RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 LRRC30A6NM36 301 aa12.18□□□□□ -0.46
DNMT3A-208ENST00000466601 ZNF732B4DXR9 585 aa12.18□□□□□ -0.46
DNMT3A-208ENST00000466601 SMAD7O15105 426 aaKnown RBP12.18□□□□□ -0.46
DNMT3A-208ENST00000466601 PLPP2O43688 288 aa12.18□□□□□ -0.46
DNMT3A-208ENST00000466601 MRPS14O60783 128 aaKnown RBP12.18□□□□□ -0.46
DNMT3A-208ENST00000466601 GATBO75879 557 aaKnown RBP12.18□□□□□ -0.46
DNMT3A-208ENST00000466601 CYB5R3P00387 301 aaPredicted RBP12.18□□□□□ -0.46
DNMT3A-208ENST00000466601 IRF2P14316 349 aa12.18□□□□□ -0.46
DNMT3A-208ENST00000466601 CELP19835 753 aa12.18□□□□□ -0.46
DNMT3A-208ENST00000466601 USF1P22415 310 aaPredicted RBP12.18□□□□□ -0.46
DNMT3A-208ENST00000466601 MAP2K4P45985 399 aa12.18□□□□□ -0.46
DNMT3A-208ENST00000466601 GPM6AP51674 278 aa12.18□□□□□ -0.46
DNMT3A-208ENST00000466601 GNG3P63215 75 aa12.18□□□□□ -0.46
DNMT3A-208ENST00000466601 LOXL1Q08397 574 aaPredicted RBP12.18□□□□□ -0.46
DNMT3A-208ENST00000466601 UBE2V2Q15819 145 aa12.18□□□□□ -0.46
DNMT3A-208ENST00000466601 FAM76BQ5HYJ3 339 aa12.18□□□□□ -0.46
DNMT3A-208ENST00000466601 AVPI1Q5T686 147 aa12.18□□□□□ -0.46
DNMT3A-208ENST00000466601 C11orf53Q8IXP5 236 aa12.18□□□□□ -0.46
DNMT3A-208ENST00000466601 C1orf87Q8N0U7 546 aa12.18□□□□□ -0.46
DNMT3A-208ENST00000466601 GPR148Q8TDV2 347 aa12.18□□□□□ -0.46
DNMT3A-208ENST00000466601 TSEN15Q8WW01 171 aaKnown RBP12.18□□□□□ -0.46
DNMT3A-208ENST00000466601 RGP1Q92546 391 aaPredicted RBP12.18□□□□□ -0.46
DNMT3A-208ENST00000466601 GHSRQ92847 366 aa12.18□□□□□ -0.46
DNMT3A-208ENST00000466601 HPS1Q92902 700 aa12.18□□□□□ -0.46
DNMT3A-208ENST00000466601 PGLYRP3Q96LB9 341 aa12.18□□□□□ -0.46
DNMT3A-208ENST00000466601 CHST5Q9GZS9 411 aa12.18□□□□□ -0.46
DNMT3A-208ENST00000466601 C1orf123Q9NWV4 160 aa12.18□□□□□ -0.46
DNMT3A-208ENST00000466601 DHDHQ9UQ10 334 aa12.18□□□□□ -0.46
DNMT3A-208ENST00000466601 WIPI2Q9Y4P8 454 aa12.18□□□□□ -0.46
DNMT3A-208ENST00000466601 NPTNQ9Y639 398 aa12.18□□□□□ -0.46
DNMT3A-208ENST00000466601 OTOGQ6ZRI0 2925 aa12.18□□□□□ -0.46
DNMT3A-208ENST00000466601 TANC2Q9HCD6 1990 aa12.18□□□□□ -0.46
DNMT3A-208ENST00000466601 IGHV4-61A0A0C4DH41 118 aa12.17□□□□□ -0.46
DNMT3A-208ENST00000466601 CD1AP06126 327 aa12.17□□□□□ -0.46
DNMT3A-208ENST00000466601 SOX2P48431 317 aa12.17□□□□□ -0.46
DNMT3A-208ENST00000466601 TBCEQ15813 527 aaPredicted RBP12.17□□□□□ -0.46
DNMT3A-208ENST00000466601 ZNF826PQ6ZT77 177 aa12.17□□□□□ -0.46
DNMT3A-208ENST00000466601 MAPK1IP1LQ8NDC0 245 aa12.17□□□□□ -0.46
DNMT3A-208ENST00000466601 RPL3LQ92901 407 aaKnown RBP12.17□□□□□ -0.46
DNMT3A-208ENST00000466601 C18orf12Q96KH6 178 aa12.17□□□□□ -0.46
DNMT3A-208ENST00000466601 COX4I2Q96KJ9 171 aa12.17□□□□□ -0.46
DNMT3A-208ENST00000466601 TECTBQ96PL2 329 aa12.17□□□□□ -0.46
DNMT3A-208ENST00000466601 TLNRD1Q9H1K6 362 aa12.17□□□□□ -0.46
DNMT3A-208ENST00000466601 OR51I2Q9H344 312 aa12.17□□□□□ -0.46
DNMT3A-208ENST00000466601 RNF7Q9UBF6 113 aa12.17□□□□□ -0.46
DNMT3A-208ENST00000466601 SLC7A11Q9UPY5 501 aa12.17□□□□□ -0.46
DNMT3A-208ENST00000466601 hCG_1807616A0A1W2PRN6 198 aa12.16□□□□□ -0.46
DNMT3A-208ENST00000466601 LRP5LA4QPB2 252 aa12.16□□□□□ -0.46
DNMT3A-208ENST00000466601 CDIPTO14735 213 aa12.16□□□□□ -0.46
DNMT3A-208ENST00000466601 WNT9BO14905 357 aa12.16□□□□□ -0.46
DNMT3A-208ENST00000466601 ATF1P18846 271 aa12.16□□□□□ -0.46
DNMT3A-208ENST00000466601 CHN2P52757 468 aa12.16□□□□□ -0.46
DNMT3A-208ENST00000466601 YIF1BQ5BJH7 314 aa12.16□□□□□ -0.46
DNMT3A-208ENST00000466601 UTS2BQ765I0 119 aa12.16□□□□□ -0.46
DNMT3A-208ENST00000466601 SERPINA12Q8IW75 414 aa12.16□□□□□ -0.46
DNMT3A-208ENST00000466601 SVOPQ8N4V2 548 aa12.16□□□□□ -0.46
DNMT3A-208ENST00000466601 PARP16Q8N5Y8 322 aa12.16□□□□□ -0.46
DNMT3A-208ENST00000466601 SCCPDHQ8NBX0 429 aa12.16□□□□□ -0.46
DNMT3A-208ENST00000466601 OR13C5Q8NGS8 318 aa12.16□□□□□ -0.46
DNMT3A-208ENST00000466601 TRMT10AQ8TBZ6 339 aaKnown RBP12.16□□□□□ -0.46
DNMT3A-208ENST00000466601 NPRL2Q8WTW4 380 aa12.16□□□□□ -0.46
DNMT3A-208ENST00000466601 NARFLQ9H6Q4 476 aa12.16□□□□□ -0.46
DNMT3A-208ENST00000466601 ISYNA1Q9NPH2 558 aa12.16□□□□□ -0.46
DNMT3A-208ENST00000466601 ACOT13Q9NPJ3 140 aa12.16□□□□□ -0.46
DNMT3A-208ENST00000466601 IGKV1-9A0A0C4DH69 117 aa12.15□□□□□ -0.46
DNMT3A-208ENST00000466601 TRBV5-5A0A0J9YX44 114 aa12.15□□□□□ -0.46
DNMT3A-208ENST00000466601 FAM230AA0A1W2PPH8 454 aa12.15□□□□□ -0.46
DNMT3A-208ENST00000466601 PQLC2LA1A4F0 135 aa12.15□□□□□ -0.46
DNMT3A-208ENST00000466601 ISPDA4D126 451 aa12.15□□□□□ -0.46
DNMT3A-208ENST00000466601 IGHV2-70P01814 119 aa12.15□□□□□ -0.46
DNMT3A-208ENST00000466601 CD2P06729 351 aa12.15□□□□□ -0.46
DNMT3A-208ENST00000466601 INHBBP09529 407 aa12.15□□□□□ -0.46
DNMT3A-208ENST00000466601 OCM2P0CE71 109 aa12.15□□□□□ -0.46
DNMT3A-208ENST00000466601 HSMCR30P0CW71 290 aa12.15□□□□□ -0.46
DNMT3A-208ENST00000466601 FOSL1P15407 271 aa12.15□□□□□ -0.46
DNMT3A-208ENST00000466601 CFHR2P36980 270 aa12.15□□□□□ -0.46
DNMT3A-208ENST00000466601 FUT6P51993 359 aa12.15□□□□□ -0.46
DNMT3A-208ENST00000466601 RPS11P62280 158 aaKnown RBP eCLIP12.15□□□□□ -0.46
DNMT3A-208ENST00000466601 BTG1P62324 171 aa12.15□□□□□ -0.46
DNMT3A-208ENST00000466601 EMX1Q04741 257 aaPredicted RBP12.15□□□□□ -0.46
DNMT3A-208ENST00000466601 CNN3Q15417 329 aaKnown RBP12.15□□□□□ -0.46
DNMT3A-208ENST00000466601 KCTD21Q4G0X4 260 aa12.15□□□□□ -0.46
DNMT3A-208ENST00000466601 FAM201AQ5SY85 155 aa12.15□□□□□ -0.46
DNMT3A-208ENST00000466601 WDR82Q6UXN9 313 aa12.15□□□□□ -0.46
DNMT3A-208ENST00000466601 ZNF573Q86YE8 665 aa12.15□□□□□ -0.46
DNMT3A-208ENST00000466601 SPARTQ8N0X7 666 aa12.15□□□□□ -0.46
DNMT3A-208ENST00000466601 BOLLQ8N9W6 283 aaKnown RBP12.15□□□□□ -0.46
DNMT3A-208ENST00000466601 OR5D14Q8NGL3 314 aa12.15□□□□□ -0.46
DNMT3A-208ENST00000466601 CLDND2Q8NHS1 167 aa12.15□□□□□ -0.46
DNMT3A-208ENST00000466601 LRRC29Q8WV35 223 aa12.15□□□□□ -0.46
DNMT3A-208ENST00000466601 ZCCHC4Q9H5U6 513 aa12.15□□□□□ -0.46
DNMT3A-208ENST00000466601 METTL17Q9H7H0 456 aaPredicted RBP12.15□□□□□ -0.46
DNMT3A-208ENST00000466601 VPS13CQ709C8 3753 aa12.15□□□□□ -0.46
DNMT3A-208ENST00000466601 PPIAL4EA0A075B759 164 aa12.14□□□□□ -0.47
DNMT3A-208ENST00000466601 PPIAL4DF5H284 164 aa12.14□□□□□ -0.47
DNMT3A-208ENST00000466601 ZNF205O95201 554 aa12.14□□□□□ -0.47
DNMT3A-208ENST00000466601 LHBP01229 141 aa12.14□□□□□ -0.47
DNMT3A-208ENST00000466601 OCMP0CE72 109 aaPredicted RBP12.14□□□□□ -0.47
DNMT3A-208ENST00000466601 PPIAL4FP0DN26 164 aa12.14□□□□□ -0.47
DNMT3A-208ENST00000466601 PRKACBP22694 351 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms