RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 F5H0A9 414 aaPredicted RBP16.78■□□□□ 0.28
NPHP4-206ENST00000468253 CRLF1O75462 422 aa16.78■□□□□ 0.28
NPHP4-206ENST00000468253 ATP6V1G2O95670 118 aa16.78■□□□□ 0.28
NPHP4-206ENST00000468253 THBS2P35442 1172 aa16.78■□□□□ 0.28
NPHP4-206ENST00000468253 AQP4P55087 323 aa16.78■□□□□ 0.28
NPHP4-206ENST00000468253 NANOS3P60323 173 aaKnown RBP16.78■□□□□ 0.28
NPHP4-206ENST00000468253 CCDC58Q4VC31 144 aa16.78■□□□□ 0.28
NPHP4-206ENST00000468253 MOB3CQ70IA8 216 aa16.78■□□□□ 0.28
NPHP4-206ENST00000468253 ZNF771Q7L3S4 317 aaPredicted RBP16.78■□□□□ 0.28
NPHP4-206ENST00000468253 TMEM186Q96B77 213 aa16.78■□□□□ 0.28
NPHP4-206ENST00000468253 TMEM246Q9BRR3 403 aa16.78■□□□□ 0.28
NPHP4-206ENST00000468253 OR51I2Q9H344 312 aa16.78■□□□□ 0.28
NPHP4-206ENST00000468253 CHCHD3Q9NX63 227 aaKnown RBP16.78■□□□□ 0.28
NPHP4-206ENST00000468253 UBAP1Q9NZ09 502 aa16.78■□□□□ 0.28
NPHP4-206ENST00000468253 PSORS1C1Q9UIG5 152 aa16.78■□□□□ 0.28
NPHP4-206ENST00000468253 TRAV38-1A0A0B4J264 116 aa16.77■□□□□ 0.28
NPHP4-206ENST00000468253 CDIPTO14735 213 aa16.77■□□□□ 0.28
NPHP4-206ENST00000468253 TNFRSF13BO14836 293 aaPredicted RBP16.77■□□□□ 0.28
NPHP4-206ENST00000468253 PLPP2O43688 288 aa16.77■□□□□ 0.28
NPHP4-206ENST00000468253 FOXH1O75593 365 aa16.77■□□□□ 0.28
NPHP4-206ENST00000468253 SERPINA3P01011 423 aa16.77■□□□□ 0.28
NPHP4-206ENST00000468253 ZNF16P17020 682 aaPredicted RBP16.77■□□□□ 0.28
NPHP4-206ENST00000468253 MYL12AP19105 171 aa16.77■□□□□ 0.28
NPHP4-206ENST00000468253 HSPA13P48723 471 aa16.77■□□□□ 0.28
NPHP4-206ENST00000468253 ETV1P50549 477 aa16.77■□□□□ 0.28
NPHP4-206ENST00000468253 ST3GAL4Q11206 333 aa16.77■□□□□ 0.28
NPHP4-206ENST00000468253 HNRNPA0Q13151 305 aaKnown RBP16.77■□□□□ 0.28
NPHP4-206ENST00000468253 WDR82Q6UXN9 313 aa16.77■□□□□ 0.28
NPHP4-206ENST00000468253 ZNF826PQ6ZT77 177 aa16.77■□□□□ 0.28
NPHP4-206ENST00000468253 GLCCI1Q86VQ1 547 aa16.77■□□□□ 0.28
NPHP4-206ENST00000468253 RDH10Q8IZV5 341 aa16.77■□□□□ 0.28
NPHP4-206ENST00000468253 GCSAMQ8N6F7 178 aa16.77■□□□□ 0.28
NPHP4-206ENST00000468253 TECTBQ96PL2 329 aa16.77■□□□□ 0.28
NPHP4-206ENST00000468253 FGF23Q9GZV9 251 aaPredicted RBP16.77■□□□□ 0.28
NPHP4-206ENST00000468253 BABAM2Q9NXR7 383 aa16.77■□□□□ 0.28
NPHP4-206ENST00000468253 LPAR3Q9UBY5 353 aa16.77■□□□□ 0.28
NPHP4-206ENST00000468253 CDC42EP3Q9UKI2 254 aa16.77■□□□□ 0.28
NPHP4-206ENST00000468253 CEACAM18A8MTB9 384 aa16.76■□□□□ 0.27
NPHP4-206ENST00000468253 ZNF732B4DXR9 585 aa16.76■□□□□ 0.27
NPHP4-206ENST00000468253 ZNF205O95201 554 aa16.76■□□□□ 0.27
NPHP4-206ENST00000468253 CCDC159P0C7I6 412 aa16.76■□□□□ 0.27
NPHP4-206ENST00000468253 MUC1P15941 1255 aaPredicted RBP16.76■□□□□ 0.27
NPHP4-206ENST00000468253 GATA3P23771 443 aa16.76■□□□□ 0.27
NPHP4-206ENST00000468253 RBMXP38159 391 aaKnown RBP16.76■□□□□ 0.27
NPHP4-206ENST00000468253 GPM6AP51674 278 aa16.76■□□□□ 0.27
NPHP4-206ENST00000468253 ODF4Q2M2E3 257 aa16.76■□□□□ 0.27
NPHP4-206ENST00000468253 CEP78Q5JTW2 689 aa16.76■□□□□ 0.27
NPHP4-206ENST00000468253 FAM201AQ5SY85 155 aa16.76■□□□□ 0.27
NPHP4-206ENST00000468253 C6orf141Q5SZD1 244 aa16.76■□□□□ 0.27
NPHP4-206ENST00000468253 TEX36Q5VZQ5 186 aa16.76■□□□□ 0.27
NPHP4-206ENST00000468253 DCDC5Q6ZRR9 648 aa16.76■□□□□ 0.27
NPHP4-206ENST00000468253 KCTD8Q6ZWB6 473 aa16.76■□□□□ 0.27
NPHP4-206ENST00000468253 SCCPDHQ8NBX0 429 aa16.76■□□□□ 0.27
NPHP4-206ENST00000468253 ZNF671Q8TAW3 534 aa16.76■□□□□ 0.27
NPHP4-206ENST00000468253 PP6455Q8WZ26 134 aa16.76■□□□□ 0.27
NPHP4-206ENST00000468253 HIF1ANQ9NWT6 349 aa16.76■□□□□ 0.27
NPHP4-206ENST00000468253 HHLA2Q9UM44 414 aa16.76■□□□□ 0.27
NPHP4-206ENST00000468253 MALRD1Q5VYJ5 2156 aa16.75■□□□□ 0.27
NPHP4-206ENST00000468253 LOC107986453A0A1B0GWG9 222 aa16.75■□□□□ 0.27
NPHP4-206ENST00000468253 hCG_1807616A0A1W2PRN6 198 aa16.75■□□□□ 0.27
NPHP4-206ENST00000468253 OOEPA6NGQ2 149 aa16.75■□□□□ 0.27
NPHP4-206ENST00000468253 TMEM212A6NML5 194 aa16.75■□□□□ 0.27
NPHP4-206ENST00000468253 SRRM5B3KS81 715 aa16.75■□□□□ 0.27
NPHP4-206ENST00000468253 HOXB4P17483 251 aaPredicted RBP16.75■□□□□ 0.27
NPHP4-206ENST00000468253 RNLSQ5VYX0 342 aa16.75■□□□□ 0.27
NPHP4-206ENST00000468253 PLCXD3Q63HM9 321 aa16.75■□□□□ 0.27
NPHP4-206ENST00000468253 RPL22L1Q6P5R6 122 aaKnown RBP16.75■□□□□ 0.27
NPHP4-206ENST00000468253 ZNF573Q86YE8 665 aa16.75■□□□□ 0.27
NPHP4-206ENST00000468253 BPIFB6Q8NFQ5 453 aa16.75■□□□□ 0.27
NPHP4-206ENST00000468253 OR52N1Q8NH53 320 aa16.75■□□□□ 0.27
NPHP4-206ENST00000468253 LRRC29Q8WV35 223 aa16.75■□□□□ 0.27
NPHP4-206ENST00000468253 RPL3LQ92901 407 aaKnown RBP16.75■□□□□ 0.27
NPHP4-206ENST00000468253 C12orf43Q96C57 262 aaKnown RBP16.75■□□□□ 0.27
NPHP4-206ENST00000468253 NEIL1Q96FI4 390 aaPredicted RBP16.75■□□□□ 0.27
NPHP4-206ENST00000468253 FKBP14Q9NWM8 211 aa16.75■□□□□ 0.27
NPHP4-206ENST00000468253 SLC7A11Q9UPY5 501 aa16.75■□□□□ 0.27
NPHP4-206ENST00000468253 LRCH1Q9Y2L9 728 aa16.75■□□□□ 0.27
NPHP4-206ENST00000468253 NAV3Q8IVL0 2385 aa16.75■□□□□ 0.27
NPHP4-206ENST00000468253 TANC2Q9HCD6 1990 aa16.75■□□□□ 0.27
NPHP4-206ENST00000468253 JMJD1CQ15652 2540 aa16.74■□□□□ 0.27
NPHP4-206ENST00000468253 ANKRD61A6NGH8 418 aa16.74■□□□□ 0.27
NPHP4-206ENST00000468253 A8MXK9 166 aa16.74■□□□□ 0.27
NPHP4-206ENST00000468253 E9PI62 339 aa16.74■□□□□ 0.27
NPHP4-206ENST00000468253 GATBO75879 557 aaKnown RBP16.74■□□□□ 0.27
NPHP4-206ENST00000468253 ACAA1P09110 424 aaPredicted RBP16.74■□□□□ 0.27
NPHP4-206ENST00000468253 MYF6P23409 242 aa16.74■□□□□ 0.27
NPHP4-206ENST00000468253 MICBQ29980 383 aa16.74■□□□□ 0.27
NPHP4-206ENST00000468253 UTS2BQ765I0 119 aa16.74■□□□□ 0.27
NPHP4-206ENST00000468253 NLRC3Q7RTR2 1065 aa16.74■□□□□ 0.27
NPHP4-206ENST00000468253 ZNF676Q8N7Q3 588 aa16.74■□□□□ 0.27
NPHP4-206ENST00000468253 DEFB108BQ8NET1 73 aa16.74■□□□□ 0.27
NPHP4-206ENST00000468253 ANKRD60Q9BZ19 345 aa16.74■□□□□ 0.27
NPHP4-206ENST00000468253 CHST5Q9GZS9 411 aa16.74■□□□□ 0.27
NPHP4-206ENST00000468253 METTL17Q9H7H0 456 aaPredicted RBP16.74■□□□□ 0.27
NPHP4-206ENST00000468253 PLEKHA1Q9HB21 404 aa16.74■□□□□ 0.27
NPHP4-206ENST00000468253 TRBV2A0A0J9YWF9 115 aa16.73■□□□□ 0.27
NPHP4-206ENST00000468253 PQLC2LA1A4F0 135 aa16.73■□□□□ 0.27
NPHP4-206ENST00000468253 OGG1O15527 345 aa16.73■□□□□ 0.27
NPHP4-206ENST00000468253 XPNPEP2O43895 674 aa16.73■□□□□ 0.27
NPHP4-206ENST00000468253 ZFPL1O95159 310 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms