RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 IGLV3-1P01715 115 aa7.44□□□□□ -1.22
USF1-204ENST00000472217 IGHV1-69P01742 117 aa7.44□□□□□ -1.22
USF1-204ENST00000472217 TFF1P04155 84 aa7.44□□□□□ -1.22
USF1-204ENST00000472217 SELLP14151 372 aa7.44□□□□□ -1.22
USF1-204ENST00000472217 FAHP16930 419 aa7.44□□□□□ -1.22
USF1-204ENST00000472217 FASP25445 335 aa7.44□□□□□ -1.22
USF1-204ENST00000472217 TGM4P49221 684 aa7.44□□□□□ -1.22
USF1-204ENST00000472217 RASSF2P50749 326 aa7.44□□□□□ -1.22
USF1-204ENST00000472217 RIDAP52758 137 aaKnown RBP7.44□□□□□ -1.22
USF1-204ENST00000472217 CXCR4P61073 352 aa7.44□□□□□ -1.22
USF1-204ENST00000472217 IL13RA1P78552 427 aa7.44□□□□□ -1.22
USF1-204ENST00000472217 EFNB1P98172 346 aa7.44□□□□□ -1.22
USF1-204ENST00000472217 IKZF1Q13422 519 aa7.44□□□□□ -1.22
USF1-204ENST00000472217 ZNF829Q3KNS6 432 aaPredicted RBP7.44□□□□□ -1.22
USF1-204ENST00000472217 CEACAM21Q3KPI0 293 aa7.44□□□□□ -1.22
USF1-204ENST00000472217 CDONQ4KMG0 1287 aa7.44□□□□□ -1.22
USF1-204ENST00000472217 CEP78Q5JTW2 689 aa7.44□□□□□ -1.22
USF1-204ENST00000472217 ATPAF1Q5TC12 328 aaPredicted RBP7.44□□□□□ -1.22
USF1-204ENST00000472217 AADACL4Q5VUY2 407 aa7.44□□□□□ -1.22
USF1-204ENST00000472217 C1orf146Q5VVC0 180 aa7.44□□□□□ -1.22
USF1-204ENST00000472217 C16orf87Q6PH81 154 aa7.44□□□□□ -1.22
USF1-204ENST00000472217 ZNF322Q6U7Q0 402 aaPredicted RBP7.44□□□□□ -1.22
USF1-204ENST00000472217 Q6YL49 198 aa7.44□□□□□ -1.22
USF1-204ENST00000472217 ZNF788Q6ZQV5 615 aa7.44□□□□□ -1.22
USF1-204ENST00000472217 KRT74Q7RTS7 529 aa7.44□□□□□ -1.22
USF1-204ENST00000472217 VMO1Q7Z5L0 202 aa7.44□□□□□ -1.22
USF1-204ENST00000472217 AMIGO2Q86SJ2 522 aa7.44□□□□□ -1.22
USF1-204ENST00000472217 ZDHHC13Q8IUH4 622 aa7.44□□□□□ -1.22
USF1-204ENST00000472217 SLC35F2Q8IXU6 374 aa7.44□□□□□ -1.22
USF1-204ENST00000472217 TCEANCQ8N8B7 351 aa7.44□□□□□ -1.22
USF1-204ENST00000472217 LY6G5BQ8NDX9 201 aa7.44□□□□□ -1.22
USF1-204ENST00000472217 SGMS2Q8NHU3 365 aa7.44□□□□□ -1.22
USF1-204ENST00000472217 TMEM163Q8TC26 289 aa7.44□□□□□ -1.22
USF1-204ENST00000472217 GATAD2BQ8WXI9 593 aa7.44□□□□□ -1.22
USF1-204ENST00000472217 LRTOMTQ8WZ04 291 aa7.44□□□□□ -1.22
USF1-204ENST00000472217 PPP1R14AQ96A00 147 aa7.44□□□□□ -1.22
USF1-204ENST00000472217 DUS3LQ96G46 650 aaKnown RBP7.44□□□□□ -1.22
USF1-204ENST00000472217 FAM71F1Q96KD3 344 aaPredicted RBP7.44□□□□□ -1.22
USF1-204ENST00000472217 HIST1H2AAQ96QV6 131 aa7.44□□□□□ -1.22
USF1-204ENST00000472217 APOL4Q9BPW4 351 aa7.44□□□□□ -1.22
USF1-204ENST00000472217 GABARAPL1Q9H0R8 117 aa7.44□□□□□ -1.22
USF1-204ENST00000472217 DNTTIP1Q9H147 329 aa7.44□□□□□ -1.22
USF1-204ENST00000472217 CNTD2Q9H8S5 307 aa7.44□□□□□ -1.22
USF1-204ENST00000472217 ADGRL4Q9HBW9 690 aa7.44□□□□□ -1.22
USF1-204ENST00000472217 NOX4Q9NPH5 578 aa7.44□□□□□ -1.22
USF1-204ENST00000472217 GPR84Q9NQS5 396 aa7.44□□□□□ -1.22
USF1-204ENST00000472217 TNFRSF19Q9NS68 423 aa7.44□□□□□ -1.22
USF1-204ENST00000472217 ACOXLQ9NUZ1 547 aa7.44□□□□□ -1.22
USF1-204ENST00000472217 ONECUT1Q9UBC0 465 aa7.44□□□□□ -1.22
USF1-204ENST00000472217 NUFIP1Q9UHK0 495 aaKnown RBP7.44□□□□□ -1.22
USF1-204ENST00000472217 IKZF2Q9UKS7 526 aa7.44□□□□□ -1.22
USF1-204ENST00000472217 GTF2A1LQ9UNN4 478 aa7.44□□□□□ -1.22
USF1-204ENST00000472217 KPTNQ9Y664 436 aa7.44□□□□□ -1.22
USF1-204ENST00000472217 NBEAL1Q6ZS30 2694 aa7.43□□□□□ -1.22
USF1-204ENST00000472217 A0A0U1RQK1 487 aa7.43□□□□□ -1.22
USF1-204ENST00000472217 A0A1B0GVI7 797 aa7.43□□□□□ -1.22
USF1-204ENST00000472217 FAM181BA6NEQ2 426 aa7.43□□□□□ -1.22
USF1-204ENST00000472217 NKX6-3A6NJ46 265 aa7.43□□□□□ -1.22
USF1-204ENST00000472217 OR5B21A6NL26 309 aa7.43□□□□□ -1.22
USF1-204ENST00000472217 ZNF732B4DXR9 585 aa7.43□□□□□ -1.22
USF1-204ENST00000472217 LOC110117498-PIK3R3F6TDL0 507 aa7.43□□□□□ -1.22
USF1-204ENST00000472217 GPR37O15354 613 aa7.43□□□□□ -1.22
USF1-204ENST00000472217 MAGEB4O15481 346 aaPredicted RBP7.43□□□□□ -1.22
USF1-204ENST00000472217 SPRY1O43609 319 aaPredicted RBP7.43□□□□□ -1.22
USF1-204ENST00000472217 ATP5HO75947 161 aa7.43□□□□□ -1.22
USF1-204ENST00000472217 TTRP02766 147 aa7.43□□□□□ -1.22
USF1-204ENST00000472217 MELTFP08582 738 aa7.43□□□□□ -1.22
USF1-204ENST00000472217 ATP6V1B1P15313 513 aa7.43□□□□□ -1.22
USF1-204ENST00000472217 MDKP21741 143 aaPredicted RBP7.43□□□□□ -1.22
USF1-204ENST00000472217 OMGP23515 440 aa7.43□□□□□ -1.22
USF1-204ENST00000472217 GNG3P63215 75 aa7.43□□□□□ -1.22
USF1-204ENST00000472217 RIPPLY1Q0D2K3 151 aa7.43□□□□□ -1.22
USF1-204ENST00000472217 LRRC10Q5BKY1 277 aa7.43□□□□□ -1.22
USF1-204ENST00000472217 ZBTB37Q5TC79 503 aa7.43□□□□□ -1.22
USF1-204ENST00000472217 NXNL2Q5VZ03 156 aa7.43□□□□□ -1.22
USF1-204ENST00000472217 PLCXD3Q63HM9 321 aa7.43□□□□□ -1.22
USF1-204ENST00000472217 SHISA2Q6UWI4 295 aa7.43□□□□□ -1.22
USF1-204ENST00000472217 PLEKHG7Q6ZR37 379 aa7.43□□□□□ -1.22
USF1-204ENST00000472217 THAP5Q7Z6K1 395 aa7.43□□□□□ -1.22
USF1-204ENST00000472217 PDZD9Q8IXQ8 264 aa7.43□□□□□ -1.22
USF1-204ENST00000472217 KIR3DL3Q8N743 410 aa7.43□□□□□ -1.22
USF1-204ENST00000472217 OR5A2Q8NGI9 324 aa7.43□□□□□ -1.22
USF1-204ENST00000472217 ANGPTL6Q8NI99 470 aa7.43□□□□□ -1.22
USF1-204ENST00000472217 C8orf46Q8TAG6 207 aa7.43□□□□□ -1.22
USF1-204ENST00000472217 AQP3Q92482 292 aa7.43□□□□□ -1.22
USF1-204ENST00000472217 H1FXQ92522 213 aaKnown RBP7.43□□□□□ -1.22
USF1-204ENST00000472217 ITFG2Q969R8 447 aa7.43□□□□□ -1.22
USF1-204ENST00000472217 TMIGD2Q96BF3 282 aa7.43□□□□□ -1.22
USF1-204ENST00000472217 DMRTB1Q96MA1 342 aa7.43□□□□□ -1.22
USF1-204ENST00000472217 GAFA1Q96PS6 74 aa7.43□□□□□ -1.22
USF1-204ENST00000472217 IL4I1Q96RQ9 567 aa7.43□□□□□ -1.22
USF1-204ENST00000472217 CIB1Q99828 191 aa7.43□□□□□ -1.22
USF1-204ENST00000472217 DCTN5Q9BTE1 182 aa7.43□□□□□ -1.22
USF1-204ENST00000472217 CHIAQ9BZP6 476 aa7.43□□□□□ -1.22
USF1-204ENST00000472217 OR51I2Q9H344 312 aa7.43□□□□□ -1.22
USF1-204ENST00000472217 UNKLQ9H9P5 680 aaKnown RBP7.43□□□□□ -1.22
USF1-204ENST00000472217 CLN6Q9NWW5 311 aa7.43□□□□□ -1.22
USF1-204ENST00000472217 H2AFY2Q9P0M6 372 aaPredicted RBP7.43□□□□□ -1.22
USF1-204ENST00000472217 NLKQ9UBE8 527 aa7.43□□□□□ -1.22
USF1-204ENST00000472217 ENOPH1Q9UHY7 261 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms