RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-223	ENST00000465278	MED11	Q9P086	117 aa		4.11	□□□□□ -1.75
CACNA1C-223	ENST00000465278	DEC1	Q9P2X7	70 aa		4.11	□□□□□ -1.75
CACNA1C-223	ENST00000465278	SLC2A6	Q9UGQ3	507 aa		4.11	□□□□□ -1.75
CACNA1C-223	ENST00000465278	C3orf18	Q9UK00	162 aa		4.11	□□□□□ -1.75
CACNA1C-223	ENST00000465278	PILRA	Q9UKJ1	303 aa		4.11	□□□□□ -1.75
CACNA1C-223	ENST00000465278	EMCN	Q9ULC0	261 aa		4.11	□□□□□ -1.75
CACNA1C-223	ENST00000465278	SSR3	Q9UNL2	185 aa		4.11	□□□□□ -1.75
CACNA1C-223	ENST00000465278	MOK	Q9UQ07	419 aa		4.11	□□□□□ -1.75
CACNA1C-223	ENST00000465278	TMED7	Q9Y3B3	224 aa		4.11	□□□□□ -1.75
CACNA1C-223	ENST00000465278	MRPS18B	Q9Y676	258 aa	Known RBP	4.11	□□□□□ -1.75
CACNA1C-223	ENST00000465278	FRAS1	Q86XX4	4008 aa		4.11	□□□□□ -1.75
CACNA1C-223	ENST00000465278	IGLV3-16	A0A075B6K0	115 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	FAM240B	A0A1B0GVZ2	78 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278		A0A1B0GW55	424 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	MEX3A	A1L020	520 aa	Known RBP	4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	SMIM30	A4D0T7	59 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278		A8MU76	341 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278		A8MXK9	166 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	ZNF732	B4DXR9	585 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278		H0YIG0	161 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278		H3BMQ9	156 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278		H3BNH8	94 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278		H7C423	109 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	CCL21	O00585	134 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	SIGLEC5	O15389	551 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	GYG2	O15488	501 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	MRPS14	O60783	128 aa	Known RBP	4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	SNN	O75324	88 aa	Predicted RBP	4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	RAD51D	O75771	328 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	UPK1B	O75841	260 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	CEACAM4	O75871	244 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	TM7SF2	O76062	418 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	DUX4L2	P0CJ85	424 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	DUX4L3	P0CJ86	424 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	DUX4L4	P0CJ87	422 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	DUX4L5	P0CJ88	424 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	DUX4L6	P0CJ89	424 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	DUX4L7	P0CJ90	424 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	DRD5	P21918	477 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	RPS3	P23396	243 aa	Known RBP eCLIP	4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	GTF2E2	P29084	291 aa	Known RBP	4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	SRD5A2	P31213	254 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	RPA3	P35244	121 aa	Predicted RBP	4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	PMEL	P40967	661 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	WNT4	P56705	351 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	UBE2G2	P60604	165 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	RAB2A	P61019	212 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	CCL7	P80098	99 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	EMX2	Q04743	252 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	CHRNB3	Q05901	458 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	ZFP36L1	Q07352	338 aa	Known RBP	4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	ECH1	Q13011	328 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	PDZK1IP1	Q13113	114 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	GANAB	Q14697	944 aa	Known RBP	4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	MPPED2	Q15777	294 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	CARD16	Q5EG05	197 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	BEX5	Q5H9J7	111 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	TTC23	Q5W5X9	447 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	FBXW9	Q5XUX1	488 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	REP15	Q6BDI9	236 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	CGB2	Q6NT52	195 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	ACSM5	Q6NUN0	579 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	FAHD2B	Q6P2I3	314 aa	Predicted RBP	4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	C22orf39	Q6P5X5	142 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	GSG1L	Q6UXU4	331 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	DLEU7	Q6UYE1	221 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	ZNF573	Q86YE8	665 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	TGIF2LX	Q8IUE1	241 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	OFCC1	Q8IZS5	231 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	C9orf62	Q8N4C0	152 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	ARRDC1	Q8N5I2	433 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	HSD17B11	Q8NBQ5	300 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	OR51D1	Q8NGF3	324 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	OR51L1	Q8NGJ5	315 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	OR9A2	Q8NGT5	310 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	OR2L2	Q8NH16	312 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	TCTEX1D2	Q8WW35	142 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	CCDC124	Q96CT7	223 aa	Known RBP	4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	RAB3C	Q96E17	227 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	FAHD2A	Q96GK7	314 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	SAMD8	Q96LT4	415 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	HYLS1	Q96M11	299 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	SLC30A2	Q9BRI3	323 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	ING2	Q9H160	280 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	NT5DC2	Q9H857	520 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	TPT1P8	Q9HAU6	139 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	POPDC3	Q9HBV1	291 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	SIRT7	Q9NRC8	400 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	USE1	Q9NZ43	259 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	NUDT4	Q9NZJ9	180 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	CNIH4	Q9P003	139 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	DUX4	Q9UBX2	424 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	OPN4	Q9UHM6	478 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	FBXO5	Q9UKT4	447 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	FBXO7	Q9Y3I1	522 aa		4.1	□□□□□ -1.75
CACNA1C-223	ENST00000465278	PCM1	Q15154	2024 aa		4.09	□□□□□ -1.75
CACNA1C-223	ENST00000465278		A0A087WZY1	265 aa		4.09	□□□□□ -1.75
CACNA1C-223	ENST00000465278		A0A0A6YYC8	382 aa	Predicted RBP	4.09	□□□□□ -1.75
CACNA1C-223	ENST00000465278	METTL21EP	A6NDL7	271 aa		4.09	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms