RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 OSR2Q8N2R0 312 aa2.5□□□□□ -2.01
CDC42BPA-211ENST00000466538 ZNF645Q8N7E2 425 aa2.5□□□□□ -2.01
CDC42BPA-211ENST00000466538 SLC35G3Q8N808 338 aa2.5□□□□□ -2.01
CDC42BPA-211ENST00000466538 ASCC1Q8N9N2 400 aaKnown RBP2.5□□□□□ -2.01
CDC42BPA-211ENST00000466538 SFXN5Q8TD22 340 aa2.5□□□□□ -2.01
CDC42BPA-211ENST00000466538 RXFP2Q8WXD0 754 aa2.5□□□□□ -2.01
CDC42BPA-211ENST00000466538 C19orf60Q96EN9 201 aa2.5□□□□□ -2.01
CDC42BPA-211ENST00000466538 ALS2CR12Q96Q35 445 aa2.5□□□□□ -2.01
CDC42BPA-211ENST00000466538 GABRG3Q99928 467 aa2.5□□□□□ -2.01
CDC42BPA-211ENST00000466538 NUDT9Q9BW91 350 aa2.5□□□□□ -2.01
CDC42BPA-211ENST00000466538 ZNF717Q9BY31 904 aaPredicted RBP2.5□□□□□ -2.01
CDC42BPA-211ENST00000466538 NDRG2Q9UN36 371 aaKnown RBP2.5□□□□□ -2.01
CDC42BPA-211ENST00000466538 LRRC42Q9Y546 428 aa2.5□□□□□ -2.01
CDC42BPA-211ENST00000466538 NPHP4O75161 1426 aaPredicted RBP2.5□□□□□ -2.01
CDC42BPA-211ENST00000466538 TRAV8-4A0A0B4J246 113 aa2.49□□□□□ -2.01
CDC42BPA-211ENST00000466538 E7EWF7 191 aa2.49□□□□□ -2.01
CDC42BPA-211ENST00000466538 RPL36A-HNRNPH2H7BZ11 118 aa2.49□□□□□ -2.01
CDC42BPA-211ENST00000466538 NDUFS8O00217 210 aa2.49□□□□□ -2.01
CDC42BPA-211ENST00000466538 CCDC22O60826 627 aa2.49□□□□□ -2.01
CDC42BPA-211ENST00000466538 PTTG1O95997 202 aa2.49□□□□□ -2.01
CDC42BPA-211ENST00000466538 IGLV2-8P01709 118 aa2.49□□□□□ -2.01
CDC42BPA-211ENST00000466538 P01737 135 aa2.49□□□□□ -2.01
CDC42BPA-211ENST00000466538 IVLP07476 585 aa2.49□□□□□ -2.01
CDC42BPA-211ENST00000466538 OR5AL1P0C617 328 aa2.49□□□□□ -2.01
CDC42BPA-211ENST00000466538 GNRHRP30968 328 aa2.49□□□□□ -2.01
CDC42BPA-211ENST00000466538 ARR3P36575 388 aa2.49□□□□□ -2.01
CDC42BPA-211ENST00000466538 NUP62P37198 522 aaPredicted RBP2.49□□□□□ -2.01
CDC42BPA-211ENST00000466538 TRDNQ13061 729 aa2.49□□□□□ -2.01
CDC42BPA-211ENST00000466538 HSP90B2PQ58FF3 399 aa2.49□□□□□ -2.01
CDC42BPA-211ENST00000466538 FBXO48Q5FWF7 155 aa2.49□□□□□ -2.01
CDC42BPA-211ENST00000466538 DUPD1Q68J44 220 aa2.49□□□□□ -2.01
CDC42BPA-211ENST00000466538 SLC25A25Q6KCM7 469 aa2.49□□□□□ -2.01
CDC42BPA-211ENST00000466538 RNF10Q8N5U6 811 aaKnown RBP2.49□□□□□ -2.01
CDC42BPA-211ENST00000466538 SPERTQ8NA61 448 aa2.49□□□□□ -2.01
CDC42BPA-211ENST00000466538 APCDD1LQ8NCL9 501 aa2.49□□□□□ -2.01
CDC42BPA-211ENST00000466538 OR4M2Q8NGB6 313 aa2.49□□□□□ -2.01
CDC42BPA-211ENST00000466538 OR6N2Q8NGY6 317 aa2.49□□□□□ -2.01
CDC42BPA-211ENST00000466538 OR8K3Q8NH51 312 aa2.49□□□□□ -2.01
CDC42BPA-211ENST00000466538 RNF170Q96K19 258 aa2.49□□□□□ -2.01
CDC42BPA-211ENST00000466538 STMN4Q9H169 189 aaPredicted RBP2.49□□□□□ -2.01
CDC42BPA-211ENST00000466538 PLEKHF2Q9H8W4 249 aa2.49□□□□□ -2.01
CDC42BPA-211ENST00000466538 FBXO6Q9NRD1 293 aaPredicted RBP2.49□□□□□ -2.01
CDC42BPA-211ENST00000466538 VAX2Q9UIW0 290 aa2.49□□□□□ -2.01
CDC42BPA-211ENST00000466538 SLC7A11Q9UPY5 501 aa2.49□□□□□ -2.01
CDC42BPA-211ENST00000466538 FARSAQ9Y285 508 aaKnown RBP2.49□□□□□ -2.01
CDC42BPA-211ENST00000466538 KLF12Q9Y4X4 402 aa2.49□□□□□ -2.01
CDC42BPA-211ENST00000466538 COL27A1Q8IZC6 1860 aaPredicted RBP2.49□□□□□ -2.01
CDC42BPA-211ENST00000466538 TUBGCP6Q96RT7 1819 aa2.49□□□□□ -2.01
CDC42BPA-211ENST00000466538 CCL15-CCL14A0A0B4J2E2 113 aa2.48□□□□□ -2.01
CDC42BPA-211ENST00000466538 SPRR5A0A1B0GTR4 108 aa2.48□□□□□ -2.01
CDC42BPA-211ENST00000466538 ISPDA4D126 451 aa2.48□□□□□ -2.01
CDC42BPA-211ENST00000466538 SMC2O95347 1197 aa2.48□□□□□ -2.01
CDC42BPA-211ENST00000466538 RPN2P04844 631 aa2.48□□□□□ -2.01
CDC42BPA-211ENST00000466538 S100A9P06702 114 aaKnown RBP2.48□□□□□ -2.01
CDC42BPA-211ENST00000466538 RHOCP08134 193 aa2.48□□□□□ -2.01
CDC42BPA-211ENST00000466538 PRKACBP22694 351 aa2.48□□□□□ -2.01
CDC42BPA-211ENST00000466538 PRSS3P35030 304 aa2.48□□□□□ -2.01
CDC42BPA-211ENST00000466538 PPP1CAP62136 330 aa2.48□□□□□ -2.01
CDC42BPA-211ENST00000466538 RPL31P62899 125 aaKnown RBP2.48□□□□□ -2.01
CDC42BPA-211ENST00000466538 CCL15Q16663 113 aa2.48□□□□□ -2.01
CDC42BPA-211ENST00000466538 HHATQ5VTY9 493 aa2.48□□□□□ -2.01
CDC42BPA-211ENST00000466538 KDM4DQ6B0I6 523 aa2.48□□□□□ -2.01
CDC42BPA-211ENST00000466538 IGFL1Q6UW32 110 aa2.48□□□□□ -2.01
CDC42BPA-211ENST00000466538 RNF182Q8N6D2 247 aa2.48□□□□□ -2.01
CDC42BPA-211ENST00000466538 OR4A15Q8NGL6 344 aa2.48□□□□□ -2.01
CDC42BPA-211ENST00000466538 OR5M1Q8NGP8 315 aa2.48□□□□□ -2.01
CDC42BPA-211ENST00000466538 OR51A7Q8NH64 312 aa2.48□□□□□ -2.01
CDC42BPA-211ENST00000466538 Q96MT0 163 aa2.48□□□□□ -2.01
CDC42BPA-211ENST00000466538 CDX2Q99626 313 aaPredicted RBP2.48□□□□□ -2.01
CDC42BPA-211ENST00000466538 RHOXF2Q9BQY4 288 aa2.48□□□□□ -2.01
CDC42BPA-211ENST00000466538 CHID1Q9BWS9 393 aa2.48□□□□□ -2.01
CDC42BPA-211ENST00000466538 ZSCAN16Q9H4T2 348 aaPredicted RBP2.48□□□□□ -2.01
CDC42BPA-211ENST00000466538 XKR8Q9H6D3 395 aa2.48□□□□□ -2.01
CDC42BPA-211ENST00000466538 TFR2Q9UP52 801 aa2.48□□□□□ -2.01
CDC42BPA-211ENST00000466538 NUP214P35658 2090 aaPredicted RBP2.48□□□□□ -2.01
CDC42BPA-211ENST00000466538 TRAV8-6A0A0B4J262 113 aa2.47□□□□□ -2.01
CDC42BPA-211ENST00000466538 A8MWL6 223 aa2.47□□□□□ -2.01
CDC42BPA-211ENST00000466538 SEC14L6B5MCN3 397 aa2.47□□□□□ -2.01
CDC42BPA-211ENST00000466538 ALOX12BO75342 701 aa2.47□□□□□ -2.01
CDC42BPA-211ENST00000466538 NPPAP01160 153 aa2.47□□□□□ -2.01
CDC42BPA-211ENST00000466538 HTR2CP28335 458 aa2.47□□□□□ -2.01
CDC42BPA-211ENST00000466538 MLF1P58340 268 aa2.47□□□□□ -2.01
CDC42BPA-211ENST00000466538 FUT5Q11128 374 aa2.47□□□□□ -2.01
CDC42BPA-211ENST00000466538 SHHQ15465 462 aa2.47□□□□□ -2.01
CDC42BPA-211ENST00000466538 FBXL19-AS1Q494R0 122 aa2.47□□□□□ -2.01
CDC42BPA-211ENST00000466538 FAM27D1Q5T7N8 215 aa2.47□□□□□ -2.01
CDC42BPA-211ENST00000466538 ZNF561Q8N587 486 aa2.47□□□□□ -2.01
CDC42BPA-211ENST00000466538 TMEM105Q8N8V8 129 aa2.47□□□□□ -2.01
CDC42BPA-211ENST00000466538 ST20-AS1Q8NBB2 130 aa2.47□□□□□ -2.01
CDC42BPA-211ENST00000466538 ING5Q8WYH8 240 aa2.47□□□□□ -2.01
CDC42BPA-211ENST00000466538 TMEM159Q96B96 161 aa2.47□□□□□ -2.01
CDC42BPA-211ENST00000466538 IP6K3Q96PC2 410 aa2.47□□□□□ -2.01
CDC42BPA-211ENST00000466538 MAP1LC3CQ9BXW4 147 aa2.47□□□□□ -2.01
CDC42BPA-211ENST00000466538 SYT4Q9H2B2 425 aa2.47□□□□□ -2.01
CDC42BPA-211ENST00000466538 WDR55Q9H6Y2 383 aaPredicted RBP2.47□□□□□ -2.01
CDC42BPA-211ENST00000466538 CSNK1G1Q9HCP0 422 aa2.47□□□□□ -2.01
CDC42BPA-211ENST00000466538 VCX3AQ9NNX9 186 aa2.47□□□□□ -2.01
CDC42BPA-211ENST00000466538 ACOT9Q9Y305 439 aa2.47□□□□□ -2.01
CDC42BPA-211ENST00000466538 V9GYY9 64 aa2.47□□□□□ -2.01
CDC42BPA-211ENST00000466538 MAP3K19Q56UN5 1328 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms