RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 MUC20Q8N307 709 aaPredicted RBP16.57■□□□□ 0.24
HDAC7-220ENST00000471235 SPICQ8N5J4 248 aa16.57■□□□□ 0.24
HDAC7-220ENST00000471235 GCSAMQ8N6F7 178 aa16.57■□□□□ 0.24
HDAC7-220ENST00000471235 LINC01356Q8N9X3 169 aa16.57■□□□□ 0.24
HDAC7-220ENST00000471235 C19orf18Q8NEA5 215 aa16.57■□□□□ 0.24
HDAC7-220ENST00000471235 OR10AC1Q8NH08 325 aa16.57■□□□□ 0.24
HDAC7-220ENST00000471235 HAVCR2Q8TDQ0 301 aa16.57■□□□□ 0.24
HDAC7-220ENST00000471235 METTL17Q9H7H0 456 aaPredicted RBP16.57■□□□□ 0.24
HDAC7-220ENST00000471235 SONP18583 2426 aaKnown RBP16.57■□□□□ 0.24
HDAC7-220ENST00000471235 PPIAL4EA0A075B759 164 aa16.56■□□□□ 0.24
HDAC7-220ENST00000471235 OR5B21A6NL26 309 aa16.56■□□□□ 0.24
HDAC7-220ENST00000471235 ZNF732B4DXR9 585 aa16.56■□□□□ 0.24
HDAC7-220ENST00000471235 PPIAL4DF5H284 164 aa16.56■□□□□ 0.24
HDAC7-220ENST00000471235 FSTL3O95633 263 aa16.56■□□□□ 0.24
HDAC7-220ENST00000471235 PPIAL4FP0DN26 164 aa16.56■□□□□ 0.24
HDAC7-220ENST00000471235 ZNF12P17014 697 aa16.56■□□□□ 0.24
HDAC7-220ENST00000471235 GTF2A1P52655 376 aaPredicted RBP16.56■□□□□ 0.24
HDAC7-220ENST00000471235 GNG3P63215 75 aa16.56■□□□□ 0.24
HDAC7-220ENST00000471235 MED21Q13503 144 aa16.56■□□□□ 0.24
HDAC7-220ENST00000471235 ZNF404Q494X3 552 aa16.56■□□□□ 0.24
HDAC7-220ENST00000471235 XAF1Q6GPH4 301 aa16.56■□□□□ 0.24
HDAC7-220ENST00000471235 WDR82Q6UXN9 313 aa16.56■□□□□ 0.24
HDAC7-220ENST00000471235 STX19Q8N4C7 294 aa16.56■□□□□ 0.24
HDAC7-220ENST00000471235 ZNF676Q8N7Q3 588 aa16.56■□□□□ 0.24
HDAC7-220ENST00000471235 BOLLQ8N9W6 283 aaKnown RBP16.56■□□□□ 0.24
HDAC7-220ENST00000471235 OR52N1Q8NH53 320 aa16.56■□□□□ 0.24
HDAC7-220ENST00000471235 LRRC29Q8WV35 223 aa16.56■□□□□ 0.24
HDAC7-220ENST00000471235 RPL3LQ92901 407 aaKnown RBP16.56■□□□□ 0.24
HDAC7-220ENST00000471235 HIST1H2AAQ96QV6 131 aa16.56■□□□□ 0.24
HDAC7-220ENST00000471235 TMEM165Q9HC07 324 aa16.56■□□□□ 0.24
HDAC7-220ENST00000471235 PPIAL4AQ9Y536 164 aa16.56■□□□□ 0.24
HDAC7-220ENST00000471235 WNK2Q9Y3S1 2297 aa16.56■□□□□ 0.24
HDAC7-220ENST00000471235 ANKRD61A6NGH8 418 aa16.55■□□□□ 0.24
HDAC7-220ENST00000471235 CEACAM18A8MTB9 384 aa16.55■□□□□ 0.24
HDAC7-220ENST00000471235 INAFM1C9JVW0 142 aa16.55■□□□□ 0.24
HDAC7-220ENST00000471235 F5H0A9 414 aaPredicted RBP16.55■□□□□ 0.24
HDAC7-220ENST00000471235 CCDC159P0C7I6 412 aa16.55■□□□□ 0.24
HDAC7-220ENST00000471235 CDK5R1Q15078 307 aa16.55■□□□□ 0.24
HDAC7-220ENST00000471235 FAM76BQ5HYJ3 339 aa16.55■□□□□ 0.24
HDAC7-220ENST00000471235 FAM166AQ6J272 317 aa16.55■□□□□ 0.24
HDAC7-220ENST00000471235 SCCPDHQ8NBX0 429 aa16.55■□□□□ 0.24
HDAC7-220ENST00000471235 ZNF485Q8NCK3 441 aa16.55■□□□□ 0.24
HDAC7-220ENST00000471235 OR5A2Q8NGI9 324 aa16.55■□□□□ 0.24
HDAC7-220ENST00000471235 OR51A4Q8NGJ6 313 aa16.55■□□□□ 0.24
HDAC7-220ENST00000471235 RPS4Y2Q8TD47 263 aa16.55■□□□□ 0.24
HDAC7-220ENST00000471235 ADAT3Q96EY9 351 aaPredicted RBP16.55■□□□□ 0.24
HDAC7-220ENST00000471235 TMEM246Q9BRR3 403 aa16.55■□□□□ 0.24
HDAC7-220ENST00000471235 CHST5Q9GZS9 411 aa16.55■□□□□ 0.24
HDAC7-220ENST00000471235 OR51I2Q9H344 312 aa16.55■□□□□ 0.24
HDAC7-220ENST00000471235 PATZ1Q9HBE1 687 aaKnown RBP16.55■□□□□ 0.24
HDAC7-220ENST00000471235 LPAR2Q9HBW0 351 aa16.55■□□□□ 0.24
HDAC7-220ENST00000471235 PAK1IP1Q9NWT1 392 aaPredicted RBP16.55■□□□□ 0.24
HDAC7-220ENST00000471235 CHCHD3Q9NX63 227 aaKnown RBP16.55■□□□□ 0.24
HDAC7-220ENST00000471235 HHLA2Q9UM44 414 aa16.55■□□□□ 0.24
HDAC7-220ENST00000471235 ANK3Q12955 4377 aaKnown RBP16.54■□□□□ 0.24
HDAC7-220ENST00000471235 TMEM212A6NML5 194 aa16.54■□□□□ 0.24
HDAC7-220ENST00000471235 A8MV72 311 aaPredicted RBP16.54■□□□□ 0.24
HDAC7-220ENST00000471235 B4DSR2 109 aa16.54■□□□□ 0.24
HDAC7-220ENST00000471235 LGALS8O00214 317 aa16.54■□□□□ 0.24
HDAC7-220ENST00000471235 CDIPTO14735 213 aa16.54■□□□□ 0.24
HDAC7-220ENST00000471235 ZFPL1O95159 310 aa16.54■□□□□ 0.24
HDAC7-220ENST00000471235 LALBAP00709 142 aa16.54■□□□□ 0.24
HDAC7-220ENST00000471235 TGFAP01135 160 aa16.54■□□□□ 0.24
HDAC7-220ENST00000471235 LHBP01229 141 aa16.54■□□□□ 0.24
HDAC7-220ENST00000471235 C21orf33P30042 268 aaPredicted RBP16.54■□□□□ 0.24
HDAC7-220ENST00000471235 OR5AK2Q8NH90 309 aa16.54■□□□□ 0.24
HDAC7-220ENST00000471235 C10orf35Q96D05 121 aa16.54■□□□□ 0.24
HDAC7-220ENST00000471235 CNBD2Q96M20 576 aa16.54■□□□□ 0.24
HDAC7-220ENST00000471235 PDCD1LG2Q9BQ51 273 aa16.54■□□□□ 0.24
HDAC7-220ENST00000471235 RAB26Q9ULW5 256 aa16.54■□□□□ 0.24
HDAC7-220ENST00000471235 PCDHB10Q9UN67 800 aa16.54■□□□□ 0.24
HDAC7-220ENST00000471235 TRBV2A0A0J9YWF9 115 aa16.53■□□□□ 0.24
HDAC7-220ENST00000471235 PQLC2LA1A4F0 135 aa16.53■□□□□ 0.24
HDAC7-220ENST00000471235 C3orf80F5H4A9 247 aa16.53■□□□□ 0.24
HDAC7-220ENST00000471235 GATBO75879 557 aaKnown RBP16.53■□□□□ 0.24
HDAC7-220ENST00000471235 CDK1P06493 297 aa16.53■□□□□ 0.24
HDAC7-220ENST00000471235 MSMBP08118 114 aa16.53■□□□□ 0.24
HDAC7-220ENST00000471235 CFHR2P36980 270 aa16.53■□□□□ 0.24
HDAC7-220ENST00000471235 SEC61A1P61619 476 aaKnown RBP16.53■□□□□ 0.24
HDAC7-220ENST00000471235 UBE2V2Q15819 145 aa16.53■□□□□ 0.24
HDAC7-220ENST00000471235 CCDC58Q4VC31 144 aa16.53■□□□□ 0.24
HDAC7-220ENST00000471235 RPL22L1Q6P5R6 122 aaKnown RBP16.53■□□□□ 0.24
HDAC7-220ENST00000471235 DEFB108BQ8NET1 73 aa16.53■□□□□ 0.24
HDAC7-220ENST00000471235 OR13C3Q8NGS6 347 aa16.53■□□□□ 0.24
HDAC7-220ENST00000471235 OR10Z1Q8NGY1 313 aa16.53■□□□□ 0.24
HDAC7-220ENST00000471235 OR51F2Q8NH61 342 aa16.53■□□□□ 0.24
HDAC7-220ENST00000471235 GATAD2BQ8WXI9 593 aa16.53■□□□□ 0.24
HDAC7-220ENST00000471235 RGP1Q92546 391 aaPredicted RBP16.53■□□□□ 0.24
HDAC7-220ENST00000471235 SGCDQ92629 289 aa16.53■□□□□ 0.24
HDAC7-220ENST00000471235 COMMD4Q9H0A8 199 aa16.53■□□□□ 0.24
HDAC7-220ENST00000471235 SCN3BQ9NY72 215 aa16.53■□□□□ 0.24
HDAC7-220ENST00000471235 ERVK-18Q9QC07 812 aa16.53■□□□□ 0.24
HDAC7-220ENST00000471235 KCNS2Q9ULS6 477 aa16.53■□□□□ 0.24
HDAC7-220ENST00000471235 PCDHGB5Q9Y5G0 923 aa16.53■□□□□ 0.24
HDAC7-220ENST00000471235 SIRT4Q9Y6E7 314 aaPredicted RBP16.53■□□□□ 0.24
HDAC7-220ENST00000471235 OOEPA6NGQ2 149 aa16.52■□□□□ 0.24
HDAC7-220ENST00000471235 SRRM5B3KS81 715 aa16.52■□□□□ 0.24
HDAC7-220ENST00000471235 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.52■□□□□ 0.24
HDAC7-220ENST00000471235 MYL12BO14950 172 aa16.52■□□□□ 0.24
HDAC7-220ENST00000471235 RPS2P15880 293 aaKnown RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms