RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 MED30Q96HR3 178 aa17.12■□□□□ 0.33
CSPG5-204ENST00000465441 GAFA1Q96PS6 74 aa17.12■□□□□ 0.33
CSPG5-204ENST00000465441 HIST1H2AAQ96QV6 131 aa17.12■□□□□ 0.33
CSPG5-204ENST00000465441 C1orf21Q9H246 121 aa17.12■□□□□ 0.33
CSPG5-204ENST00000465441 NIPAL2Q9H841 368 aa17.12■□□□□ 0.33
CSPG5-204ENST00000465441 CAB39Q9Y376 341 aaPredicted RBP17.12■□□□□ 0.33
CSPG5-204ENST00000465441 MEGF8Q7Z7M0 2845 aa17.12■□□□□ 0.33
CSPG5-204ENST00000465441 AQP12BA6NM10 295 aa17.11■□□□□ 0.33
CSPG5-204ENST00000465441 CLPXO76031 633 aa17.11■□□□□ 0.33
CSPG5-204ENST00000465441 SLC35D3Q5M8T2 416 aa17.11■□□□□ 0.33
CSPG5-204ENST00000465441 TMEM236Q5W0B7 351 aa17.11■□□□□ 0.33
CSPG5-204ENST00000465441 ASPHD2Q6ICH7 369 aa17.11■□□□□ 0.33
CSPG5-204ENST00000465441 GDPGP1Q6ZNW5 385 aa17.11■□□□□ 0.33
CSPG5-204ENST00000465441 Q6ZSV7 163 aa17.11■□□□□ 0.33
CSPG5-204ENST00000465441 KRT77Q7Z794 578 aa17.11■□□□□ 0.33
CSPG5-204ENST00000465441 AQP12AQ8IXF9 295 aa17.11■□□□□ 0.33
CSPG5-204ENST00000465441 ZDHHC23Q8IYP9 409 aa17.11■□□□□ 0.33
CSPG5-204ENST00000465441 ZSCAN4Q8NAM6 433 aaPredicted RBP17.11■□□□□ 0.33
CSPG5-204ENST00000465441 CCDC197Q8NCU1 140 aa17.11■□□□□ 0.33
CSPG5-204ENST00000465441 TNFRSF14Q92956 283 aa17.11■□□□□ 0.33
CSPG5-204ENST00000465441 ZNF556Q9HAH1 456 aa17.11■□□□□ 0.33
CSPG5-204ENST00000465441 FAM53CQ9NYF3 392 aa17.11■□□□□ 0.33
CSPG5-204ENST00000465441 SLC25A10Q9UBX3 287 aaPredicted RBP17.11■□□□□ 0.33
CSPG5-204ENST00000465441 LRP12Q9Y561 859 aa17.11■□□□□ 0.33
CSPG5-204ENST00000465441 NPFFO15130 113 aa17.1■□□□□ 0.33
CSPG5-204ENST00000465441 RHBDL1O75783 438 aa17.1■□□□□ 0.33
CSPG5-204ENST00000465441 ACAA1P09110 424 aaPredicted RBP17.1■□□□□ 0.33
CSPG5-204ENST00000465441 FBP1P09467 338 aa17.1■□□□□ 0.33
CSPG5-204ENST00000465441 EEF1B2P24534 225 aaKnown RBP17.1■□□□□ 0.33
CSPG5-204ENST00000465441 PROK1P58294 105 aa17.1■□□□□ 0.33
CSPG5-204ENST00000465441 PSMA6P60900 246 aaKnown RBP17.1■□□□□ 0.33
CSPG5-204ENST00000465441 RPS7P62081 194 aaKnown RBP17.1■□□□□ 0.33
CSPG5-204ENST00000465441 GUCA2AQ02747 115 aa17.1■□□□□ 0.33
CSPG5-204ENST00000465441 KLRD1Q13241 179 aa17.1■□□□□ 0.33
CSPG5-204ENST00000465441 KRT74Q7RTS7 529 aa17.1■□□□□ 0.33
CSPG5-204ENST00000465441 LRTOMTQ8WZ04 291 aa17.1■□□□□ 0.33
CSPG5-204ENST00000465441 ZNRD1Q9P1U0 126 aa17.1■□□□□ 0.33
CSPG5-204ENST00000465441 NLKQ9UBE8 527 aa17.1■□□□□ 0.33
CSPG5-204ENST00000465441 LAMP5Q9UJQ1 280 aa17.1■□□□□ 0.33
CSPG5-204ENST00000465441 NKX6-3A6NJ46 265 aa17.09■□□□□ 0.33
CSPG5-204ENST00000465441 ZNF732B4DXR9 585 aa17.09■□□□□ 0.33
CSPG5-204ENST00000465441 PSMD9O00233 223 aa17.09■□□□□ 0.33
CSPG5-204ENST00000465441 TIMM23O14925 209 aa17.09■□□□□ 0.33
CSPG5-204ENST00000465441 SIGLEC5O15389 551 aa17.09■□□□□ 0.33
CSPG5-204ENST00000465441 ANXA8P13928 327 aa17.09■□□□□ 0.33
CSPG5-204ENST00000465441 NDUFB7P17568 137 aa17.09■□□□□ 0.33
CSPG5-204ENST00000465441 SLC2A5P22732 501 aa17.09■□□□□ 0.33
CSPG5-204ENST00000465441 GLRA1P23415 457 aa17.09■□□□□ 0.33
CSPG5-204ENST00000465441 MAP2K3P46734 347 aa17.09■□□□□ 0.33
CSPG5-204ENST00000465441 GABRA2P47869 451 aa17.09■□□□□ 0.33
CSPG5-204ENST00000465441 GPM6AP51674 278 aa17.09■□□□□ 0.33
CSPG5-204ENST00000465441 MIDNQ504T8 468 aa17.09■□□□□ 0.33
CSPG5-204ENST00000465441 DMRTC1Q5HYR2 192 aa17.09■□□□□ 0.33
CSPG5-204ENST00000465441 C1orf122Q6ZSJ8 110 aa17.09■□□□□ 0.33
CSPG5-204ENST00000465441 PNKDQ8N490 385 aa17.09■□□□□ 0.33
CSPG5-204ENST00000465441 OR51I2Q9H344 312 aa17.09■□□□□ 0.33
CSPG5-204ENST00000465441 ZNF816-ZNF321PA0A0X1KG74 233 aa17.08■□□□□ 0.32
CSPG5-204ENST00000465441 OR2AT4A6NND4 320 aa17.08■□□□□ 0.32
CSPG5-204ENST00000465441 M0QZ24 198 aa17.08■□□□□ 0.32
CSPG5-204ENST00000465441 E2F6O75461 281 aa17.08■□□□□ 0.32
CSPG5-204ENST00000465441 FAM107AO95990 144 aa17.08■□□□□ 0.32
CSPG5-204ENST00000465441 APOFQ13790 326 aa17.08■□□□□ 0.32
CSPG5-204ENST00000465441 CEP78Q5JTW2 689 aa17.08■□□□□ 0.32
CSPG5-204ENST00000465441 FAM81AQ8TBF8 368 aa17.08■□□□□ 0.32
CSPG5-204ENST00000465441 PPP1R14AQ96A00 147 aa17.08■□□□□ 0.32
CSPG5-204ENST00000465441 TEAD3Q99594 435 aa17.08■□□□□ 0.32
CSPG5-204ENST00000465441 RBM4BQ9BQ04 359 aaKnown RBP17.08■□□□□ 0.32
CSPG5-204ENST00000465441 YIPF3Q9GZM5 350 aa17.08■□□□□ 0.32
CSPG5-204ENST00000465441 C16orf95Q9H693 158 aa17.08■□□□□ 0.32
CSPG5-204ENST00000465441 FAM206AQ9NX38 181 aa17.08■□□□□ 0.32
CSPG5-204ENST00000465441 TVP23BQ9NYZ1 205 aa17.08■□□□□ 0.32
CSPG5-204ENST00000465441 MAB21L2Q9Y586 359 aa17.08■□□□□ 0.32
CSPG5-204ENST00000465441 A0A0U1RQV5 110 aa17.07■□□□□ 0.32
CSPG5-204ENST00000465441 TMEM269A0A1B0GVZ9 245 aa17.07■□□□□ 0.32
CSPG5-204ENST00000465441 MEIOCA2RUB1 952 aa17.07■□□□□ 0.32
CSPG5-204ENST00000465441 ACOD1A6NK06 481 aa17.07■□□□□ 0.32
CSPG5-204ENST00000465441 PSG2P11465 335 aa17.07■□□□□ 0.32
CSPG5-204ENST00000465441 UBE2E1P51965 193 aa17.07■□□□□ 0.32
CSPG5-204ENST00000465441 CAV3P56539 151 aa17.07■□□□□ 0.32
CSPG5-204ENST00000465441 GNG3P63215 75 aa17.07■□□□□ 0.32
CSPG5-204ENST00000465441 SNAPC1Q16533 368 aa17.07■□□□□ 0.32
CSPG5-204ENST00000465441 CEACAM21Q3KPI0 293 aa17.07■□□□□ 0.32
CSPG5-204ENST00000465441 KCTD18Q6PI47 426 aaPredicted RBP17.07■□□□□ 0.32
CSPG5-204ENST00000465441 DEGS2Q6QHC5 323 aa17.07■□□□□ 0.32
CSPG5-204ENST00000465441 MOB3CQ70IA8 216 aa17.07■□□□□ 0.32
CSPG5-204ENST00000465441 ZNRF1Q8ND25 227 aa17.07■□□□□ 0.32
CSPG5-204ENST00000465441 OR5A2Q8NGI9 324 aa17.07■□□□□ 0.32
CSPG5-204ENST00000465441 ZNF671Q8TAW3 534 aa17.07■□□□□ 0.32
CSPG5-204ENST00000465441 DUS3LQ96G46 650 aaKnown RBP17.07■□□□□ 0.32
CSPG5-204ENST00000465441 PBOV1Q9GZY1 135 aa17.07■□□□□ 0.32
CSPG5-204ENST00000465441 MMP27Q9H306 513 aa17.07■□□□□ 0.32
CSPG5-204ENST00000465441 SLC25A19Q9HC21 320 aa17.07■□□□□ 0.32
CSPG5-204ENST00000465441 IGKV1D-17A0A075B6S4 117 aa17.06■□□□□ 0.32
CSPG5-204ENST00000465441 A0A1W2PQ09 198 aa17.06■□□□□ 0.32
CSPG5-204ENST00000465441 BTBD17A6NE02 478 aa17.06■□□□□ 0.32
CSPG5-204ENST00000465441 M0R1W7 72 aa17.06■□□□□ 0.32
CSPG5-204ENST00000465441 TSPAN9O75954 239 aa17.06■□□□□ 0.32
CSPG5-204ENST00000465441 SAA4P35542 130 aa17.06■□□□□ 0.32
CSPG5-204ENST00000465441 DHRS7BQ6IAN0 325 aaPredicted RBP17.06■□□□□ 0.32
CSPG5-204ENST00000465441 TRPM8Q7Z2W7 1104 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms