa16.85■□□□□ 0.29
SF1-213ENST00000472725 RNF7Q9UBF6 113 aa16.85■□□□□ 0.29
SF1-213ENST00000472725 NPTNQ9Y639 398 aa16.85■□□□□ 0.29
SF1-213ENST00000472725 CACNG2Q9Y698 323 aa16.85■□□□□ 0.29
SF1-213ENST00000472725 TRBV5-5A0A0J9YX44 114 aa16.84■□□□□ 0.29
SF1-213ENST00000472725 A6NLC8 198 aa16.84■□□□□ 0.29
SF1-213ENST00000472725 ZNF732B4DXR9 585 aa16.84■□□□□ 0.29
SF1-213ENST00000472725 OCM2P0CE71 109 aa16.84■□□□□ 0.29
SF1-213ENST00000472725 USF1P22415 310 aaPredicted RBP16.84■□□□□ 0.29
SF1-213ENST00000472725 PRKACBP22694 351 aa16.84■□□□□ 0.29
SF1-213ENST00000472725 CPT2P23786 658 aa16.84■□□□□ 0.29
SF1-213ENST00000472725 THBS2P35442 1172 aa16.84■□□□□ 0.29
SF1-213ENST00000472725 GPM6AP51674 278 aa16.84■□□□□ 0.29
SF1-213ENST00000472725 FUT6P51993 359 aa16.84■□□□□ 0.29
SF1-213ENST00000472725 EMX1Q04741 257 aaPredicted RBP16.84■□□□□ 0.29
SF1-213ENST00000472725 TPBGQ13641 420 aa16.84■□□□□ 0.29
SF1-213ENST00000472725 MPPED2Q15777 294 aa16.84■□□□□ 0.29
SF1-213ENST00000472725 Q499Y3 187 aa16.84■□□□□ 0.29
SF1-213ENST00000472725 ZNF773Q6PK81 442 aa16.84■□□□□ 0.29
SF1-213ENST00000472725 KCTD8Q6ZWB6 473 aa16.84■□□□□ 0.29
SF1-213ENST00000472725 WDR86Q86TI4 376 aa16.84■□□□□ 0.29
SF1-213ENST00000472725 ZNF573Q86YE8 665 aa16.84■□□□□ 0.29
SF1-213ENST00000472725 OR10Z1Q8NGY1 313 aa16.84■□□□□ 0.29
SF1-213ENST00000472725 RGP1Q92546 391 aaPredicted RBP16.84■□□□□ 0.29
SF1-213ENST00000472725 UFD1Q92890 307 aa16.84■□□□□ 0.29
SF1-213ENST00000472725 MGLLQ99685 303 aa16.84■□□□□ 0.29
SF1-213ENST00000472725 OR51I2Q9H344 312 aa16.84■□□□□ 0.29
SF1-213ENST00000472725 ZCCHC4Q9H5U6 513 aa16.84■□□□□ 0.29
SF1-213ENST00000472725 GPR173Q9NS66 373 aa16.84■□□□□ 0.29
SF1-213ENST00000472725 A0A096LNT2 108 aa16.83■□□□□ 0.28
SF1-213ENST00000472725 PQLC2LA1A4F0 135 aa16.83■□□□□ 0.28
SF1-213ENST00000472725 TRIM64BA6NI03 449 aa16.83■□□□□ 0.28
SF1-213ENST00000472725 H3BSH0 61 aa16.83■□□□□ 0.28
SF1-213ENST00000472725 LMX1BO60663 402 aa16.83■□□□□ 0.28
SF1-213ENST00000472725 ATF1P18846 271 aa16.83■□□□□ 0.28
SF1-213ENST00000472725 PMELP40967 661 aa16.83■□□□□ 0.28
SF1-213ENST00000472725 TRAM1Q15629 374 aa16.83■□□□□ 0.28
SF1-213ENST00000472725 UBE2V2Q15819 145 aa16.83■□□□□ 0.28
SF1-213ENST00000472725 C11orf53Q8IXP5 236 aa16.83■□□□□ 0.28
SF1-213ENST00000472725 SPARTQ8N0X7 666 aa16.83■□□□□ 0.28
SF1-213ENST00000472725 ZFP41Q8N8Y5 198 aa16.83■□□□□ 0.28
SF1-213ENST00000472725 ZNF420Q8TAQ5 688 aaPredicted RBP16.83■□□□□ 0.28
SF1-213ENST00000472725 TMUB1Q9BVT8 246 aa16.83■□□□□ 0.28
SF1-213ENST00000472725 UFSP2Q9NUQ7 469 aa16.83■□□□□ 0.28
SF1-213ENST00000472725 C1orf123Q9NWV4 160 aa16.83■□□□□ 0.28
SF1-213ENST00000472725 WIPI2Q9Y4P8 454 aa16.83■□□□□ 0.28
SF1-213ENST00000472725 OTOGQ6ZRI0 2925 aa16.82■□□□□ 0.28
SF1-213ENST00000472725 A6NIN4 97 aa16.82■□□□□ 0.28
SF1-213ENST00000472725 RNF223E7ERA6 249 aa16.82■□□□□ 0.28
SF1-213ENST00000472725 CPEP16870 476 aa16.82■□□□□ 0.28
SF1-213ENST00000472725 PSMA1P25786 263 aaKnown RBP16.82■□□□□ 0.28
SF1-213ENST00000472725 MAPK3P27361 379 aaPredicted RBP16.82■□□□□ 0.28
SF1-213ENST00000472725 MAP2K4P45985 399 aa16.82■□□□□ 0.28
SF1-213ENST00000472725 RPS11P62280 158 aaKnown RBP eCLIP16.82■□□□□ 0.28
SF1-213ENST00000472725 TMEM155Q4W5P6 130 aa16.82■□□□□ 0.28
SF1-213ENST00000472725 UBE2UQ5VVX9 321 aa16.82■□□□□ 0.28
SF1-213ENST00000472725 MUC20Q8N307 709 aaPredicted RBP16.82■□□□□ 0.28
SF1-213ENST00000472725 SCCPDHQ8NBX0 429 aa16.82■□□□□ 0.28
SF1-213ENST00000472725 ZNF671Q8TAW3 534 aa16.82■□□□□ 0.28
SF1-213ENST00000472725 TMEM106AQ96A25 262 aa16.82■□□□□ 0.28
SF1-213ENST00000472725 BORCS8Q96FH0 119 aa16.82■□□□□ 0.28
SF1-213ENST00000472725 COX4I2Q96KJ9 171 aa16.82■□□□□ 0.28
SF1-213ENST00000472725 FGF23Q9GZV9 251 aaPredicted RBP16.82■□□□□ 0.28
SF1-213ENST00000472725 TREM2Q9NZC2 230 aa16.82■□□□□ 0.28
SF1-213ENST00000472725 H7C1Q1 480 aa16.81■□□□□ 0.28
SF1-213ENST00000472725 SULT1B1O43704 296 aa16.81■□□□□ 0.28
SF1-213ENST00000472725 GPX5O75715 221 aa16.81■□□□□ 0.28
SF1-213ENST00000472725 LHBP01229 141 aa16.81■□□□□ 0.28
SF1-213ENST00000472725 IGHV2-70P01814 119 aa16.81■□□□□ 0.28
SF1-213ENST00000472725 HEXAP06865 529 aa16.81■□□□□ 0.28
SF1-213ENST00000472725 ACAA1P09110 424 aaPredicted RBP16.81■□□□□ 0.28
SF1-213ENST00000472725 MDH2P40926 338 aaKnown RBP16.81■□□□□ 0.28
SF1-213ENST00000472725 RBP2P50120 134 aa16.81■□□□□ 0.28
SF1-213ENST00000472725 BTG1P62324 171 aa16.81■□□□□ 0.28
SF1-213ENST00000472725 DOC2BQ14184 412 aa16.81■□□□□ 0.28
SF1-213ENST00000472725 KCNJ8Q15842 424 aa16.81■□□□□ 0.28
SF1-213ENST00000472725 ZNF529Q6P280 563 aa16.81■□□□□ 0.28
SF1-213ENST00000472725 WDR82Q6UXN9 313 aa16.81■□□□□ 0.28
SF1-213ENST00000472725 LHFPL2Q6ZUX7 228 aa16.81■□□□□ 0.28
SF1-213ENST00000472725 LRRC28Q86X40 367 aaPredicted RBP16.81■□□□□ 0.28
SF1-213ENST00000472725 CPNE2Q96FN4 548 aaPredicted RBP16.81■□□□□ 0.28
SF1-213ENST00000472725 C18orf12Q96KH6 178 aa16.81■□□□□ 0.28
SF1-213ENST00000472725 PKIBQ9C010 78 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms