RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 GNG2P59768 71 aa8.09□□□□□ -1.11
SMC1A-205ENST00000469129 MEF2DQ14814 521 aa8.09□□□□□ -1.11
SMC1A-205ENST00000469129 P2RY6Q15077 328 aa8.09□□□□□ -1.11
SMC1A-205ENST00000469129 PPA1Q15181 289 aa8.09□□□□□ -1.11
SMC1A-205ENST00000469129 RSU1Q15404 277 aa8.09□□□□□ -1.11
SMC1A-205ENST00000469129 RBMS2Q15434 407 aaKnown RBP8.09□□□□□ -1.11
SMC1A-205ENST00000469129 GABRA6Q16445 453 aa8.09□□□□□ -1.11
SMC1A-205ENST00000469129 TBR1Q16650 682 aa8.09□□□□□ -1.11
SMC1A-205ENST00000469129 ZNF260Q3ZCT1 412 aa8.09□□□□□ -1.11
SMC1A-205ENST00000469129 ACTBL2Q562R1 376 aa8.09□□□□□ -1.11
SMC1A-205ENST00000469129 C1QTNF12Q5T7M4 302 aa8.09□□□□□ -1.11
SMC1A-205ENST00000469129 OR10K2Q6IF99 312 aa8.09□□□□□ -1.11
SMC1A-205ENST00000469129 MTFR2Q6P444 385 aa8.09□□□□□ -1.11
SMC1A-205ENST00000469129 BEND4Q6ZU67 534 aa8.09□□□□□ -1.11
SMC1A-205ENST00000469129 BIVMQ86UB2 503 aa8.09□□□□□ -1.11
SMC1A-205ENST00000469129 ZDHHC23Q8IYP9 409 aa8.09□□□□□ -1.11
SMC1A-205ENST00000469129 DRAXINQ8NBI3 349 aaPredicted RBP8.09□□□□□ -1.11
SMC1A-205ENST00000469129 OR56B2PQ8NGI1 322 aa8.09□□□□□ -1.11
SMC1A-205ENST00000469129 FAM57AQ8TBR7 257 aa8.09□□□□□ -1.11
SMC1A-205ENST00000469129 RAB3CQ96E17 227 aa8.09□□□□□ -1.11
SMC1A-205ENST00000469129 SEH1LQ96EE3 360 aa8.09□□□□□ -1.11
SMC1A-205ENST00000469129 GAL3ST1Q99999 423 aa8.09□□□□□ -1.11
SMC1A-205ENST00000469129 REPIN1Q9BWE0 567 aaKnown RBP8.09□□□□□ -1.11
SMC1A-205ENST00000469129 TM2D1Q9BX74 207 aa8.09□□□□□ -1.11
SMC1A-205ENST00000469129 IFT46Q9NQC8 304 aa8.09□□□□□ -1.11
SMC1A-205ENST00000469129 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.09□□□□□ -1.11
SMC1A-205ENST00000469129 PLSCR4Q9NRQ2 329 aa8.09□□□□□ -1.11
SMC1A-205ENST00000469129 MCUBQ9NWR8 336 aa8.09□□□□□ -1.11
SMC1A-205ENST00000469129 PTTG3PQ9NZH4 202 aa8.09□□□□□ -1.11
SMC1A-205ENST00000469129 IL36GQ9NZH8 169 aa8.09□□□□□ -1.11
SMC1A-205ENST00000469129 EIF3KQ9UBQ5 218 aaKnown RBP8.09□□□□□ -1.11
SMC1A-205ENST00000469129 TP53TG5Q9Y2B4 290 aa8.09□□□□□ -1.11
SMC1A-205ENST00000469129 AMDHD2Q9Y303 409 aa8.09□□□□□ -1.11
SMC1A-205ENST00000469129 NOP16Q9Y3C1 178 aaKnown RBP8.09□□□□□ -1.11
SMC1A-205ENST00000469129 ZZEF1O43149 2961 aa8.09□□□□□ -1.11
SMC1A-205ENST00000469129 ZFHX4Q86UP3 3567 aa8.08□□□□□ -1.12
SMC1A-205ENST00000469129 TRAV6A0A075B6T7 132 aa8.08□□□□□ -1.12
SMC1A-205ENST00000469129 A0A0B4J293 547 aa8.08□□□□□ -1.12
SMC1A-205ENST00000469129 FAM230AA0A1W2PPH8 454 aa8.08□□□□□ -1.12
SMC1A-205ENST00000469129 C7orf66A4D0T2 115 aa8.08□□□□□ -1.12
SMC1A-205ENST00000469129 ZNF503-AS2A6NEH8 195 aa8.08□□□□□ -1.12
SMC1A-205ENST00000469129 TMEM235A6NFC5 223 aa8.08□□□□□ -1.12
SMC1A-205ENST00000469129 ANKRD30BLA7E2S9 258 aa8.08□□□□□ -1.12
SMC1A-205ENST00000469129 PEX14O75381 377 aa8.08□□□□□ -1.12
SMC1A-205ENST00000469129 CA11O75493 328 aa8.08□□□□□ -1.12
SMC1A-205ENST00000469129 LYZL6O75951 148 aa8.08□□□□□ -1.12
SMC1A-205ENST00000469129 NDUFB6O95139 128 aa8.08□□□□□ -1.12
SMC1A-205ENST00000469129 CST4P01036 141 aa8.08□□□□□ -1.12
SMC1A-205ENST00000469129 MELTFP08582 738 aa8.08□□□□□ -1.12
SMC1A-205ENST00000469129 TMEM225BP0DP42 221 aa8.08□□□□□ -1.12
SMC1A-205ENST00000469129 PTHLHP12272 177 aa8.08□□□□□ -1.12
SMC1A-205ENST00000469129 HIST1H1DP16402 221 aaKnown RBP8.08□□□□□ -1.12
SMC1A-205ENST00000469129 ZNF14P17017 642 aaPredicted RBP8.08□□□□□ -1.12
SMC1A-205ENST00000469129 SERPINA2P20848 420 aa8.08□□□□□ -1.12
SMC1A-205ENST00000469129 TUBG1P23258 451 aa8.08□□□□□ -1.12
SMC1A-205ENST00000469129 TIMP3P35625 211 aa8.08□□□□□ -1.12
SMC1A-205ENST00000469129 EIF2B2P49770 351 aaKnown RBP8.08□□□□□ -1.12
SMC1A-205ENST00000469129 CCR6P51684 374 aa8.08□□□□□ -1.12
SMC1A-205ENST00000469129 ZP1P60852 638 aa8.08□□□□□ -1.12
SMC1A-205ENST00000469129 RRAS2P62070 204 aaPredicted RBP8.08□□□□□ -1.12
SMC1A-205ENST00000469129 GUCA2AQ02747 115 aa8.08□□□□□ -1.12
SMC1A-205ENST00000469129 TNK1Q13470 666 aa8.08□□□□□ -1.12
SMC1A-205ENST00000469129 GK2Q14410 553 aaPredicted RBP8.08□□□□□ -1.12
SMC1A-205ENST00000469129 MOGAT2Q3SYC2 334 aa8.08□□□□□ -1.12
SMC1A-205ENST00000469129 PLEKHN1Q494U1 663 aaPredicted RBP8.08□□□□□ -1.12
SMC1A-205ENST00000469129 SLC22A6Q4U2R8 563 aa8.08□□□□□ -1.12
SMC1A-205ENST00000469129 STEAP1BQ6NZ63 245 aa8.08□□□□□ -1.12
SMC1A-205ENST00000469129 VWA1Q6PCB0 445 aa8.08□□□□□ -1.12
SMC1A-205ENST00000469129 ZNF782Q6ZMW2 699 aaPredicted RBP8.08□□□□□ -1.12
SMC1A-205ENST00000469129 MOB3CQ70IA8 216 aa8.08□□□□□ -1.12
SMC1A-205ENST00000469129 TRAPPC6BQ86SZ2 158 aa8.08□□□□□ -1.12
SMC1A-205ENST00000469129 CD163Q86VB7 1156 aa8.08□□□□□ -1.12
SMC1A-205ENST00000469129 GLCCI1Q86VQ1 547 aa8.08□□□□□ -1.12
SMC1A-205ENST00000469129 ZSCAN4Q8NAM6 433 aaPredicted RBP8.08□□□□□ -1.12
SMC1A-205ENST00000469129 PXT1Q8NFP0 134 aa8.08□□□□□ -1.12
SMC1A-205ENST00000469129 OR51T1Q8NGJ9 327 aa8.08□□□□□ -1.12
SMC1A-205ENST00000469129 OR5D18Q8NGL1 313 aa8.08□□□□□ -1.12
SMC1A-205ENST00000469129 OR4C16Q8NGL9 310 aa8.08□□□□□ -1.12
SMC1A-205ENST00000469129 PIGCQ92535 297 aa8.08□□□□□ -1.12
SMC1A-205ENST00000469129 MRPS24Q96EL2 167 aaKnown RBP8.08□□□□□ -1.12
SMC1A-205ENST00000469129 ABHD17AQ96GS6 310 aa8.08□□□□□ -1.12
SMC1A-205ENST00000469129 POM121Q96HA1 1249 aa8.08□□□□□ -1.12
SMC1A-205ENST00000469129 HIST1H2AAQ96QV6 131 aa8.08□□□□□ -1.12
SMC1A-205ENST00000469129 SFXN3Q9BWM7 321 aa8.08□□□□□ -1.12
SMC1A-205ENST00000469129 PAPOLGQ9BWT3 736 aaKnown RBP8.08□□□□□ -1.12
SMC1A-205ENST00000469129 TP63Q9H3D4 680 aaPredicted RBP8.08□□□□□ -1.12
SMC1A-205ENST00000469129 ELL3Q9HB65 397 aaPredicted RBP8.08□□□□□ -1.12
SMC1A-205ENST00000469129 TUBG2Q9NRH3 451 aa8.08□□□□□ -1.12
SMC1A-205ENST00000469129 MRPL15Q9P015 296 aaKnown RBP8.08□□□□□ -1.12
SMC1A-205ENST00000469129 MYEF2Q9P2K5 600 aaKnown RBP8.08□□□□□ -1.12
SMC1A-205ENST00000469129 PLEKHA6Q9Y2H5 1048 aa8.08□□□□□ -1.12
SMC1A-205ENST00000469129 MPC1Q9Y5U8 109 aa8.08□□□□□ -1.12
SMC1A-205ENST00000469129 A0A1B0GUH1 482 aa8.07□□□□□ -1.12
SMC1A-205ENST00000469129 OR5B21A6NL26 309 aa8.07□□□□□ -1.12
SMC1A-205ENST00000469129 SERPINE3A8MV23 424 aa8.07□□□□□ -1.12
SMC1A-205ENST00000469129 ZNF736B4DX44 427 aaPredicted RBP8.07□□□□□ -1.12
SMC1A-205ENST00000469129 DISC1C4P0D8 188 aa8.07□□□□□ -1.12
SMC1A-205ENST00000469129 PRRG2O14669 202 aa8.07□□□□□ -1.12
SMC1A-205ENST00000469129 TNFSF13O75888 250 aa8.07□□□□□ -1.12
SMC1A-205ENST00000469129 RAB3DO95716 219 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms