RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 CD28P10747 220 aa12.05□□□□□ -0.48
HMGXB4-206ENST00000466438 NR2C1P13056 603 aa12.05□□□□□ -0.48
HMGXB4-206ENST00000466438 TUBG1P23258 451 aa12.05□□□□□ -0.48
HMGXB4-206ENST00000466438 SLC15A1P46059 708 aa12.05□□□□□ -0.48
HMGXB4-206ENST00000466438 SLC25A1P53007 311 aa12.05□□□□□ -0.48
HMGXB4-206ENST00000466438 ARF6P62330 175 aa12.05□□□□□ -0.48
HMGXB4-206ENST00000466438 MRPS34P82930 218 aaKnown RBP12.05□□□□□ -0.48
HMGXB4-206ENST00000466438 EGFEM1PQ0D2K5 195 aa12.05□□□□□ -0.48
HMGXB4-206ENST00000466438 HIST3H3Q16695 136 aa12.05□□□□□ -0.48
HMGXB4-206ENST00000466438 KLHL12Q53G59 568 aa12.05□□□□□ -0.48
HMGXB4-206ENST00000466438 MEPCEQ7L2J0 689 aaKnown RBP12.05□□□□□ -0.48
HMGXB4-206ENST00000466438 FCGR1BQ92637 280 aa12.05□□□□□ -0.48
HMGXB4-206ENST00000466438 RNFT2Q96EX2 444 aa12.05□□□□□ -0.48
HMGXB4-206ENST00000466438 TMEM80Q96HE8 168 aa12.05□□□□□ -0.48
HMGXB4-206ENST00000466438 AMBNQ9NP70 447 aa12.05□□□□□ -0.48
HMGXB4-206ENST00000466438 TUBG2Q9NRH3 451 aa12.05□□□□□ -0.48
HMGXB4-206ENST00000466438 PAK1IP1Q9NWT1 392 aaPredicted RBP12.05□□□□□ -0.48
HMGXB4-206ENST00000466438 ERVK-18Q9QC07 812 aa12.05□□□□□ -0.48
HMGXB4-206ENST00000466438 FAM183AA6NL82 134 aa12.04□□□□□ -0.48
HMGXB4-206ENST00000466438 AHCYL1O43865 530 aa12.04□□□□□ -0.48
HMGXB4-206ENST00000466438 MYL12AP19105 171 aa12.04□□□□□ -0.48
HMGXB4-206ENST00000466438 DCKP27707 260 aa12.04□□□□□ -0.48
HMGXB4-206ENST00000466438 ATP6V1E1P36543 226 aa12.04□□□□□ -0.48
HMGXB4-206ENST00000466438 CENPAP49450 140 aa12.04□□□□□ -0.48
HMGXB4-206ENST00000466438 SRP9P49458 86 aaKnown RBP12.04□□□□□ -0.48
HMGXB4-206ENST00000466438 CLRN1P58418 232 aa12.04□□□□□ -0.48
HMGXB4-206ENST00000466438 ST3GAL4Q11206 333 aa12.04□□□□□ -0.48
HMGXB4-206ENST00000466438 TBCEQ15813 527 aaPredicted RBP12.04□□□□□ -0.48
HMGXB4-206ENST00000466438 MESTQ5EB52 335 aa12.04□□□□□ -0.48
HMGXB4-206ENST00000466438 DNM1P34Q6PK57 102 aa12.04□□□□□ -0.48
HMGXB4-206ENST00000466438 KCTD8Q6ZWB6 473 aa12.04□□□□□ -0.48
HMGXB4-206ENST00000466438 BCDIN3DQ7Z5W3 292 aaKnown RBP12.04□□□□□ -0.48
HMGXB4-206ENST00000466438 MOGAT3Q86VF5 341 aa12.04□□□□□ -0.48
HMGXB4-206ENST00000466438 ALDH16A1Q8IZ83 802 aa12.04□□□□□ -0.48
HMGXB4-206ENST00000466438 SPARTQ8N0X7 666 aa12.04□□□□□ -0.48
HMGXB4-206ENST00000466438 DTX3Q8N9I9 347 aa12.04□□□□□ -0.48
HMGXB4-206ENST00000466438 CYB561A3Q8NBI2 242 aa12.04□□□□□ -0.48
HMGXB4-206ENST00000466438 OR10AD1Q8NGE0 317 aa12.04□□□□□ -0.48
HMGXB4-206ENST00000466438 OR2T4Q8NH00 348 aa12.04□□□□□ -0.48
HMGXB4-206ENST00000466438 ASB10Q8WXI3 467 aa12.04□□□□□ -0.48
HMGXB4-206ENST00000466438 RCC1LQ96I51 464 aaKnown RBP12.04□□□□□ -0.48
HMGXB4-206ENST00000466438 NMNAT3Q96T66 252 aa12.04□□□□□ -0.48
HMGXB4-206ENST00000466438 CITED2Q99967 270 aaPredicted RBP12.04□□□□□ -0.48
HMGXB4-206ENST00000466438 OR51V1Q9H2C8 321 aa12.04□□□□□ -0.48
HMGXB4-206ENST00000466438 POFUT1Q9H488 388 aa12.04□□□□□ -0.48
HMGXB4-206ENST00000466438 MRPS18AQ9NVS2 196 aaKnown RBP12.04□□□□□ -0.48
HMGXB4-206ENST00000466438 CHCHD3Q9NX63 227 aaKnown RBP12.04□□□□□ -0.48
HMGXB4-206ENST00000466438 CTSZQ9UBR2 303 aa12.04□□□□□ -0.48
HMGXB4-206ENST00000466438 DUS4LO95620 317 aaKnown RBP12.03□□□□□ -0.48
HMGXB4-206ENST00000466438 ABHD16AO95870 558 aa12.03□□□□□ -0.48
HMGXB4-206ENST00000466438 PAHP00439 452 aa12.03□□□□□ -0.48
HMGXB4-206ENST00000466438 MT-ND2P03891 347 aa12.03□□□□□ -0.48
HMGXB4-206ENST00000466438 SLC2A5P22732 501 aa12.03□□□□□ -0.48
HMGXB4-206ENST00000466438 BLVRAP53004 296 aa12.03□□□□□ -0.48
HMGXB4-206ENST00000466438 DMRTC1Q5HYR2 192 aa12.03□□□□□ -0.48
HMGXB4-206ENST00000466438 C10orf128Q5T292 105 aa12.03□□□□□ -0.48
HMGXB4-206ENST00000466438 METAP1DQ6UB28 335 aaPredicted RBP12.03□□□□□ -0.48
HMGXB4-206ENST00000466438 RNF144BQ7Z419 303 aa12.03□□□□□ -0.48
HMGXB4-206ENST00000466438 VMO1Q7Z5L0 202 aa12.03□□□□□ -0.48
HMGXB4-206ENST00000466438 NOXO1Q8NFA2 376 aa12.03□□□□□ -0.48
HMGXB4-206ENST00000466438 BBS1Q8NFJ9 593 aa12.03□□□□□ -0.48
HMGXB4-206ENST00000466438 FNDC8Q8TC99 324 aa12.03□□□□□ -0.48
HMGXB4-206ENST00000466438 NABP1Q96AH0 204 aa12.03□□□□□ -0.48
HMGXB4-206ENST00000466438 HAVCR1Q96D42 359 aa12.03□□□□□ -0.48
HMGXB4-206ENST00000466438 CMBLQ96DG6 245 aa12.03□□□□□ -0.48
HMGXB4-206ENST00000466438 MYCBPQ99417 103 aaPredicted RBP12.03□□□□□ -0.48
HMGXB4-206ENST00000466438 OR2H1Q9GZK4 316 aa12.03□□□□□ -0.48
HMGXB4-206ENST00000466438 WNT5BQ9H1J7 359 aa12.03□□□□□ -0.48
HMGXB4-206ENST00000466438 RPRD1BQ9NQG5 326 aaKnown RBP12.03□□□□□ -0.48
HMGXB4-206ENST00000466438 TBCCD1Q9NVR7 557 aa12.03□□□□□ -0.48
HMGXB4-206ENST00000466438 HAO2Q9NYQ3 351 aa12.03□□□□□ -0.48
HMGXB4-206ENST00000466438 DIMT1Q9UNQ2 313 aaKnown RBP12.03□□□□□ -0.48
HMGXB4-206ENST00000466438 ERGIC3Q9Y282 383 aa12.03□□□□□ -0.48
HMGXB4-206ENST00000466438 EXOSC1Q9Y3B2 195 aaKnown RBP12.03□□□□□ -0.48
HMGXB4-206ENST00000466438 MAB21L2Q9Y586 359 aa12.03□□□□□ -0.48
HMGXB4-206ENST00000466438 KPTNQ9Y664 436 aa12.03□□□□□ -0.48
HMGXB4-206ENST00000466438 A0A1B0GVI7 797 aa12.02□□□□□ -0.49
HMGXB4-206ENST00000466438 PRSS37A4D1T9 235 aa12.02□□□□□ -0.49
HMGXB4-206ENST00000466438 CENPBD1B2RD01 187 aa12.02□□□□□ -0.49
HMGXB4-206ENST00000466438 MYL12BO14950 172 aa12.02□□□□□ -0.49
HMGXB4-206ENST00000466438 HTR1AP08908 422 aa12.02□□□□□ -0.49
HMGXB4-206ENST00000466438 IRF2P14316 349 aa12.02□□□□□ -0.49
HMGXB4-206ENST00000466438 SPI1P17947 270 aa12.02□□□□□ -0.49
HMGXB4-206ENST00000466438 CRABP1P29762 137 aa12.02□□□□□ -0.49
HMGXB4-206ENST00000466438 CDAP32320 146 aa12.02□□□□□ -0.49
HMGXB4-206ENST00000466438 CDKN2AP42771 156 aaKnown RBP12.02□□□□□ -0.49
HMGXB4-206ENST00000466438 ZNF133P52736 654 aaPredicted RBP12.02□□□□□ -0.49
HMGXB4-206ENST00000466438 ACTC1P68032 377 aa12.02□□□□□ -0.49
HMGXB4-206ENST00000466438 ACTA1P68133 377 aa12.02□□□□□ -0.49
HMGXB4-206ENST00000466438 NEDD8Q15843 81 aa12.02□□□□□ -0.49
HMGXB4-206ENST00000466438 CDONQ4KMG0 1287 aa12.02□□□□□ -0.49
HMGXB4-206ENST00000466438 RNLSQ5VYX0 342 aa12.02□□□□□ -0.49
HMGXB4-206ENST00000466438 PROKR2Q8NFJ6 384 aa12.02□□□□□ -0.49
HMGXB4-206ENST00000466438 OR9Q1Q8NGQ5 310 aa12.02□□□□□ -0.49
HMGXB4-206ENST00000466438 RORBQ92753 470 aa12.02□□□□□ -0.49
HMGXB4-206ENST00000466438 PTP4A1Q93096 173 aa12.02□□□□□ -0.49
HMGXB4-206ENST00000466438 LGALS12Q96DT0 336 aa12.02□□□□□ -0.49
HMGXB4-206ENST00000466438 ALG12Q9BV10 488 aa12.02□□□□□ -0.49
HMGXB4-206ENST00000466438 MND1Q9BWT6 205 aa12.02□□□□□ -0.49
HMGXB4-206ENST00000466438 CDCA4Q9BXL8 241 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms