RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 OR5AK2Q8NH90 309 aa11.93□□□□□ -0.5
BRCA1-211ENST00000472490 PP6455Q8WZ26 134 aa11.93□□□□□ -0.5
BRCA1-211ENST00000472490 GGHQ92820 318 aa11.93□□□□□ -0.5
BRCA1-211ENST00000472490 ANKRD60Q9BZ19 345 aa11.93□□□□□ -0.5
BRCA1-211ENST00000472490 ISG20L2Q9H9L3 353 aaKnown RBP11.93□□□□□ -0.5
BRCA1-211ENST00000472490 PATZ1Q9HBE1 687 aaKnown RBP11.93□□□□□ -0.5
BRCA1-211ENST00000472490 PSORS1C1Q9UIG5 152 aa11.93□□□□□ -0.5
BRCA1-211ENST00000472490 SLC7A11Q9UPY5 501 aa11.93□□□□□ -0.5
BRCA1-211ENST00000472490 TRAV20A0A0B4J274 112 aa11.92□□□□□ -0.5
BRCA1-211ENST00000472490 TRBV2A0A0J9YWF9 115 aa11.92□□□□□ -0.5
BRCA1-211ENST00000472490 ANKRD61A6NGH8 418 aa11.92□□□□□ -0.5
BRCA1-211ENST00000472490 OOEPA6NGQ2 149 aa11.92□□□□□ -0.5
BRCA1-211ENST00000472490 ZNF732B4DXR9 585 aa11.92□□□□□ -0.5
BRCA1-211ENST00000472490 LGALS8O00214 317 aa11.92□□□□□ -0.5
BRCA1-211ENST00000472490 CDIPTO14735 213 aa11.92□□□□□ -0.5
BRCA1-211ENST00000472490 ZNF20P17024 532 aa11.92□□□□□ -0.5
BRCA1-211ENST00000472490 HNF1AP20823 631 aa11.92□□□□□ -0.5
BRCA1-211ENST00000472490 THBS2P35442 1172 aa11.92□□□□□ -0.5
BRCA1-211ENST00000472490 VHLP40337 213 aa11.92□□□□□ -0.5
BRCA1-211ENST00000472490 KIR3DL2P43630 455 aa11.92□□□□□ -0.5
BRCA1-211ENST00000472490 ETV1P50549 477 aa11.92□□□□□ -0.5
BRCA1-211ENST00000472490 NANOS3P60323 173 aaKnown RBP11.92□□□□□ -0.5
BRCA1-211ENST00000472490 MICBQ29980 383 aa11.92□□□□□ -0.5
BRCA1-211ENST00000472490 ESCO2Q56NI9 601 aa11.92□□□□□ -0.5
BRCA1-211ENST00000472490 C6orf141Q5SZD1 244 aa11.92□□□□□ -0.5
BRCA1-211ENST00000472490 RPL22L1Q6P5R6 122 aaKnown RBP11.92□□□□□ -0.5
BRCA1-211ENST00000472490 WDR82Q6UXN9 313 aa11.92□□□□□ -0.5
BRCA1-211ENST00000472490 DCDC5Q6ZRR9 648 aa11.92□□□□□ -0.5
BRCA1-211ENST00000472490 WDR86Q86TI4 376 aa11.92□□□□□ -0.5
BRCA1-211ENST00000472490 ZNF573Q86YE8 665 aa11.92□□□□□ -0.5
BRCA1-211ENST00000472490 OR10Z1Q8NGY1 313 aa11.92□□□□□ -0.5
BRCA1-211ENST00000472490 OR52N1Q8NH53 320 aa11.92□□□□□ -0.5
BRCA1-211ENST00000472490 ZNF671Q8TAW3 534 aa11.92□□□□□ -0.5
BRCA1-211ENST00000472490 LRRC29Q8WV35 223 aa11.92□□□□□ -0.5
BRCA1-211ENST00000472490 HPSE2Q8WWQ2 592 aa11.92□□□□□ -0.5
BRCA1-211ENST00000472490 MYDGFQ969H8 173 aa11.92□□□□□ -0.5
BRCA1-211ENST00000472490 PPP1R3EQ9H7J1 279 aa11.92□□□□□ -0.5
BRCA1-211ENST00000472490 TMEM165Q9HC07 324 aa11.92□□□□□ -0.5
BRCA1-211ENST00000472490 NEK6Q9HC98 313 aa11.92□□□□□ -0.5
BRCA1-211ENST00000472490 BABAM2Q9NXR7 383 aa11.92□□□□□ -0.5
BRCA1-211ENST00000472490 LPAR3Q9UBY5 353 aa11.92□□□□□ -0.5
BRCA1-211ENST00000472490 CDC42EP3Q9UKI2 254 aa11.92□□□□□ -0.5
BRCA1-211ENST00000472490 RRP15Q9Y3B9 282 aaKnown RBP11.92□□□□□ -0.5
BRCA1-211ENST00000472490 OR4C45A6NMZ5 311 aa11.91□□□□□ -0.5
BRCA1-211ENST00000472490 CEACAM18A8MTB9 384 aa11.91□□□□□ -0.5
BRCA1-211ENST00000472490 FAM157AC9JC47 383 aa11.91□□□□□ -0.5
BRCA1-211ENST00000472490 INAFM1C9JVW0 142 aa11.91□□□□□ -0.5
BRCA1-211ENST00000472490 XPNPEP2O43895 674 aa11.91□□□□□ -0.5
BRCA1-211ENST00000472490 ZNF205O95201 554 aa11.91□□□□□ -0.5
BRCA1-211ENST00000472490 LHBP01229 141 aa11.91□□□□□ -0.5
BRCA1-211ENST00000472490 OCM2P0CE71 109 aa11.91□□□□□ -0.5
BRCA1-211ENST00000472490 OCMP0CE72 109 aaPredicted RBP11.91□□□□□ -0.5
BRCA1-211ENST00000472490 RPS2P15880 293 aaKnown RBP11.91□□□□□ -0.5
BRCA1-211ENST00000472490 MUC1P15941 1255 aaPredicted RBP11.91□□□□□ -0.5
BRCA1-211ENST00000472490 MYF6P23409 242 aa11.91□□□□□ -0.5
BRCA1-211ENST00000472490 GATA3P23771 443 aa11.91□□□□□ -0.5
BRCA1-211ENST00000472490 RIPPLY3P57055 190 aa11.91□□□□□ -0.5
BRCA1-211ENST00000472490 TAS2R43P59537 309 aa11.91□□□□□ -0.5
BRCA1-211ENST00000472490 CNN3Q15417 329 aaKnown RBP11.91□□□□□ -0.5
BRCA1-211ENST00000472490 ZNF826PQ6ZT77 177 aa11.91□□□□□ -0.5
BRCA1-211ENST00000472490 AHSA2Q719I0 299 aa11.91□□□□□ -0.5
BRCA1-211ENST00000472490 C11orf53Q8IXP5 236 aa11.91□□□□□ -0.5
BRCA1-211ENST00000472490 RDH10Q8IZV5 341 aa11.91□□□□□ -0.5
BRCA1-211ENST00000472490 GCSAMQ8N6F7 178 aa11.91□□□□□ -0.5
BRCA1-211ENST00000472490 BOLLQ8N9W6 283 aaKnown RBP11.91□□□□□ -0.5
BRCA1-211ENST00000472490 SCCPDHQ8NBX0 429 aa11.91□□□□□ -0.5
BRCA1-211ENST00000472490 OR8B3Q8NGG8 313 aa11.91□□□□□ -0.5
BRCA1-211ENST00000472490 OR13C3Q8NGS6 347 aa11.91□□□□□ -0.5
BRCA1-211ENST00000472490 RPL3LQ92901 407 aaKnown RBP11.91□□□□□ -0.5
BRCA1-211ENST00000472490 TMEM186Q96B77 213 aa11.91□□□□□ -0.5
BRCA1-211ENST00000472490 C12orf43Q96C57 262 aaKnown RBP11.91□□□□□ -0.5
BRCA1-211ENST00000472490 NEIL1Q96FI4 390 aaPredicted RBP11.91□□□□□ -0.5
BRCA1-211ENST00000472490 OR8B2Q96RD0 313 aa11.91□□□□□ -0.5
BRCA1-211ENST00000472490 TMEM246Q9BRR3 403 aa11.91□□□□□ -0.5
BRCA1-211ENST00000472490 CHST5Q9GZS9 411 aa11.91□□□□□ -0.5
BRCA1-211ENST00000472490 OR51I2Q9H344 312 aa11.91□□□□□ -0.5
BRCA1-211ENST00000472490 Q9H521 79 aa11.91□□□□□ -0.5
BRCA1-211ENST00000472490 LPAR2Q9HBW0 351 aa11.91□□□□□ -0.5
BRCA1-211ENST00000472490 HIF1ANQ9NWT6 349 aa11.91□□□□□ -0.5
BRCA1-211ENST00000472490 RAB26Q9ULW5 256 aa11.91□□□□□ -0.5
BRCA1-211ENST00000472490 ERGIC3Q9Y282 383 aa11.91□□□□□ -0.5
BRCA1-211ENST00000472490 LRCH1Q9Y2L9 728 aa11.91□□□□□ -0.5
BRCA1-211ENST00000472490 POLDIP2Q9Y2S7 368 aa11.91□□□□□ -0.5
BRCA1-211ENST00000472490 TPRKBQ9Y3C4 175 aa11.91□□□□□ -0.5
BRCA1-211ENST00000472490 C3orf80F5H4A9 247 aa11.9□□□□□ -0.5
BRCA1-211ENST00000472490 MYL12BO14950 172 aa11.9□□□□□ -0.5
BRCA1-211ENST00000472490 ZFPL1O95159 310 aa11.9□□□□□ -0.5
BRCA1-211ENST00000472490 WNT2P09544 360 aa11.9□□□□□ -0.5
BRCA1-211ENST00000472490 FAM201AQ5SY85 155 aa11.9□□□□□ -0.5
BRCA1-211ENST00000472490 OR2G6Q5TZ20 316 aa11.9□□□□□ -0.5
BRCA1-211ENST00000472490 SFRP4Q6FHJ7 346 aaPredicted RBP11.9□□□□□ -0.5
BRCA1-211ENST00000472490 LAIR2Q6ISS4 152 aa11.9□□□□□ -0.5
BRCA1-211ENST00000472490 TEX29Q8N6K0 151 aa11.9□□□□□ -0.5
BRCA1-211ENST00000472490 DEFB108BQ8NET1 73 aa11.9□□□□□ -0.5
BRCA1-211ENST00000472490 SHARPINQ9H0F6 387 aa11.9□□□□□ -0.5
BRCA1-211ENST00000472490 GPR173Q9NS66 373 aa11.9□□□□□ -0.5
BRCA1-211ENST00000472490 ERVK-18Q9QC07 812 aa11.9□□□□□ -0.5
BRCA1-211ENST00000472490 FLNAP21333 2647 aaKnown RBP11.89□□□□□ -0.51
BRCA1-211ENST00000472490 PPIAL4CA0A0B4J2A2 164 aa11.89□□□□□ -0.51
BRCA1-211ENST00000472490 A0A0G2JMP0 313 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms