RNA–Protein interactions for RNA: ENST00000467112.5

RRP1-201, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 3,019 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-201ENST00000467112 A0A1W2PNV4 684 aa13.13□□□□□ -0.31
RRP1-201ENST00000467112 FIGNL2A6NMB9 653 aa13.13□□□□□ -0.31
RRP1-201ENST00000467112 STMND1H3BQB6 276 aa13.13□□□□□ -0.31
RRP1-201ENST00000467112 CST4P01036 141 aa13.13□□□□□ -0.31
RRP1-201ENST00000467112 IFNA4P05014 189 aa13.13□□□□□ -0.31
RRP1-201ENST00000467112 KLK2P20151 261 aa13.13□□□□□ -0.31
RRP1-201ENST00000467112 CPT2P23786 658 aa13.13□□□□□ -0.31
RRP1-201ENST00000467112 FCGR2CP31995 323 aa13.13□□□□□ -0.31
RRP1-201ENST00000467112 PPT1P50897 306 aa13.13□□□□□ -0.31
RRP1-201ENST00000467112 C14orf28Q4W4Y0 310 aa13.13□□□□□ -0.31
RRP1-201ENST00000467112 CRIP3Q6Q6R5 217 aa13.13□□□□□ -0.31
RRP1-201ENST00000467112 FAM89BQ8N5H3 189 aa13.13□□□□□ -0.31
RRP1-201ENST00000467112 SSC4DQ8WTU2 575 aa13.13□□□□□ -0.31
RRP1-201ENST00000467112 SMCO4Q9NRQ5 59 aa13.13□□□□□ -0.31
RRP1-201ENST00000467112 MEMO1Q9Y316 297 aa13.13□□□□□ -0.31
RRP1-201ENST00000467112 IFNA2P01563 188 aa13.13□□□□□ -0.31
RRP1-201ENST00000467112 RBMXP38159 391 aaKnown RBP13.13□□□□□ -0.31
RRP1-201ENST00000467112 TMEM33P57088 247 aa13.13□□□□□ -0.31
RRP1-201ENST00000467112 TGIF1Q15583 401 aa13.13□□□□□ -0.31
RRP1-201ENST00000467112 RHBDD1Q8TEB9 315 aa13.13□□□□□ -0.31
RRP1-201ENST00000467112 PECRQ9BY49 303 aa13.13□□□□□ -0.31
RRP1-201ENST00000467112 ELL3Q9HB65 397 aaPredicted RBP13.13□□□□□ -0.31
RRP1-201ENST00000467112 SLC2A4RGQ9NR83 387 aa13.13□□□□□ -0.31
RRP1-201ENST00000467112 CACFD1Q9UGQ2 172 aa13.13□□□□□ -0.31
RRP1-201ENST00000467112 C14orf166Q9Y224 244 aaKnown RBP13.13□□□□□ -0.31
RRP1-201ENST00000467112 LSM5Q9Y4Y9 91 aaKnown RBP13.13□□□□□ -0.31
RRP1-201ENST00000467112 TRAF3IP2O43734 574 aaPredicted RBP13.13□□□□□ -0.31
RRP1-201ENST00000467112 RAB5BP61020 215 aa13.13□□□□□ -0.31
RRP1-201ENST00000467112 RBMS3Q6XE24 437 aaKnown RBP13.13□□□□□ -0.31
RRP1-201ENST00000467112 DOK3Q7L591 496 aa13.13□□□□□ -0.31
RRP1-201ENST00000467112 DTX1Q86Y01 620 aa13.13□□□□□ -0.31
RRP1-201ENST00000467112 OR14K1Q8NGZ2 314 aa13.13□□□□□ -0.31
RRP1-201ENST00000467112 FBXO17Q96EF6 278 aa13.13□□□□□ -0.31
RRP1-201ENST00000467112 RPS10P5Q9NQ39 176 aa13.13□□□□□ -0.31
RRP1-201ENST00000467112 PARP11Q9NR21 331 aa13.13□□□□□ -0.31
RRP1-201ENST00000467112 EDARQ9UNE0 448 aa13.13□□□□□ -0.31
RRP1-201ENST00000467112 ADAMTS9Q9P2N4 1935 aa13.12□□□□□ -0.31
RRP1-201ENST00000467112 ASCC3Q8N3C0 2202 aaKnown RBP13.12□□□□□ -0.31
RRP1-201ENST00000467112 IGHV1OR21-1A0A087WYE8 117 aa13.12□□□□□ -0.31
RRP1-201ENST00000467112 QDPRP09417 244 aa13.12□□□□□ -0.31
RRP1-201ENST00000467112 ZNF41P51814 821 aaPredicted RBP13.12□□□□□ -0.31
RRP1-201ENST00000467112 DVL1P1P54792 670 aaPredicted RBP13.12□□□□□ -0.31
RRP1-201ENST00000467112 RSPO4Q2I0M5 234 aaPredicted RBP13.12□□□□□ -0.31
RRP1-201ENST00000467112 SEMA6DQ8NFY4 1073 aa13.12□□□□□ -0.31
RRP1-201ENST00000467112 NANPQ8TBE9 248 aa13.12□□□□□ -0.31
RRP1-201ENST00000467112 POC1BQ8TC44 478 aa13.12□□□□□ -0.31
RRP1-201ENST00000467112 STT3BQ8TCJ2 826 aa13.12□□□□□ -0.31
RRP1-201ENST00000467112 HDHD3Q9BSH5 251 aaPredicted RBP13.12□□□□□ -0.31
RRP1-201ENST00000467112 NAA11Q9BSU3 229 aaPredicted RBP13.12□□□□□ -0.31
RRP1-201ENST00000467112 RAB33BQ9H082 229 aa13.12□□□□□ -0.31
RRP1-201ENST00000467112 FANCFQ9NPI8 374 aa13.12□□□□□ -0.31
RRP1-201ENST00000467112 C1orf123Q9NWV4 160 aa13.12□□□□□ -0.31
RRP1-201ENST00000467112 ABCA7Q8IZY2 2146 aa13.12□□□□□ -0.31
RRP1-201ENST00000467112 A0A1W2PR77 199 aa13.12□□□□□ -0.31
RRP1-201ENST00000467112 DHRS7CA6NNS2 312 aa13.12□□□□□ -0.31
RRP1-201ENST00000467112 FOXI3A8MTJ6 420 aaPredicted RBP13.12□□□□□ -0.31
RRP1-201ENST00000467112 SCGB1D2O95969 90 aa13.12□□□□□ -0.31
RRP1-201ENST00000467112 CCL1P22362 96 aa13.12□□□□□ -0.31
RRP1-201ENST00000467112 HGFACQ04756 655 aa13.12□□□□□ -0.31
RRP1-201ENST00000467112 SMAD4Q13485 552 aaKnown RBP13.12□□□□□ -0.31
RRP1-201ENST00000467112 SLC16A13Q7RTY0 426 aa13.12□□□□□ -0.31
RRP1-201ENST00000467112 C6orf201Q7Z4U5 140 aa13.12□□□□□ -0.31
RRP1-201ENST00000467112 D2HGDHQ8N465 521 aa13.12□□□□□ -0.31
RRP1-201ENST00000467112 FNDC9Q8TBE3 224 aa13.12□□□□□ -0.31
RRP1-201ENST00000467112 LYZL4Q96KX0 146 aa13.12□□□□□ -0.31
RRP1-201ENST00000467112 OR5B2Q96R09 309 aa13.12□□□□□ -0.31
RRP1-201ENST00000467112 ZNF2Q9BSG1 426 aaPredicted RBP13.12□□□□□ -0.31
RRP1-201ENST00000467112 RNF122Q9H9V4 155 aa13.12□□□□□ -0.31
RRP1-201ENST00000467112 PPP4R1LQ9P1A2 415 aa13.12□□□□□ -0.31
RRP1-201ENST00000467112 MCTS1Q9ULC4 181 aaKnown RBP13.12□□□□□ -0.31
RRP1-201ENST00000467112 S100A12P80511 92 aa13.11□□□□□ -0.31
RRP1-201ENST00000467112 PLPPR5Q32ZL2 321 aa13.11□□□□□ -0.31
RRP1-201ENST00000467112 SLC25A47Q6Q0C1 308 aa13.11□□□□□ -0.31
RRP1-201ENST00000467112 PLPP5Q8NEB5 264 aa13.11□□□□□ -0.31
RRP1-201ENST00000467112 ERGIC1Q969X5 290 aa13.11□□□□□ -0.31
RRP1-201ENST00000467112 HIST1H2BAQ96A08 127 aa13.11□□□□□ -0.31
RRP1-201ENST00000467112 MRPL24Q96A35 216 aaKnown RBP13.11□□□□□ -0.31
RRP1-201ENST00000467112 SDHAF3Q9NRP4 125 aa13.11□□□□□ -0.31
RRP1-201ENST00000467112 FGF21Q9NSA1 209 aa13.11□□□□□ -0.31
RRP1-201ENST00000467112 PISDQ9UG56 409 aa13.11□□□□□ -0.31
RRP1-201ENST00000467112 AMDHD2Q9Y303 409 aa13.11□□□□□ -0.31
RRP1-201ENST00000467112 LMO7DNF2Z398 122 aa13.11□□□□□ -0.31
RRP1-201ENST00000467112 DEDDO75618 318 aa13.11□□□□□ -0.31
RRP1-201ENST00000467112 ZNF205O95201 554 aa13.11□□□□□ -0.31
RRP1-201ENST00000467112 HOXB1P14653 301 aaPredicted RBP13.11□□□□□ -0.31
RRP1-201ENST00000467112 ZNF44P15621 663 aa13.11□□□□□ -0.31
RRP1-201ENST00000467112 PTAFRP25105 342 aa13.11□□□□□ -0.31
RRP1-201ENST00000467112 SFTPDP35247 375 aa13.11□□□□□ -0.31
RRP1-201ENST00000467112 SUMO3P55854 103 aaPredicted RBP13.11□□□□□ -0.31
RRP1-201ENST00000467112 UBE2V2Q15819 145 aa13.11□□□□□ -0.31
RRP1-201ENST00000467112 FAM189A2Q15884 450 aa13.11□□□□□ -0.31
RRP1-201ENST00000467112 ISOC2Q96AB3 205 aa13.11□□□□□ -0.31
RRP1-201ENST00000467112 BSCL2Q96G97 398 aaPredicted RBP13.11□□□□□ -0.31
RRP1-201ENST00000467112 PGAM5Q96HS1 289 aa13.11□□□□□ -0.31
RRP1-201ENST00000467112 SHDQ96IW2 340 aa13.11□□□□□ -0.31
RRP1-201ENST00000467112 PRRX2Q99811 253 aa13.11□□□□□ -0.31
RRP1-201ENST00000467112 TIMM10BQ9Y5J6 103 aa13.11□□□□□ -0.31
RRP1-201ENST00000467112 IGHV1OR15-9A0A0B4J2B8 117 aa13.1□□□□□ -0.31
RRP1-201ENST00000467112 JTBO76095 146 aa13.1□□□□□ -0.31
RRP1-201ENST00000467112 FOLR2P14207 255 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms