RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 BTN2A1Q7KYR7 527 aa15.81■□□□□ 0.12
COL7A1-207ENST00000467985 NRG4Q8WWG1 115 aa15.81■□□□□ 0.12
COL7A1-207ENST00000467985 ST8SIA4Q92187 359 aa15.81■□□□□ 0.12
COL7A1-207ENST00000467985 RNF170Q96K19 258 aa15.81■□□□□ 0.12
COL7A1-207ENST00000467985 DMRTB1Q96MA1 342 aa15.81■□□□□ 0.12
COL7A1-207ENST00000467985 C1orf147Q96MC9 270 aaPredicted RBP15.81■□□□□ 0.12
COL7A1-207ENST00000467985 RDH12Q96NR8 316 aa15.81■□□□□ 0.12
COL7A1-207ENST00000467985 WDFY2Q96P53 400 aa15.81■□□□□ 0.12
COL7A1-207ENST00000467985 OR8B4Q96RC9 309 aa15.81■□□□□ 0.12
COL7A1-207ENST00000467985 DNTTIP1Q9H147 329 aa15.81■□□□□ 0.12
COL7A1-207ENST00000467985 RASSF4Q9H2L5 321 aa15.81■□□□□ 0.12
COL7A1-207ENST00000467985 PRDM13Q9H4Q3 707 aa15.81■□□□□ 0.12
COL7A1-207ENST00000467985 PPP1R3EQ9H7J1 279 aa15.81■□□□□ 0.12
COL7A1-207ENST00000467985 DNAJB11Q9UBS4 358 aa15.81■□□□□ 0.12
COL7A1-207ENST00000467985 ZAR1LA6NP61 321 aa15.8■□□□□ 0.12
COL7A1-207ENST00000467985 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.8■□□□□ 0.12
COL7A1-207ENST00000467985 MMP9P14780 707 aa15.8■□□□□ 0.12
COL7A1-207ENST00000467985 VHLP40337 213 aa15.8■□□□□ 0.12
COL7A1-207ENST00000467985 RIDAP52758 137 aaKnown RBP15.8■□□□□ 0.12
COL7A1-207ENST00000467985 POU4F2Q12837 409 aa15.8■□□□□ 0.12
COL7A1-207ENST00000467985 WDR38Q5JTN6 314 aa15.8■□□□□ 0.12
COL7A1-207ENST00000467985 ATPAF1Q5TC12 328 aaPredicted RBP15.8■□□□□ 0.12
COL7A1-207ENST00000467985 ZBTB37Q5TC79 503 aa15.8■□□□□ 0.12
COL7A1-207ENST00000467985 BRD3OSQ6XYD6 125 aa15.8■□□□□ 0.12
COL7A1-207ENST00000467985 KCTD8Q6ZWB6 473 aa15.8■□□□□ 0.12
COL7A1-207ENST00000467985 TMEM163Q8TC26 289 aa15.8■□□□□ 0.12
COL7A1-207ENST00000467985 CYGBQ8WWM9 190 aa15.8■□□□□ 0.12
COL7A1-207ENST00000467985 DUX5Q96PT3 197 aa15.8■□□□□ 0.12
COL7A1-207ENST00000467985 CCL13Q99616 98 aa15.8■□□□□ 0.12
COL7A1-207ENST00000467985 PBOV1Q9GZY1 135 aa15.8■□□□□ 0.12
COL7A1-207ENST00000467985 NOX4Q9NPH5 578 aa15.8■□□□□ 0.12
COL7A1-207ENST00000467985 HAO2Q9NYQ3 351 aa15.8■□□□□ 0.12
COL7A1-207ENST00000467985 RPUSD1Q9UJJ7 312 aaKnown RBP15.8■□□□□ 0.12
COL7A1-207ENST00000467985 IKZF2Q9UKS7 526 aa15.8■□□□□ 0.12
COL7A1-207ENST00000467985 MGAM2Q2M2H8 2515 aa15.79■□□□□ 0.12
COL7A1-207ENST00000467985 NDUFB3O43676 98 aa15.79■□□□□ 0.12
COL7A1-207ENST00000467985 SFTPBP07988 381 aa15.79■□□□□ 0.12
COL7A1-207ENST00000467985 EFNB1P98172 346 aa15.79■□□□□ 0.12
COL7A1-207ENST00000467985 CEACAM21Q3KPI0 293 aa15.79■□□□□ 0.12
COL7A1-207ENST00000467985 AADACL4Q5VUY2 407 aa15.79■□□□□ 0.12
COL7A1-207ENST00000467985 C12orf73Q69YU5 71 aa15.79■□□□□ 0.12
COL7A1-207ENST00000467985 STUMQ69YW2 141 aa15.79■□□□□ 0.12
COL7A1-207ENST00000467985 THAP5Q7Z6K1 395 aa15.79■□□□□ 0.12
COL7A1-207ENST00000467985 COMMD2Q86X83 199 aa15.79■□□□□ 0.12
COL7A1-207ENST00000467985 GID4Q8IVV7 300 aa15.79■□□□□ 0.12
COL7A1-207ENST00000467985 TCEANCQ8N8B7 351 aa15.79■□□□□ 0.12
COL7A1-207ENST00000467985 SCCPDHQ8NBX0 429 aa15.79■□□□□ 0.12
COL7A1-207ENST00000467985 GATAD2BQ8WXI9 593 aa15.79■□□□□ 0.12
COL7A1-207ENST00000467985 RPL3LQ92901 407 aaKnown RBP15.79■□□□□ 0.12
COL7A1-207ENST00000467985 ZDHHC16Q969W1 377 aa15.79■□□□□ 0.12
COL7A1-207ENST00000467985 TBX15Q96SF7 602 aa15.79■□□□□ 0.12
COL7A1-207ENST00000467985 CNTD2Q9H8S5 307 aa15.79■□□□□ 0.12
COL7A1-207ENST00000467985 MOB1AQ9H8S9 216 aa15.79■□□□□ 0.12
COL7A1-207ENST00000467985 IMPAD1Q9NX62 359 aa15.79■□□□□ 0.12
COL7A1-207ENST00000467985 NUFIP1Q9UHK0 495 aaKnown RBP15.79■□□□□ 0.12
COL7A1-207ENST00000467985 NKX6-3A6NJ46 265 aa15.78■□□□□ 0.12
COL7A1-207ENST00000467985 PSMD9O00233 223 aa15.78■□□□□ 0.12
COL7A1-207ENST00000467985 MTRF1O75570 445 aaKnown RBP15.78■□□□□ 0.12
COL7A1-207ENST00000467985 GPM6AP51674 278 aa15.78■□□□□ 0.12
COL7A1-207ENST00000467985 CDC42P60953 191 aa15.78■□□□□ 0.12
COL7A1-207ENST00000467985 GNG3P63215 75 aa15.78■□□□□ 0.12
COL7A1-207ENST00000467985 RIPPLY1Q0D2K3 151 aa15.78■□□□□ 0.12
COL7A1-207ENST00000467985 DEFB112Q30KQ8 113 aa15.78■□□□□ 0.12
COL7A1-207ENST00000467985 LRRC10Q5BKY1 277 aa15.78■□□□□ 0.12
COL7A1-207ENST00000467985 ZNF322Q6U7Q0 402 aaPredicted RBP15.78■□□□□ 0.12
COL7A1-207ENST00000467985 IZUMO2Q6UXV1 221 aa15.78■□□□□ 0.12
COL7A1-207ENST00000467985 DHRSXQ8N5I4 330 aa15.78■□□□□ 0.12
COL7A1-207ENST00000467985 SGMS2Q8NHU3 365 aa15.78■□□□□ 0.12
COL7A1-207ENST00000467985 OR51E1Q8TCB6 317 aa15.78■□□□□ 0.12
COL7A1-207ENST00000467985 HPSE2Q8WWQ2 592 aa15.78■□□□□ 0.12
COL7A1-207ENST00000467985 MED30Q96HR3 178 aa15.78■□□□□ 0.12
COL7A1-207ENST00000467985 MBOAT4Q96T53 435 aa15.78■□□□□ 0.12
COL7A1-207ENST00000467985 SIRPDQ9H106 197 aa15.78■□□□□ 0.12
COL7A1-207ENST00000467985 GPR84Q9NQS5 396 aa15.78■□□□□ 0.12
COL7A1-207ENST00000467985 CLN6Q9NWW5 311 aa15.78■□□□□ 0.12
COL7A1-207ENST00000467985 COPS3Q9UNS2 423 aa15.78■□□□□ 0.12
COL7A1-207ENST00000467985 GMPPBQ9Y5P6 360 aa15.78■□□□□ 0.12
COL7A1-207ENST00000467985 KPTNQ9Y664 436 aa15.78■□□□□ 0.12
COL7A1-207ENST00000467985 CENPVL3A0A0U1RRI6 287 aa15.77■□□□□ 0.12
COL7A1-207ENST00000467985 OR5B21A6NL26 309 aa15.77■□□□□ 0.12
COL7A1-207ENST00000467985 FCN3O75636 299 aa15.77■□□□□ 0.12
COL7A1-207ENST00000467985 EPHA2P29317 976 aa15.77■□□□□ 0.12
COL7A1-207ENST00000467985 POLR2IP36954 125 aaKnown RBP15.77■□□□□ 0.12
COL7A1-207ENST00000467985 TGM4P49221 684 aa15.77■□□□□ 0.12
COL7A1-207ENST00000467985 AQP4P55087 323 aa15.77■□□□□ 0.12
COL7A1-207ENST00000467985 CXCR4P61073 352 aa15.77■□□□□ 0.12
COL7A1-207ENST00000467985 ARF6P62330 175 aa15.77■□□□□ 0.12
COL7A1-207ENST00000467985 EGR3Q06889 387 aa15.77■□□□□ 0.12
COL7A1-207ENST00000467985 CDONQ4KMG0 1287 aa15.77■□□□□ 0.12
COL7A1-207ENST00000467985 SLC35F2Q8IXU6 374 aa15.77■□□□□ 0.12
COL7A1-207ENST00000467985 CMTM4Q8IZR5 234 aa15.77■□□□□ 0.12
COL7A1-207ENST00000467985 FAM216BQ8N7L0 139 aa15.77■□□□□ 0.12
COL7A1-207ENST00000467985 OR5A2Q8NGI9 324 aa15.77■□□□□ 0.12
COL7A1-207ENST00000467985 FAM71F1Q96KD3 344 aaPredicted RBP15.77■□□□□ 0.12
COL7A1-207ENST00000467985 ADGRL4Q9HBW9 690 aa15.77■□□□□ 0.12
COL7A1-207ENST00000467985 ENPP5Q9UJA9 477 aa15.77■□□□□ 0.12
COL7A1-207ENST00000467985 SOX21Q9Y651 276 aaPredicted RBP15.77■□□□□ 0.12
COL7A1-207ENST00000467985 PRR32B1ATL7 298 aa15.76■□□□□ 0.11
COL7A1-207ENST00000467985 ZNF670-ZNF695F2Z2N8 137 aa15.76■□□□□ 0.11
COL7A1-207ENST00000467985 M0R129 80 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms