RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 OR5I1Q13606 314 aa10.96□□□□□ -0.66
USP11-206ENST00000469080 SGCBQ16585 318 aa10.96□□□□□ -0.66
USP11-206ENST00000469080 HIST2H3PS2Q5TEC6 136 aa10.96□□□□□ -0.66
USP11-206ENST00000469080 ZNF705AQ6ZN79 300 aaPredicted RBP10.96□□□□□ -0.66
USP11-206ENST00000469080 ATG4DQ86TL0 474 aaPredicted RBP10.96□□□□□ -0.66
USP11-206ENST00000469080 CMTM4Q8IZR5 234 aa10.96□□□□□ -0.66
USP11-206ENST00000469080 INO80EQ8NBZ0 244 aaPredicted RBP10.96□□□□□ -0.66
USP11-206ENST00000469080 OR13C3Q8NGS6 347 aa10.96□□□□□ -0.66
USP11-206ENST00000469080 RNF141Q8WVD5 230 aa10.96□□□□□ -0.66
USP11-206ENST00000469080 DHDHQ9UQ10 334 aa10.96□□□□□ -0.66
USP11-206ENST00000469080 KIAA2026Q5HYC2 2103 aa10.96□□□□□ -0.66
USP11-206ENST00000469080 SNRPGP15A8MWD9 76 aa10.96□□□□□ -0.66
USP11-206ENST00000469080 LMX1BO60663 402 aa10.96□□□□□ -0.66
USP11-206ENST00000469080 ERCC1P07992 297 aaPredicted RBP10.96□□□□□ -0.66
USP11-206ENST00000469080 SOD3P08294 240 aa10.96□□□□□ -0.66
USP11-206ENST00000469080 ZNF43P17038 809 aa10.96□□□□□ -0.66
USP11-206ENST00000469080 SLC2A5P22732 501 aa10.96□□□□□ -0.66
USP11-206ENST00000469080 DCTDP32321 178 aa10.96□□□□□ -0.66
USP11-206ENST00000469080 TDGF1P3P51864 188 aa10.96□□□□□ -0.66
USP11-206ENST00000469080 FZD5Q13467 585 aa10.96□□□□□ -0.66
USP11-206ENST00000469080 CD163Q86VB7 1156 aa10.96□□□□□ -0.66
USP11-206ENST00000469080 CADM4Q8NFZ8 388 aa10.96□□□□□ -0.66
USP11-206ENST00000469080 OR13C9Q8NGT0 318 aa10.96□□□□□ -0.66
USP11-206ENST00000469080 TMEM234Q8WY98 164 aa10.96□□□□□ -0.66
USP11-206ENST00000469080 MVB12AQ96EY5 273 aa10.96□□□□□ -0.66
USP11-206ENST00000469080 PLEKHA1Q9HB21 404 aa10.96□□□□□ -0.66
USP11-206ENST00000469080 ZNF281Q9Y2X9 895 aa10.96□□□□□ -0.66
USP11-206ENST00000469080 CLDN16Q9Y5I7 305 aa10.96□□□□□ -0.66
USP11-206ENST00000469080 V9GY05 133 aa10.96□□□□□ -0.66
USP11-206ENST00000469080 TRAV8-7A0A075B6U6 113 aa10.95□□□□□ -0.66
USP11-206ENST00000469080 TRAV36DV7A0A075B6V5 113 aa10.95□□□□□ -0.66
USP11-206ENST00000469080 A0A0B4J2A0 478 aa10.95□□□□□ -0.66
USP11-206ENST00000469080 A0A1W2PPQ1 181 aa10.95□□□□□ -0.66
USP11-206ENST00000469080 KLF4O43474 513 aa10.95□□□□□ -0.66
USP11-206ENST00000469080 WNT11O96014 354 aa10.95□□□□□ -0.66
USP11-206ENST00000469080 RPS2P15880 293 aaKnown RBP10.95□□□□□ -0.66
USP11-206ENST00000469080 EPHA8P29322 1005 aaPredicted RBP10.95□□□□□ -0.66
USP11-206ENST00000469080 TAS2R43P59537 309 aa10.95□□□□□ -0.66
USP11-206ENST00000469080 ZNF141Q15928 474 aa10.95□□□□□ -0.66
USP11-206ENST00000469080 GGNBP1Q5YKI7 109 aa10.95□□□□□ -0.66
USP11-206ENST00000469080 TEX19Q8NA77 164 aa10.95□□□□□ -0.66
USP11-206ENST00000469080 TERB2Q8NHR7 220 aa10.95□□□□□ -0.66
USP11-206ENST00000469080 S100A16Q96FQ6 103 aaKnown RBP10.95□□□□□ -0.66
USP11-206ENST00000469080 SHPKQ9UHJ6 478 aa10.95□□□□□ -0.66
USP11-206ENST00000469080 DKKL1Q9UK85 242 aa10.95□□□□□ -0.66
USP11-206ENST00000469080 URGCP-MRPS24S4R325 110 aa10.95□□□□□ -0.66
USP11-206ENST00000469080 C4orf17Q53FE4 359 aa10.95□□□□□ -0.66
USP11-206ENST00000469080 KCNRGQ8N5I3 272 aa10.95□□□□□ -0.66
USP11-206ENST00000469080 KCTD12Q96CX2 325 aaKnown RBP10.95□□□□□ -0.66
USP11-206ENST00000469080 SMIM19Q96E16 107 aa10.95□□□□□ -0.66
USP11-206ENST00000469080 RRNAD1Q96FB5 475 aaKnown RBP10.95□□□□□ -0.66
USP11-206ENST00000469080 B3GALT1Q9Y5Z6 326 aa10.95□□□□□ -0.66
USP11-206ENST00000469080 SPTBN4Q9H254 2564 aa10.95□□□□□ -0.66
USP11-206ENST00000469080 ZFAND5O76080 213 aa10.94□□□□□ -0.66
USP11-206ENST00000469080 CRYABP02511 175 aaKnown RBP10.94□□□□□ -0.66
USP11-206ENST00000469080 GTF2F2P13984 249 aa10.94□□□□□ -0.66
USP11-206ENST00000469080 RAB6AP20340 208 aa10.94□□□□□ -0.66
USP11-206ENST00000469080 PTH2RP49190 550 aa10.94□□□□□ -0.66
USP11-206ENST00000469080 P2RX1P51575 399 aa10.94□□□□□ -0.66
USP11-206ENST00000469080 CLDN17P56750 224 aa10.94□□□□□ -0.66
USP11-206ENST00000469080 INSM1Q01101 510 aaPredicted RBP10.94□□□□□ -0.66
USP11-206ENST00000469080 CPEB2Q7Z5Q1 589 aaKnown RBP10.94□□□□□ -0.66
USP11-206ENST00000469080 FAM219AQ8IW50 185 aa10.94□□□□□ -0.66
USP11-206ENST00000469080 ARIH2OSQ8N7S6 290 aa10.94□□□□□ -0.66
USP11-206ENST00000469080 ZNF610Q8N9Z0 462 aa10.94□□□□□ -0.66
USP11-206ENST00000469080 OR10A7Q8NGE5 316 aa10.94□□□□□ -0.66
USP11-206ENST00000469080 OR2AJ1Q8NGZ0 328 aa10.94□□□□□ -0.66
USP11-206ENST00000469080 SMIM4Q8WVI0 70 aa10.94□□□□□ -0.66
USP11-206ENST00000469080 NRIP3Q9NQ35 241 aa10.94□□□□□ -0.66
USP11-206ENST00000469080 CKLFQ9UBR5 152 aa10.94□□□□□ -0.66
USP11-206ENST00000469080 MRM2Q9UI43 246 aaKnown RBP10.94□□□□□ -0.66
USP11-206ENST00000469080 OR5H14A6NHG9 310 aa10.94□□□□□ -0.66
USP11-206ENST00000469080 CCSO14618 274 aa10.94□□□□□ -0.66
USP11-206ENST00000469080 RAMP1O60894 148 aa10.94□□□□□ -0.66
USP11-206ENST00000469080 LYPD3O95274 346 aa10.94□□□□□ -0.66
USP11-206ENST00000469080 THBS4P35443 961 aa10.94□□□□□ -0.66
USP11-206ENST00000469080 POLR2HP52434 150 aaKnown RBP10.94□□□□□ -0.66
USP11-206ENST00000469080 PCGF3Q3KNV8 242 aa10.94□□□□□ -0.66
USP11-206ENST00000469080 CD200R1LQ6Q8B3 271 aa10.94□□□□□ -0.66
USP11-206ENST00000469080 DHRS11Q6UWP2 260 aa10.94□□□□□ -0.66
USP11-206ENST00000469080 SSX7Q7RTT5 188 aa10.94□□□□□ -0.66
USP11-206ENST00000469080 SMIM15Q7Z3B0 74 aa10.94□□□□□ -0.66
USP11-206ENST00000469080 ANKRD37Q7Z713 158 aa10.94□□□□□ -0.66
USP11-206ENST00000469080 ZNF440Q8IYI8 595 aa10.94□□□□□ -0.66
USP11-206ENST00000469080 IL22RA1Q8N6P7 574 aa10.94□□□□□ -0.66
USP11-206ENST00000469080 BEND2Q8NDZ0 799 aa10.94□□□□□ -0.66
USP11-206ENST00000469080 OR14L1PQ8NHC6 308 aa10.94□□□□□ -0.66
USP11-206ENST00000469080 PHYHIPLQ96FC7 376 aa10.94□□□□□ -0.66
USP11-206ENST00000469080 DIRC2Q96SL1 478 aa10.94□□□□□ -0.66
USP11-206ENST00000469080 MRI1Q9BV20 369 aa10.94□□□□□ -0.66
USP11-206ENST00000469080 GAL3ST2Q9H3Q3 398 aa10.94□□□□□ -0.66
USP11-206ENST00000469080 SERINC1Q9NRX5 453 aa10.94□□□□□ -0.66
USP11-206ENST00000469080 SRPK3Q9UPE1 567 aa10.94□□□□□ -0.66
USP11-206ENST00000469080 EXOGQ9Y2C4 368 aaKnown RBP10.94□□□□□ -0.66
USP11-206ENST00000469080 NCOR2Q9Y618 2525 aa10.94□□□□□ -0.66
USP11-206ENST00000469080 ADAMTS9Q9P2N4 1935 aa10.94□□□□□ -0.66
USP11-206ENST00000469080 NSG1A0A0A6YYJ2 146 aa10.94□□□□□ -0.66
USP11-206ENST00000469080 FRG2CA6NGY1 282 aa10.94□□□□□ -0.66
USP11-206ENST00000469080 A8MVM7 634 aa10.94□□□□□ -0.66
USP11-206ENST00000469080 GSTP1P09211 210 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms