RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 ZNF273Q14593 569 aa5.5□□□□□ -1.53
HDAC1-204ENST00000471488 SLC35F1Q5T1Q4 408 aa5.5□□□□□ -1.53
HDAC1-204ENST00000471488 ATPAF1Q5TC12 328 aaPredicted RBP5.5□□□□□ -1.53
HDAC1-204ENST00000471488 TMEM200BQ69YZ2 307 aa5.5□□□□□ -1.53
HDAC1-204ENST00000471488 DRAM2Q6UX65 266 aa5.5□□□□□ -1.53
HDAC1-204ENST00000471488 C18orf65Q6ZTR6 163 aa5.5□□□□□ -1.53
HDAC1-204ENST00000471488 FAM57BQ71RH2 274 aa5.5□□□□□ -1.53
HDAC1-204ENST00000471488 CYP4Z1Q86W10 505 aa5.5□□□□□ -1.53
HDAC1-204ENST00000471488 OFCC1Q8IZS5 231 aa5.5□□□□□ -1.53
HDAC1-204ENST00000471488 OR51L1Q8NGJ5 315 aa5.5□□□□□ -1.53
HDAC1-204ENST00000471488 FANK1Q8TC84 345 aa5.5□□□□□ -1.53
HDAC1-204ENST00000471488 AKR1E2Q96JD6 320 aa5.5□□□□□ -1.53
HDAC1-204ENST00000471488 DNTTIP1Q9H147 329 aa5.5□□□□□ -1.53
HDAC1-204ENST00000471488 RABEP2Q9H5N1 569 aa5.5□□□□□ -1.53
HDAC1-204ENST00000471488 OPA3Q9H6K4 179 aa5.5□□□□□ -1.53
HDAC1-204ENST00000471488 ZMAT4Q9H898 229 aa5.5□□□□□ -1.53
HDAC1-204ENST00000471488 SP140LQ9H930 580 aa5.5□□□□□ -1.53
HDAC1-204ENST00000471488 PNRC2Q9NPJ4 139 aaKnown RBP5.5□□□□□ -1.53
HDAC1-204ENST00000471488 NRIP3Q9NQ35 241 aa5.5□□□□□ -1.53
HDAC1-204ENST00000471488 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.5□□□□□ -1.53
HDAC1-204ENST00000471488 CYB5R1Q9UHQ9 305 aa5.5□□□□□ -1.53
HDAC1-204ENST00000471488 V9GYY5 206 aaPredicted RBP5.5□□□□□ -1.53
HDAC1-204ENST00000471488 IGKV1D-17A0A075B6S4 117 aa5.49□□□□□ -1.53
HDAC1-204ENST00000471488 RBMY1BA6NDE4 496 aaKnown RBP5.49□□□□□ -1.53
HDAC1-204ENST00000471488 RBMY1EA6NEQ0 496 aaKnown RBP5.49□□□□□ -1.53
HDAC1-204ENST00000471488 RFPL4AA6NLU0 287 aa5.49□□□□□ -1.53
HDAC1-204ENST00000471488 VGLL3A8MV65 326 aa5.49□□□□□ -1.53
HDAC1-204ENST00000471488 RFPL4AL1F8VTS6 287 aa5.49□□□□□ -1.53
HDAC1-204ENST00000471488 GSTA4O15217 222 aa5.49□□□□□ -1.53
HDAC1-204ENST00000471488 RBMY1DP0C7P1 496 aaKnown RBP5.49□□□□□ -1.53
HDAC1-204ENST00000471488 PSG2P11465 335 aa5.49□□□□□ -1.53
HDAC1-204ENST00000471488 HIST1H1CP16403 213 aaKnown RBP5.49□□□□□ -1.53
HDAC1-204ENST00000471488 KDELR2P33947 212 aa5.49□□□□□ -1.53
HDAC1-204ENST00000471488 DDOSTP39656 456 aa5.49□□□□□ -1.53
HDAC1-204ENST00000471488 GSK3AP49840 483 aa5.49□□□□□ -1.53
HDAC1-204ENST00000471488 ENTPD1P49961 510 aa5.49□□□□□ -1.53
HDAC1-204ENST00000471488 GPM6AP51674 278 aa5.49□□□□□ -1.53
HDAC1-204ENST00000471488 EDDM3BP56851 147 aa5.49□□□□□ -1.53
HDAC1-204ENST00000471488 FAM3AP98173 230 aa5.49□□□□□ -1.53
HDAC1-204ENST00000471488 EIF2B1Q14232 305 aaKnown RBP5.49□□□□□ -1.53
HDAC1-204ENST00000471488 KRTAP27-1Q3LI81 207 aa5.49□□□□□ -1.53
HDAC1-204ENST00000471488 NANOGP8Q6NSW7 305 aa5.49□□□□□ -1.53
HDAC1-204ENST00000471488 LYPD4Q6UWN0 246 aa5.49□□□□□ -1.53
HDAC1-204ENST00000471488 ETV3LQ6ZN32 361 aa5.49□□□□□ -1.53
HDAC1-204ENST00000471488 DPY19L2P2Q6ZN68 376 aa5.49□□□□□ -1.53
HDAC1-204ENST00000471488 THAP5Q7Z6K1 395 aa5.49□□□□□ -1.53
HDAC1-204ENST00000471488 SBSPONQ8IVN8 264 aa5.49□□□□□ -1.53
HDAC1-204ENST00000471488 ZDHHC21Q8IVQ6 265 aa5.49□□□□□ -1.53
HDAC1-204ENST00000471488 RNF113BQ8IZP6 322 aaKnown RBP5.49□□□□□ -1.53
HDAC1-204ENST00000471488 FTMTQ8N4E7 242 aa5.49□□□□□ -1.53
HDAC1-204ENST00000471488 ASCC1Q8N9N2 400 aaKnown RBP5.49□□□□□ -1.53
HDAC1-204ENST00000471488 CYB561A3Q8NBI2 242 aa5.49□□□□□ -1.53
HDAC1-204ENST00000471488 OR52J3Q8NH60 311 aa5.49□□□□□ -1.53
HDAC1-204ENST00000471488 FAM81AQ8TBF8 368 aa5.49□□□□□ -1.53
HDAC1-204ENST00000471488 SLAMF6Q96DU3 332 aa5.49□□□□□ -1.53
HDAC1-204ENST00000471488 MALSU1Q96EH3 234 aa5.49□□□□□ -1.53
HDAC1-204ENST00000471488 PGAM5Q96HS1 289 aa5.49□□□□□ -1.53
HDAC1-204ENST00000471488 ZNF488Q96MN9 340 aa5.49□□□□□ -1.53
HDAC1-204ENST00000471488 SLC25A33Q9BSK2 321 aa5.49□□□□□ -1.53
HDAC1-204ENST00000471488 TMEM109Q9BVC6 243 aa5.49□□□□□ -1.53
HDAC1-204ENST00000471488 KRCC1Q9NPI7 259 aaPredicted RBP5.49□□□□□ -1.53
HDAC1-204ENST00000471488 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.49□□□□□ -1.53
HDAC1-204ENST00000471488 LINC00527Q9UJ94 153 aa5.49□□□□□ -1.53
HDAC1-204ENST00000471488 SIGLEC7Q9Y286 467 aa5.49□□□□□ -1.53
HDAC1-204ENST00000471488 TBL2Q9Y4P3 447 aaKnown RBP5.49□□□□□ -1.53
HDAC1-204ENST00000471488 LSM4Q9Y4Z0 139 aaKnown RBP5.49□□□□□ -1.53
HDAC1-204ENST00000471488 GMEB1Q9Y692 573 aa5.49□□□□□ -1.53
HDAC1-204ENST00000471488 SMAD5-AS1Q9Y6J3 95 aa5.49□□□□□ -1.53
HDAC1-204ENST00000471488 FAM172BPA6NC97 362 aa5.48□□□□□ -1.53
HDAC1-204ENST00000471488 OR6C68A6NDL8 312 aa5.48□□□□□ -1.53
HDAC1-204ENST00000471488 SEC14L6B5MCN3 397 aa5.48□□□□□ -1.53
HDAC1-204ENST00000471488 FFAR1O14842 300 aa5.48□□□□□ -1.53
HDAC1-204ENST00000471488 JTBO76095 146 aa5.48□□□□□ -1.53
HDAC1-204ENST00000471488 SNRNP70P08621 437 aaKnown RBP5.48□□□□□ -1.53
HDAC1-204ENST00000471488 AZGP1P25311 298 aaKnown RBP5.48□□□□□ -1.53
HDAC1-204ENST00000471488 SLC6A6P31641 620 aa5.48□□□□□ -1.53
HDAC1-204ENST00000471488 MYCNOSP40205 109 aa5.48□□□□□ -1.53
HDAC1-204ENST00000471488 GZMMP51124 257 aa5.48□□□□□ -1.53
HDAC1-204ENST00000471488 MAGOHP61326 146 aaKnown RBP5.48□□□□□ -1.53
HDAC1-204ENST00000471488 ACTA2P62736 377 aa5.48□□□□□ -1.53
HDAC1-204ENST00000471488 RPL23AP62750 156 aaKnown RBP5.48□□□□□ -1.53
HDAC1-204ENST00000471488 ACTG2P63267 376 aa5.48□□□□□ -1.53
HDAC1-204ENST00000471488 SELENOWP63302 87 aa5.48□□□□□ -1.53
HDAC1-204ENST00000471488 ACTC1P68032 377 aa5.48□□□□□ -1.53
HDAC1-204ENST00000471488 ACTA1P68133 377 aa5.48□□□□□ -1.53
HDAC1-204ENST00000471488 MXRA7P84157 204 aa5.48□□□□□ -1.53
HDAC1-204ENST00000471488 SPIBQ01892 262 aa5.48□□□□□ -1.53
HDAC1-204ENST00000471488 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.48□□□□□ -1.53
HDAC1-204ENST00000471488 EDDM3AQ14507 147 aa5.48□□□□□ -1.53
HDAC1-204ENST00000471488 DEFB136Q30KP8 78 aa5.48□□□□□ -1.53
HDAC1-204ENST00000471488 IFI44LQ53G44 452 aa5.48□□□□□ -1.53
HDAC1-204ENST00000471488 CEP78Q5JTW2 689 aa5.48□□□□□ -1.53
HDAC1-204ENST00000471488 ERICH5Q6P6B1 374 aa5.48□□□□□ -1.53
HDAC1-204ENST00000471488 COMMD2Q86X83 199 aa5.48□□□□□ -1.53
HDAC1-204ENST00000471488 ZNF676Q8N7Q3 588 aa5.48□□□□□ -1.53
HDAC1-204ENST00000471488 CSNK2A3Q8NEV1 391 aa5.48□□□□□ -1.53
HDAC1-204ENST00000471488 OR6K6Q8NGW6 343 aa5.48□□□□□ -1.53
HDAC1-204ENST00000471488 OR10Z1Q8NGY1 313 aa5.48□□□□□ -1.53
HDAC1-204ENST00000471488 OR5K1Q8NHB7 308 aa5.48□□□□□ -1.53
HDAC1-204ENST00000471488 TRMT10AQ8TBZ6 339 aaKnown RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms