RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 ALDH3B1P43353 468 aa16.33■□□□□ 0.21
SMC4-209ENST00000468653 SRP9P49458 86 aaKnown RBP16.33■□□□□ 0.21
SMC4-209ENST00000468653 UCP2P55851 309 aa16.33■□□□□ 0.21
SMC4-209ENST00000468653 UNQ6126/PRO20091Q6UXV3 157 aa16.33■□□□□ 0.21
SMC4-209ENST00000468653 C1QL2Q7Z5L3 287 aa16.33■□□□□ 0.21
SMC4-209ENST00000468653 FAM169BQ8N8A8 192 aa16.33■□□□□ 0.21
SMC4-209ENST00000468653 MUCL1Q96DR8 90 aa16.33■□□□□ 0.21
SMC4-209ENST00000468653 TMEM59Q9BXS4 323 aa16.33■□□□□ 0.21
SMC4-209ENST00000468653 CST11Q9H112 138 aa16.33■□□□□ 0.21
SMC4-209ENST00000468653 BANF2Q9H503 90 aa16.33■□□□□ 0.21
SMC4-209ENST00000468653 MYO7BQ6PIF6 2116 aa16.33■□□□□ 0.2
SMC4-209ENST00000468653 TRGV8A0A0C4DH27 118 aa16.33■□□□□ 0.2
SMC4-209ENST00000468653 ANKRD30BLA7E2S9 258 aa16.33■□□□□ 0.2
SMC4-209ENST00000468653 ORC5O43913 435 aa16.33■□□□□ 0.2
SMC4-209ENST00000468653 CDC14BO60729 498 aa16.33■□□□□ 0.2
SMC4-209ENST00000468653 SCGNO76038 276 aa16.33■□□□□ 0.2
SMC4-209ENST00000468653 FAM189A2Q15884 450 aa16.33■□□□□ 0.2
SMC4-209ENST00000468653 TMEM211Q6ICI0 200 aa16.33■□□□□ 0.2
SMC4-209ENST00000468653 ALKBH2Q6NS38 261 aa16.33■□□□□ 0.2
SMC4-209ENST00000468653 KDF1Q8NAX2 398 aaPredicted RBP16.33■□□□□ 0.2
SMC4-209ENST00000468653 BHLHE23Q8NDY6 225 aa16.33■□□□□ 0.2
SMC4-209ENST00000468653 TMEM104Q8NE00 496 aa16.33■□□□□ 0.2
SMC4-209ENST00000468653 STEAP2Q8NFT2 490 aa16.33■□□□□ 0.2
SMC4-209ENST00000468653 OR1J1Q8NGS3 322 aa16.33■□□□□ 0.2
SMC4-209ENST00000468653 ENKURQ8TC29 256 aa16.33■□□□□ 0.2
SMC4-209ENST00000468653 IGKV1-27A0A075B6S5 117 aa16.32■□□□□ 0.2
SMC4-209ENST00000468653 PRSS3P35030 304 aa16.32■□□□□ 0.2
SMC4-209ENST00000468653 ZP1P60852 638 aa16.32■□□□□ 0.2
SMC4-209ENST00000468653 FAM27E3Q08E93 113 aa16.32■□□□□ 0.2
SMC4-209ENST00000468653 LY6DQ14210 128 aa16.32■□□□□ 0.2
SMC4-209ENST00000468653 MOGAT2Q3SYC2 334 aa16.32■□□□□ 0.2
SMC4-209ENST00000468653 OR2T2Q6IF00 324 aa16.32■□□□□ 0.2
SMC4-209ENST00000468653 FBXW12Q6X9E4 464 aa16.32■□□□□ 0.2
SMC4-209ENST00000468653 ZDHHC23Q8IYP9 409 aa16.32■□□□□ 0.2
SMC4-209ENST00000468653 CHST4Q8NCG5 386 aa16.32■□□□□ 0.2
SMC4-209ENST00000468653 RND1Q92730 232 aa16.32■□□□□ 0.2
SMC4-209ENST00000468653 CMBLQ96DG6 245 aa16.32■□□□□ 0.2
SMC4-209ENST00000468653 NEDD4LQ96PU5 975 aa16.32■□□□□ 0.2
SMC4-209ENST00000468653 HIST1H2AAQ96QV6 131 aa16.32■□□□□ 0.2
SMC4-209ENST00000468653 VKORC1Q9BQB6 163 aa16.32■□□□□ 0.2
SMC4-209ENST00000468653 URM1Q9BTM9 101 aaKnown RBP16.32■□□□□ 0.2
SMC4-209ENST00000468653 OR2J1Q9GZK6 312 aa16.32■□□□□ 0.2
SMC4-209ENST00000468653 ACTR6Q9GZN1 396 aa16.32■□□□□ 0.2
SMC4-209ENST00000468653 RBFOX1Q9NWB1 397 aaKnown RBP16.32■□□□□ 0.2
SMC4-209ENST00000468653 KLK11Q9UBX7 282 aa16.32■□□□□ 0.2
SMC4-209ENST00000468653 SPTA1P02549 2419 aa16.32■□□□□ 0.2
SMC4-209ENST00000468653 IGHV1-18A0A0C4DH31 117 aa16.31■□□□□ 0.2
SMC4-209ENST00000468653 MEIOCA2RUB1 952 aa16.31■□□□□ 0.2
SMC4-209ENST00000468653 PLATP00750 562 aa16.31■□□□□ 0.2
SMC4-209ENST00000468653 ZNF35P13682 527 aa16.31■□□□□ 0.2
SMC4-209ENST00000468653 SERPINA2P20848 420 aa16.31■□□□□ 0.2
SMC4-209ENST00000468653 RAD52P43351 418 aa16.31■□□□□ 0.2
SMC4-209ENST00000468653 VEGFCP49767 419 aa16.31■□□□□ 0.2
SMC4-209ENST00000468653 ST6GALNAC3Q8NDV1 305 aa16.31■□□□□ 0.2
SMC4-209ENST00000468653 OR10K1Q8NGX5 313 aa16.31■□□□□ 0.2
SMC4-209ENST00000468653 ITPKCQ96DU7 683 aa16.31■□□□□ 0.2
SMC4-209ENST00000468653 METTL9Q9H1A3 318 aa16.31■□□□□ 0.2
SMC4-209ENST00000468653 LPAR5Q9H1C0 372 aa16.31■□□□□ 0.2
SMC4-209ENST00000468653 ELOVL5Q9NYP7 299 aa16.31■□□□□ 0.2
SMC4-209ENST00000468653 CRIM1Q9NZV1 1036 aa16.31■□□□□ 0.2
SMC4-209ENST00000468653 CACNG2Q9Y698 323 aa16.31■□□□□ 0.2
SMC4-209ENST00000468653 A0A1W2PP11 408 aa16.31■□□□□ 0.2
SMC4-209ENST00000468653 CENPXA8MT69 81 aa16.31■□□□□ 0.2
SMC4-209ENST00000468653 RAB27BO00194 218 aa16.31■□□□□ 0.2
SMC4-209ENST00000468653 SPRY1O43609 319 aaPredicted RBP16.31■□□□□ 0.2
SMC4-209ENST00000468653 ECDO95905 644 aaPredicted RBP16.31■□□□□ 0.2
SMC4-209ENST00000468653 CHRM2P08172 466 aa16.31■□□□□ 0.2
SMC4-209ENST00000468653 GSTT2BP0CG30 244 aa16.31■□□□□ 0.2
SMC4-209ENST00000468653 ZNF83P51522 516 aa16.31■□□□□ 0.2
SMC4-209ENST00000468653 AP3S2P59780 193 aa16.31■□□□□ 0.2
SMC4-209ENST00000468653 ERVS71-1P61550 626 aa16.31■□□□□ 0.2
SMC4-209ENST00000468653 GPR176Q14439 515 aa16.31■□□□□ 0.2
SMC4-209ENST00000468653 PPA1Q15181 289 aa16.31■□□□□ 0.2
SMC4-209ENST00000468653 LIX1LQ8IVB5 337 aa16.31■□□□□ 0.2
SMC4-209ENST00000468653 SLC25A40Q8TBP6 338 aa16.31■□□□□ 0.2
SMC4-209ENST00000468653 BSNQ9UPA5 3926 aa16.3■□□□□ 0.2
SMC4-209ENST00000468653 FAM240BA0A1B0GVZ2 78 aa16.3■□□□□ 0.2
SMC4-209ENST00000468653 ANGPTL7O43827 346 aa16.3■□□□□ 0.2
SMC4-209ENST00000468653 RBBP9O75884 186 aa16.3■□□□□ 0.2
SMC4-209ENST00000468653 RSU1Q15404 277 aa16.3■□□□□ 0.2
SMC4-209ENST00000468653 CEACAM21Q3KPI0 293 aa16.3■□□□□ 0.2
SMC4-209ENST00000468653 CDH24Q86UP0 819 aa16.3■□□□□ 0.2
SMC4-209ENST00000468653 RELL2Q8NC24 303 aaPredicted RBP16.3■□□□□ 0.2
SMC4-209ENST00000468653 OR51T1Q8NGJ9 327 aa16.3■□□□□ 0.2
SMC4-209ENST00000468653 OR10R2Q8NGX6 335 aa16.3■□□□□ 0.2
SMC4-209ENST00000468653 DMRTA2Q96SC8 542 aa16.3■□□□□ 0.2
SMC4-209ENST00000468653 NICN1Q9BSH3 213 aa16.3■□□□□ 0.2
SMC4-209ENST00000468653 ZMAT3Q9HA38 289 aaKnown RBP16.3■□□□□ 0.2
SMC4-209ENST00000468653 RBMX2Q9Y388 322 aaKnown RBP16.3■□□□□ 0.2
SMC4-209ENST00000468653 MPC1Q9Y5U8 109 aa16.3■□□□□ 0.2
SMC4-209ENST00000468653 IGHV2OR16-5A0A0B4J2B6 119 aa16.29■□□□□ 0.2
SMC4-209ENST00000468653 M0R1B8 84 aa16.29■□□□□ 0.2
SMC4-209ENST00000468653 RAC2P15153 192 aa16.29■□□□□ 0.2
SMC4-209ENST00000468653 MGMTP16455 207 aa16.29■□□□□ 0.2
SMC4-209ENST00000468653 KIR2DL3P43628 341 aa16.29■□□□□ 0.2
SMC4-209ENST00000468653 GUCA2AQ02747 115 aa16.29■□□□□ 0.2
SMC4-209ENST00000468653 KLF9Q13886 244 aaPredicted RBP16.29■□□□□ 0.2
SMC4-209ENST00000468653 DNM1P46Q6ZS02 220 aa16.29■□□□□ 0.2
SMC4-209ENST00000468653 RNF170Q96K19 258 aa16.29■□□□□ 0.2
SMC4-209ENST00000468653 MRPL15Q9P015 296 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms