RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 MGAT3Q09327 533 aa1.99□□□□□ -2.09
XRN1-210ENST00000472697 PON3Q15166 354 aa1.99□□□□□ -2.09
XRN1-210ENST00000472697 MAPRE2Q15555 327 aa1.99□□□□□ -2.09
XRN1-210ENST00000472697 TRAM1Q15629 374 aa1.99□□□□□ -2.09
XRN1-210ENST00000472697 C14orf177Q52M58 125 aa1.99□□□□□ -2.09
XRN1-210ENST00000472697 SMUG1Q53HV7 270 aa1.99□□□□□ -2.09
XRN1-210ENST00000472697 TPTE2P1Q5T6R2 138 aa1.99□□□□□ -2.09
XRN1-210ENST00000472697 STPG2Q8N412 459 aa1.99□□□□□ -2.09
XRN1-210ENST00000472697 C17orf78Q8N4C9 275 aa1.99□□□□□ -2.09
XRN1-210ENST00000472697 ARIH2OSQ8N7S6 290 aa1.99□□□□□ -2.09
XRN1-210ENST00000472697 OR4F15Q8NGB8 312 aa1.99□□□□□ -2.09
XRN1-210ENST00000472697 RDH5Q92781 318 aa1.99□□□□□ -2.09
XRN1-210ENST00000472697 DNAJC19Q96DA6 116 aa1.99□□□□□ -2.09
XRN1-210ENST00000472697 YIPF6Q96EC8 236 aa1.99□□□□□ -2.09
XRN1-210ENST00000472697 RNF185Q96GF1 192 aa1.99□□□□□ -2.09
XRN1-210ENST00000472697 NSMCE3Q96MG7 304 aa1.99□□□□□ -2.09
XRN1-210ENST00000472697 TMEM56Q96MV1 263 aa1.99□□□□□ -2.09
XRN1-210ENST00000472697 ZNF251Q9BRH9 671 aa1.99□□□□□ -2.09
XRN1-210ENST00000472697 RSG1Q9BU20 258 aa1.99□□□□□ -2.09
XRN1-210ENST00000472697 SHCBP1LQ9BZQ2 653 aa1.99□□□□□ -2.09
XRN1-210ENST00000472697 DEFB127Q9H1M4 99 aa1.99□□□□□ -2.09
XRN1-210ENST00000472697 SIAEQ9HAT2 523 aa1.99□□□□□ -2.09
XRN1-210ENST00000472697 MRM3Q9HC36 420 aaKnown RBP1.99□□□□□ -2.09
XRN1-210ENST00000472697 ABCB9Q9NP78 766 aa1.99□□□□□ -2.09
XRN1-210ENST00000472697 TREX1Q9NSU2 369 aa1.99□□□□□ -2.09
XRN1-210ENST00000472697 CTSZQ9UBR2 303 aa1.99□□□□□ -2.09
XRN1-210ENST00000472697 VAX2Q9UIW0 290 aa1.99□□□□□ -2.09
XRN1-210ENST00000472697 CACNA1HO95180 2353 aa1.99□□□□□ -2.09
XRN1-210ENST00000472697 MICAL3Q7RTP6 2002 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 TGIF2-C20orf24A0A0A6YYL0 155 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 GOLGA8JA6NMD2 632 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 FAM220BPB1ANY3 271 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 GOLGA8KD6RF30 607 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 C5orf67F2Z3F1 127 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 F5H768 121 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 GOLGA8MH3BSY2 632 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 FGF16O43320 207 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 EMC8O43402 210 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 CTNSO60931 367 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 RBBP9O75884 186 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 ZNF432O94892 652 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 FADS2O95864 444 aaKnown RBP1.98□□□□□ -2.09
XRN1-210ENST00000472697 IGHV3-48P01763 117 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 BCHEP06276 602 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 C2P06681 752 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 CD3GP09693 182 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 OR8U9P0C7N5 309 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 GOLGA8HP0CJ92 632 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 MLNP12872 115 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 FMO3P31513 532 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 BTDP43251 543 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 TUFMP49411 452 aaKnown RBP1.98□□□□□ -2.09
XRN1-210ENST00000472697 CAV2P51636 162 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 ZNF138P52744 262 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 HMGA2P52926 109 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 STX4Q12846 297 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 PGGHGQ32M88 737 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 CYP4Z2PQ8N1L4 340 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 GAPTQ8N292 157 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 ZNF740Q8NDX6 193 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 TTLQ8NG68 377 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 OR8U1Q8NH10 309 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 VN1R17PQ8TDU5 208 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 PHF10Q8WUB8 498 aaKnown RBP1.98□□□□□ -2.09
XRN1-210ENST00000472697 IL1F10Q8WWZ1 152 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 CLDN23Q96B33 292 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 PPP1R14BQ96C90 147 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 SEC22AQ96IW7 307 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 CDCA4Q9BXL8 241 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 UGT2B28Q9BY64 529 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 HDHD2Q9H0R4 259 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 PSTPIP2Q9H939 334 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 PROCRQ9UNN8 238 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 OR51B2Q9Y5P1 312 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 SLC25A15Q9Y619 301 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 LOXHD1Q8IVV2 1947 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 RAD50Q92878 1312 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 PRRC2BQ5JSZ5 2229 aaKnown RBP1.98□□□□□ -2.09
XRN1-210ENST00000472697 EPG5Q9HCE0 2579 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 FAM240AA0A1B0GVK7 77 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 ANKRD20A5PA0PJZ0 165 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 CCDC182A6NF36 153 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 CYSRT1A8MQ03 144 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 CDIPTO14735 213 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 ANGPTL7O43827 346 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 CA11O75493 328 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 AQP8O94778 261 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 GJB5O95377 273 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 CHTF8P0CG12 524 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 NEFHP12036 1026 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 FOLR2P14207 255 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 HOXA6P31267 233 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 CEACAM6P40199 344 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 MDH2P40926 338 aaKnown RBP1.98□□□□□ -2.09
XRN1-210ENST00000472697 KIR2DS2P43631 304 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 RPL14P50914 215 aaKnown RBP1.98□□□□□ -2.09
XRN1-210ENST00000472697 TAS2R31P59538 309 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 UNC119Q13432 240 aa1.98□□□□□ -2.09
XRN1-210ENST00000472697 CAPRIN1Q14444 709 aaKnown RBP1.98□□□□□ -2.09
XRN1-210ENST00000472697 VAMP3Q15836 100 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms