RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 RNF166Q96A37 237 aaPredicted RBP9.68□□□□□ -0.86
UBR4-210ENST00000466969 OR5B12Q96R08 314 aa9.68□□□□□ -0.86
UBR4-210ENST00000466969 CLEC7AQ9BXN2 247 aa9.68□□□□□ -0.86
UBR4-210ENST00000466969 ZNF222Q9UK12 451 aa9.68□□□□□ -0.86
UBR4-210ENST00000466969 A0A087WUV0 522 aaPredicted RBP9.67□□□□□ -0.86
UBR4-210ENST00000466969 FGF16O43320 207 aa9.67□□□□□ -0.86
UBR4-210ENST00000466969 DDOSTP39656 456 aa9.67□□□□□ -0.86
UBR4-210ENST00000466969 MNDAP41218 407 aa9.67□□□□□ -0.86
UBR4-210ENST00000466969 NME5P56597 212 aa9.67□□□□□ -0.86
UBR4-210ENST00000466969 GNB1P62873 340 aa9.67□□□□□ -0.86
UBR4-210ENST00000466969 RUNX1Q01196 453 aa9.67□□□□□ -0.86
UBR4-210ENST00000466969 SNAI3Q3KNW1 292 aa9.67□□□□□ -0.86
UBR4-210ENST00000466969 CORO6Q6QEF8 472 aa9.67□□□□□ -0.86
UBR4-210ENST00000466969 LINC00322Q6ZN03 302 aaPredicted RBP9.67□□□□□ -0.86
UBR4-210ENST00000466969 ZNF676Q8N7Q3 588 aa9.67□□□□□ -0.86
UBR4-210ENST00000466969 OR4P4Q8NGL7 312 aa9.67□□□□□ -0.86
UBR4-210ENST00000466969 NFKBIDQ8NI38 313 aa9.67□□□□□ -0.86
UBR4-210ENST00000466969 PHLDA1Q8WV24 401 aaPredicted RBP9.67□□□□□ -0.86
UBR4-210ENST00000466969 RPL3LQ92901 407 aaKnown RBP9.67□□□□□ -0.86
UBR4-210ENST00000466969 PPP1R36Q96LQ0 422 aa9.67□□□□□ -0.86
UBR4-210ENST00000466969 MICU1Q9BPX6 476 aa9.67□□□□□ -0.86
UBR4-210ENST00000466969 RSRP1Q9BUV0 290 aa9.67□□□□□ -0.86
UBR4-210ENST00000466969 PAIP1Q9H074 479 aaKnown RBP9.67□□□□□ -0.86
UBR4-210ENST00000466969 OR51J1Q9H342 316 aa9.67□□□□□ -0.86
UBR4-210ENST00000466969 AKTIPQ9H8T0 292 aa9.67□□□□□ -0.86
UBR4-210ENST00000466969 STUB1Q9UNE7 303 aa9.67□□□□□ -0.86
UBR4-210ENST00000466969 COA3Q9Y2R0 106 aaPredicted RBP9.67□□□□□ -0.86
UBR4-210ENST00000466969 LRP1BQ9NZR2 4599 aa9.67□□□□□ -0.86
UBR4-210ENST00000466969 SHISA3A0PJX4 238 aa9.66□□□□□ -0.86
UBR4-210ENST00000466969 LINC01548A6NM66 108 aa9.66□□□□□ -0.86
UBR4-210ENST00000466969 LEUTXA8MZ59 168 aa9.66□□□□□ -0.86
UBR4-210ENST00000466969 XKRYO14609 159 aa9.66□□□□□ -0.86
UBR4-210ENST00000466969 RRP9O43818 475 aaKnown RBP9.66□□□□□ -0.86
UBR4-210ENST00000466969 KHDRBS3O75525 346 aaKnown RBP9.66□□□□□ -0.86
UBR4-210ENST00000466969 SERPINB7O75635 380 aa9.66□□□□□ -0.86
UBR4-210ENST00000466969 OR5F1O95221 314 aa9.66□□□□□ -0.86
UBR4-210ENST00000466969 IGLV1-51P01701 117 aa9.66□□□□□ -0.86
UBR4-210ENST00000466969 SLURP1P55000 103 aa9.66□□□□□ -0.86
UBR4-210ENST00000466969 CBX1P83916 185 aa9.66□□□□□ -0.86
UBR4-210ENST00000466969 RGNQ15493 299 aa9.66□□□□□ -0.86
UBR4-210ENST00000466969 TIGD6Q17RP2 521 aa9.66□□□□□ -0.86
UBR4-210ENST00000466969 GLYATL3Q5SZD4 288 aa9.66□□□□□ -0.86
UBR4-210ENST00000466969 AGBL2Q5U5Z8 902 aa9.66□□□□□ -0.86
UBR4-210ENST00000466969 REEP3Q6NUK4 255 aa9.66□□□□□ -0.86
UBR4-210ENST00000466969 ZNF561Q8N587 486 aa9.66□□□□□ -0.86
UBR4-210ENST00000466969 LIPHQ8WWY8 451 aa9.66□□□□□ -0.86
UBR4-210ENST00000466969 VPS33AQ96AX1 596 aa9.66□□□□□ -0.86
UBR4-210ENST00000466969 UBE2E2Q96LR5 201 aa9.66□□□□□ -0.86
UBR4-210ENST00000466969 ELOVL1Q9BW60 279 aa9.66□□□□□ -0.86
UBR4-210ENST00000466969 OPA3Q9H6K4 179 aa9.66□□□□□ -0.86
UBR4-210ENST00000466969 GNB4Q9HAV0 340 aa9.66□□□□□ -0.86
UBR4-210ENST00000466969 VSIG4Q9Y279 399 aa9.66□□□□□ -0.86
UBR4-210ENST00000466969 LHFPL6Q9Y693 200 aa9.66□□□□□ -0.86
UBR4-210ENST00000466969 A0A0J9YWU9 116 aa9.65□□□□□ -0.86
UBR4-210ENST00000466969 MEX3AA1L020 520 aaKnown RBP9.65□□□□□ -0.86
UBR4-210ENST00000466969 M0R135 149 aa9.65□□□□□ -0.86
UBR4-210ENST00000466969 SLC16A7O60669 478 aa9.65□□□□□ -0.86
UBR4-210ENST00000466969 SERPINA1P01009 418 aa9.65□□□□□ -0.86
UBR4-210ENST00000466969 IGHG4P01861 327 aa9.65□□□□□ -0.86
UBR4-210ENST00000466969 ZCCHC18P0CG32 403 aa9.65□□□□□ -0.86
UBR4-210ENST00000466969 INAFM2P0DMQ5 153 aa9.65□□□□□ -0.86
UBR4-210ENST00000466969 SLC9A3P48764 834 aa9.65□□□□□ -0.86
UBR4-210ENST00000466969 HES1Q14469 280 aa9.65□□□□□ -0.86
UBR4-210ENST00000466969 RFX4Q33E94 735 aa9.65□□□□□ -0.86
UBR4-210ENST00000466969 SMARCD3Q6STE5 483 aa9.65□□□□□ -0.86
UBR4-210ENST00000466969 KCTD8Q6ZWB6 473 aa9.65□□□□□ -0.86
UBR4-210ENST00000466969 OR6T1Q8NGN1 323 aa9.65□□□□□ -0.86
UBR4-210ENST00000466969 ZNF799Q96GE5 643 aa9.65□□□□□ -0.86
UBR4-210ENST00000466969 LRGUKQ96M69 825 aa9.65□□□□□ -0.86
UBR4-210ENST00000466969 RTL8AQ9BWD3 113 aa9.65□□□□□ -0.86
UBR4-210ENST00000466969 TINAGL1Q9GZM7 467 aaPredicted RBP9.65□□□□□ -0.86
UBR4-210ENST00000466969 TMEM133Q9H2Q1 129 aa9.65□□□□□ -0.86
UBR4-210ENST00000466969 WDR55Q9H6Y2 383 aaPredicted RBP9.65□□□□□ -0.86
UBR4-210ENST00000466969 ING3Q9NXR8 418 aa9.65□□□□□ -0.86
UBR4-210ENST00000466969 SESN1Q9Y6P5 492 aa9.65□□□□□ -0.86
UBR4-210ENST00000466969 OR6C68A6NDL8 312 aa9.64□□□□□ -0.87
UBR4-210ENST00000466969 ANXA2P2A6NMY6 339 aa9.64□□□□□ -0.87
UBR4-210ENST00000466969 LINC01619G3V211 115 aa9.64□□□□□ -0.87
UBR4-210ENST00000466969 H0Y980 276 aa9.64□□□□□ -0.87
UBR4-210ENST00000466969 PSMD9O00233 223 aa9.64□□□□□ -0.87
UBR4-210ENST00000466969 RTL8CO15255 209 aa9.64□□□□□ -0.87
UBR4-210ENST00000466969 AHCYL1O43865 530 aa9.64□□□□□ -0.87
UBR4-210ENST00000466969 NDUFB8O95169 186 aa9.64□□□□□ -0.87
UBR4-210ENST00000466969 RBMY1CP0DJD4 496 aa9.64□□□□□ -0.87
UBR4-210ENST00000466969 VDAC1P21796 283 aa9.64□□□□□ -0.87
UBR4-210ENST00000466969 PSMB8P28062 276 aa9.64□□□□□ -0.87
UBR4-210ENST00000466969 CEACAM3P40198 252 aa9.64□□□□□ -0.87
UBR4-210ENST00000466969 CENPAP49450 140 aa9.64□□□□□ -0.87
UBR4-210ENST00000466969 SLC7A2P52569 658 aa9.64□□□□□ -0.87
UBR4-210ENST00000466969 UFM1P61960 85 aa9.64□□□□□ -0.87
UBR4-210ENST00000466969 EWSR1Q01844 656 aaKnown RBP eCLIP9.64□□□□□ -0.87
UBR4-210ENST00000466969 FADDQ13158 208 aa9.64□□□□□ -0.87
UBR4-210ENST00000466969 PCLAFQ15004 111 aa9.64□□□□□ -0.87
UBR4-210ENST00000466969 CCDC144NLQ6NUI1 221 aa9.64□□□□□ -0.87
UBR4-210ENST00000466969 PGM2L1Q6PCE3 622 aa9.64□□□□□ -0.87
UBR4-210ENST00000466969 ZNF596Q8TC21 504 aa9.64□□□□□ -0.87
UBR4-210ENST00000466969 TMEM255BQ8WV15 326 aa9.64□□□□□ -0.87
UBR4-210ENST00000466969 RGP1Q92546 391 aaPredicted RBP9.64□□□□□ -0.87
UBR4-210ENST00000466969 SPTSSAQ969W0 71 aa9.64□□□□□ -0.87
UBR4-210ENST00000466969 ZNF714Q96N38 554 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms