RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 RFX2P48378 723 aa8.07□□□□□ -1.12
VPS52-216ENST00000471309 ATP1B3P54709 279 aa8.07□□□□□ -1.12
VPS52-216ENST00000471309 UCP2P55851 309 aa8.07□□□□□ -1.12
VPS52-216ENST00000471309 GTF3C1Q12789 2109 aa8.07□□□□□ -1.12
VPS52-216ENST00000471309 ZNF57Q68EA5 555 aaPredicted RBP8.07□□□□□ -1.12
VPS52-216ENST00000471309 OR10K2Q6IF99 312 aa8.07□□□□□ -1.12
VPS52-216ENST00000471309 MZT2BQ6NZ67 158 aa8.07□□□□□ -1.12
VPS52-216ENST00000471309 ASCL4Q6XD76 172 aa8.07□□□□□ -1.12
VPS52-216ENST00000471309 MOB3CQ70IA8 216 aa8.07□□□□□ -1.12
VPS52-216ENST00000471309 GDPD3Q7L5L3 318 aa8.07□□□□□ -1.12
VPS52-216ENST00000471309 SSX8Q7RTT4 187 aa8.07□□□□□ -1.12
VPS52-216ENST00000471309 NRARPQ7Z6K4 114 aa8.07□□□□□ -1.12
VPS52-216ENST00000471309 C1orf174Q8IYL3 243 aa8.07□□□□□ -1.12
VPS52-216ENST00000471309 ZDHHC23Q8IYP9 409 aa8.07□□□□□ -1.12
VPS52-216ENST00000471309 RELL2Q8NC24 303 aaPredicted RBP8.07□□□□□ -1.12
VPS52-216ENST00000471309 OR5D18Q8NGL1 313 aa8.07□□□□□ -1.12
VPS52-216ENST00000471309 HPSE2Q8WWQ2 592 aa8.07□□□□□ -1.12
VPS52-216ENST00000471309 PIGCQ92535 297 aa8.07□□□□□ -1.12
VPS52-216ENST00000471309 RND1Q92730 232 aa8.07□□□□□ -1.12
VPS52-216ENST00000471309 S100A13Q99584 98 aa8.07□□□□□ -1.12
VPS52-216ENST00000471309 C7orf50Q9BRJ6 194 aaKnown RBP8.07□□□□□ -1.12
VPS52-216ENST00000471309 TMEM59Q9BXS4 323 aa8.07□□□□□ -1.12
VPS52-216ENST00000471309 BCL2L14Q9BZR8 327 aa8.07□□□□□ -1.12
VPS52-216ENST00000471309 ACTR6Q9GZN1 396 aa8.07□□□□□ -1.12
VPS52-216ENST00000471309 LPAR5Q9H1C0 372 aa8.07□□□□□ -1.12
VPS52-216ENST00000471309 SCPEP1Q9HB40 452 aa8.07□□□□□ -1.12
VPS52-216ENST00000471309 IL36GQ9NZH8 169 aa8.07□□□□□ -1.12
VPS52-216ENST00000471309 MRPL15Q9P015 296 aaKnown RBP8.07□□□□□ -1.12
VPS52-216ENST00000471309 MEMO1Q9Y316 297 aa8.07□□□□□ -1.12
VPS52-216ENST00000471309 MPC1Q9Y5U8 109 aa8.07□□□□□ -1.12
VPS52-216ENST00000471309 IGF2RP11717 2491 aa8.07□□□□□ -1.12
VPS52-216ENST00000471309 FRYQ5TBA9 3013 aa8.07□□□□□ -1.12
VPS52-216ENST00000471309 IGHV2OR16-5A0A0B4J2B6 119 aa8.06□□□□□ -1.12
VPS52-216ENST00000471309 TRGV8A0A0C4DH27 118 aa8.06□□□□□ -1.12
VPS52-216ENST00000471309 LINC00854A0A1B0GVQ3 168 aa8.06□□□□□ -1.12
VPS52-216ENST00000471309 PQLC2LA1A4F0 135 aa8.06□□□□□ -1.12
VPS52-216ENST00000471309 OR5B21A6NL26 309 aa8.06□□□□□ -1.12
VPS52-216ENST00000471309 ANKRD30BLA7E2S9 258 aa8.06□□□□□ -1.12
VPS52-216ENST00000471309 RAB27BO00194 218 aa8.06□□□□□ -1.12
VPS52-216ENST00000471309 SULT1C2O00338 296 aa8.06□□□□□ -1.12
VPS52-216ENST00000471309 ZNF780AO75290 641 aaPredicted RBP8.06□□□□□ -1.12
VPS52-216ENST00000471309 CRTAPO75718 401 aaPredicted RBP8.06□□□□□ -1.12
VPS52-216ENST00000471309 MPIG6BO95866 241 aa8.06□□□□□ -1.12
VPS52-216ENST00000471309 ECDO95905 644 aaPredicted RBP8.06□□□□□ -1.12
VPS52-216ENST00000471309 CHRM2P08172 466 aa8.06□□□□□ -1.12
VPS52-216ENST00000471309 FAM157BP0CG42 384 aa8.06□□□□□ -1.12
VPS52-216ENST00000471309 RAC2P15153 192 aa8.06□□□□□ -1.12
VPS52-216ENST00000471309 SPNP16150 400 aa8.06□□□□□ -1.12
VPS52-216ENST00000471309 PRSS3P35030 304 aa8.06□□□□□ -1.12
VPS52-216ENST00000471309 GDNFP39905 211 aa8.06□□□□□ -1.12
VPS52-216ENST00000471309 RAD52P43351 418 aa8.06□□□□□ -1.12
VPS52-216ENST00000471309 AP3S2P59780 193 aa8.06□□□□□ -1.12
VPS52-216ENST00000471309 RPS27AP62979 156 aaKnown RBP8.06□□□□□ -1.12
VPS52-216ENST00000471309 NAAAQ02083 359 aa8.06□□□□□ -1.12
VPS52-216ENST00000471309 SSBP1Q04837 148 aaKnown RBP8.06□□□□□ -1.12
VPS52-216ENST00000471309 KLF9Q13886 244 aaPredicted RBP8.06□□□□□ -1.12
VPS52-216ENST00000471309 GPR176Q14439 515 aa8.06□□□□□ -1.12
VPS52-216ENST00000471309 PPA1Q15181 289 aa8.06□□□□□ -1.12
VPS52-216ENST00000471309 CEACAM21Q3KPI0 293 aa8.06□□□□□ -1.12
VPS52-216ENST00000471309 MOGAT2Q3SYC2 334 aa8.06□□□□□ -1.12
VPS52-216ENST00000471309 RNASE12Q5GAN4 147 aaKnown RBP8.06□□□□□ -1.12
VPS52-216ENST00000471309 DMRTC1Q5HYR2 192 aa8.06□□□□□ -1.12
VPS52-216ENST00000471309 CCBE1Q6UXH8 406 aaPredicted RBP8.06□□□□□ -1.12
VPS52-216ENST00000471309 NCCRP1Q6ZVX7 275 aaPredicted RBP8.06□□□□□ -1.12
VPS52-216ENST00000471309 LIX1LQ8IVB5 337 aa8.06□□□□□ -1.12
VPS52-216ENST00000471309 TOMM5Q8N4H5 51 aa8.06□□□□□ -1.12
VPS52-216ENST00000471309 ACBD4Q8NC06 268 aa8.06□□□□□ -1.12
VPS52-216ENST00000471309 TMEM104Q8NE00 496 aa8.06□□□□□ -1.12
VPS52-216ENST00000471309 PXT1Q8NFP0 134 aa8.06□□□□□ -1.12
VPS52-216ENST00000471309 OR1J1Q8NGS3 322 aa8.06□□□□□ -1.12
VPS52-216ENST00000471309 OR52I2Q8NH67 350 aa8.06□□□□□ -1.12
VPS52-216ENST00000471309 SLC25A40Q8TBP6 338 aa8.06□□□□□ -1.12
VPS52-216ENST00000471309 DEDD2Q8WXF8 326 aa8.06□□□□□ -1.12
VPS52-216ENST00000471309 OR5P3Q8WZ94 311 aa8.06□□□□□ -1.12
VPS52-216ENST00000471309 GCDHQ92947 438 aaPredicted RBP8.06□□□□□ -1.12
VPS52-216ENST00000471309 MUCL1Q96DR8 90 aa8.06□□□□□ -1.12
VPS52-216ENST00000471309 URM1Q9BTM9 101 aaKnown RBP8.06□□□□□ -1.12
VPS52-216ENST00000471309 TM2D1Q9BX74 207 aa8.06□□□□□ -1.12
VPS52-216ENST00000471309 C1QTNF6Q9BXI9 259 aa8.06□□□□□ -1.12
VPS52-216ENST00000471309 OR51B6Q9H340 312 aa8.06□□□□□ -1.12
VPS52-216ENST00000471309 RBFOX1Q9NWB1 397 aaKnown RBP8.06□□□□□ -1.12
VPS52-216ENST00000471309 MYEF2Q9P2K5 600 aaKnown RBP8.06□□□□□ -1.12
VPS52-216ENST00000471309 CACNG2Q9Y698 323 aa8.06□□□□□ -1.12
VPS52-216ENST00000471309 FASNP49327 2511 aaKnown RBP8.06□□□□□ -1.12
VPS52-216ENST00000471309 PKD1L2Q7Z442 2459 aa8.06□□□□□ -1.12
VPS52-216ENST00000471309 hCG_2014768A0A024R1R8 64 aa8.05□□□□□ -1.12
VPS52-216ENST00000471309 A0A1W2PP11 408 aa8.05□□□□□ -1.12
VPS52-216ENST00000471309 MEIOCA2RUB1 952 aa8.05□□□□□ -1.12
VPS52-216ENST00000471309 CENPXA8MT69 81 aa8.05□□□□□ -1.12
VPS52-216ENST00000471309 IQCF6A8MYZ5 107 aa8.05□□□□□ -1.12
VPS52-216ENST00000471309 C16orf97H3BN30 126 aa8.05□□□□□ -1.12
VPS52-216ENST00000471309 H7C417 338 aa8.05□□□□□ -1.12
VPS52-216ENST00000471309 ORC5O43913 435 aa8.05□□□□□ -1.12
VPS52-216ENST00000471309 LPLP06858 475 aa8.05□□□□□ -1.12
VPS52-216ENST00000471309 TMEM225BP0DP42 221 aa8.05□□□□□ -1.12
VPS52-216ENST00000471309 MGMTP16455 207 aa8.05□□□□□ -1.12
VPS52-216ENST00000471309 CPT2P23786 658 aa8.05□□□□□ -1.12
VPS52-216ENST00000471309 FAM27E3Q08E93 113 aa8.05□□□□□ -1.12
VPS52-216ENST00000471309 PDZK1IP1Q13113 114 aa8.05□□□□□ -1.12
VPS52-216ENST00000471309 DYRK1AQ13627 763 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms