RNA–Protein interactions for RNA: ENST00000465238.5

COL7A1-205, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-205ENST00000465238 OR2G6Q5TZ20 316 aa14.9□□□□□ -0.02
COL7A1-205ENST00000465238 ZNF676Q8N7Q3 588 aa14.9□□□□□ -0.02
COL7A1-205ENST00000465238 OR14K1Q8NGZ2 314 aa14.9□□□□□ -0.02
COL7A1-205ENST00000465238 ZFAND2BQ8WV99 257 aa14.9□□□□□ -0.02
COL7A1-205ENST00000465238 ERGIC1Q969X5 290 aa14.9□□□□□ -0.02
COL7A1-205ENST00000465238 RAB39BQ96DA2 213 aa14.9□□□□□ -0.02
COL7A1-205ENST00000465238 RASSF4Q9H2L5 321 aa14.9□□□□□ -0.02
COL7A1-205ENST00000465238 ZNF665Q9H7R5 613 aa14.9□□□□□ -0.02
COL7A1-205ENST00000465238 FKBP14Q9NWM8 211 aa14.9□□□□□ -0.02
COL7A1-205ENST00000465238 CLEC2DQ9UHP7 191 aa14.9□□□□□ -0.02
COL7A1-205ENST00000465238 V9GYS6 101 aa14.9□□□□□ -0.02
COL7A1-205ENST00000465238 LRRC30A6NM36 301 aa14.89□□□□□ -0.03
COL7A1-205ENST00000465238 DHRS7CA6NNS2 312 aa14.89□□□□□ -0.03
COL7A1-205ENST00000465238 E9PI62 339 aa14.89□□□□□ -0.03
COL7A1-205ENST00000465238 H3BSH0 61 aa14.89□□□□□ -0.03
COL7A1-205ENST00000465238 GRPP07492 148 aa14.89□□□□□ -0.03
COL7A1-205ENST00000465238 CCDC159P0C7I6 412 aa14.89□□□□□ -0.03
COL7A1-205ENST00000465238 IRF2P14316 349 aa14.89□□□□□ -0.03
COL7A1-205ENST00000465238 FAHP16930 419 aa14.89□□□□□ -0.03
COL7A1-205ENST00000465238 C21orf33P30042 268 aaPredicted RBP14.89□□□□□ -0.03
COL7A1-205ENST00000465238 GATA4P43694 442 aa14.89□□□□□ -0.03
COL7A1-205ENST00000465238 TGM4P49221 684 aa14.89□□□□□ -0.03
COL7A1-205ENST00000465238 AVPI1Q5T686 147 aa14.89□□□□□ -0.03
COL7A1-205ENST00000465238 PRAMEF6Q5VXH4 476 aa14.89□□□□□ -0.03
COL7A1-205ENST00000465238 FAHD2BQ6P2I3 314 aaPredicted RBP14.89□□□□□ -0.03
COL7A1-205ENST00000465238 MOB3CQ70IA8 216 aa14.89□□□□□ -0.03
COL7A1-205ENST00000465238 ZDHHC23Q8IYP9 409 aa14.89□□□□□ -0.03
COL7A1-205ENST00000465238 RDH10Q8IZV5 341 aa14.89□□□□□ -0.03
COL7A1-205ENST00000465238 OR11L1Q8NGX0 322 aa14.89□□□□□ -0.03
COL7A1-205ENST00000465238 OR52N1Q8NH53 320 aa14.89□□□□□ -0.03
COL7A1-205ENST00000465238 ZNF420Q8TAQ5 688 aaPredicted RBP14.89□□□□□ -0.03
COL7A1-205ENST00000465238 FAHD2AQ96GK7 314 aa14.89□□□□□ -0.03
COL7A1-205ENST00000465238 RTL8AQ9BWD3 113 aa14.89□□□□□ -0.03
COL7A1-205ENST00000465238 PPP1R3EQ9H7J1 279 aa14.89□□□□□ -0.03
COL7A1-205ENST00000465238 FN3KRPQ9HA64 309 aa14.89□□□□□ -0.03
COL7A1-205ENST00000465238 PLEKHA1Q9HB21 404 aa14.89□□□□□ -0.03
COL7A1-205ENST00000465238 UFSP2Q9NUQ7 469 aa14.89□□□□□ -0.03
COL7A1-205ENST00000465238 BABAM2Q9NXR7 383 aa14.89□□□□□ -0.03
COL7A1-205ENST00000465238 TRBV2A0A0J9YWF9 115 aa14.88□□□□□ -0.03
COL7A1-205ENST00000465238 LOC107986453A0A1B0GWG9 222 aa14.88□□□□□ -0.03
COL7A1-205ENST00000465238 OR4C45A6NMZ5 311 aa14.88□□□□□ -0.03
COL7A1-205ENST00000465238 MYL12BO14950 172 aa14.88□□□□□ -0.03
COL7A1-205ENST00000465238 VENTXO95231 258 aa14.88□□□□□ -0.03
COL7A1-205ENST00000465238 ISG15P05161 165 aa14.88□□□□□ -0.03
COL7A1-205ENST00000465238 CDK1P06493 297 aa14.88□□□□□ -0.03
COL7A1-205ENST00000465238 RPSAP08865 295 aaKnown RBP14.88□□□□□ -0.03
COL7A1-205ENST00000465238 CCDC58Q4VC31 144 aa14.88□□□□□ -0.03
COL7A1-205ENST00000465238 CLVS2Q5SYC1 327 aa14.88□□□□□ -0.03
COL7A1-205ENST00000465238 RPL22L1Q6P5R6 122 aaKnown RBP14.88□□□□□ -0.03
COL7A1-205ENST00000465238 Q6ZSR3 168 aa14.88□□□□□ -0.03
COL7A1-205ENST00000465238 KCTD8Q6ZWB6 473 aa14.88□□□□□ -0.03
COL7A1-205ENST00000465238 KRT74Q7RTS7 529 aa14.88□□□□□ -0.03
COL7A1-205ENST00000465238 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.88□□□□□ -0.03
COL7A1-205ENST00000465238 OR5AK2Q8NH90 309 aa14.88□□□□□ -0.03
COL7A1-205ENST00000465238 ZNF418Q8TF45 676 aaPredicted RBP14.88□□□□□ -0.03
COL7A1-205ENST00000465238 GATAD2BQ8WXI9 593 aa14.88□□□□□ -0.03
COL7A1-205ENST00000465238 OR5P3Q8WZ94 311 aa14.88□□□□□ -0.03
COL7A1-205ENST00000465238 ITPKCQ96DU7 683 aa14.88□□□□□ -0.03
COL7A1-205ENST00000465238 RNF170Q96K19 258 aa14.88□□□□□ -0.03
COL7A1-205ENST00000465238 COMMD4Q9H0A8 199 aa14.88□□□□□ -0.03
COL7A1-205ENST00000465238 HHLA2Q9UM44 414 aa14.88□□□□□ -0.03
COL7A1-205ENST00000465238 ERGIC3Q9Y282 383 aa14.88□□□□□ -0.03
COL7A1-205ENST00000465238 WIPI2Q9Y4P8 454 aa14.88□□□□□ -0.03
COL7A1-205ENST00000465238 A6NLC8 198 aa14.87□□□□□ -0.03
COL7A1-205ENST00000465238 TMEM212A6NML5 194 aa14.87□□□□□ -0.03
COL7A1-205ENST00000465238 DENRO43583 198 aaKnown RBP14.87□□□□□ -0.03
COL7A1-205ENST00000465238 PTBP3O95758 552 aaKnown RBP14.87□□□□□ -0.03
COL7A1-205ENST00000465238 NRASP01111 189 aa14.87□□□□□ -0.03
COL7A1-205ENST00000465238 GTF2A1P52655 376 aaPredicted RBP14.87□□□□□ -0.03
COL7A1-205ENST00000465238 MPPED2Q15777 294 aa14.87□□□□□ -0.03
COL7A1-205ENST00000465238 ZNF181Q2M3W8 571 aa14.87□□□□□ -0.03
COL7A1-205ENST00000465238 RBM48Q5RL73 367 aaKnown RBP14.87□□□□□ -0.03
COL7A1-205ENST00000465238 PLCXD3Q63HM9 321 aa14.87□□□□□ -0.03
COL7A1-205ENST00000465238 C1orf87Q8N0U7 546 aa14.87□□□□□ -0.03
COL7A1-205ENST00000465238 TRIM36Q9NQ86 728 aa14.87□□□□□ -0.03
COL7A1-205ENST00000465238 C1orf123Q9NWV4 160 aa14.87□□□□□ -0.03
COL7A1-205ENST00000465238 DCAF16Q9NXF7 216 aa14.87□□□□□ -0.03
COL7A1-205ENST00000465238 NPTNQ9Y639 398 aa14.87□□□□□ -0.03
COL7A1-205ENST00000465238 A0A0G2JMP0 313 aa14.86□□□□□ -0.03
COL7A1-205ENST00000465238 A0A0X1KG70 313 aa14.86□□□□□ -0.03
COL7A1-205ENST00000465238 ISPDA4D126 451 aa14.86□□□□□ -0.03
COL7A1-205ENST00000465238 A6NIN4 97 aa14.86□□□□□ -0.03
COL7A1-205ENST00000465238 TMEM178BH3BS89 294 aa14.86□□□□□ -0.03
COL7A1-205ENST00000465238 PLPP2O43688 288 aa14.86□□□□□ -0.03
COL7A1-205ENST00000465238 SERPINA3P01011 423 aa14.86□□□□□ -0.03
COL7A1-205ENST00000465238 IGHV2-5P01817 119 aa14.86□□□□□ -0.03
COL7A1-205ENST00000465238 PMELP40967 661 aa14.86□□□□□ -0.03
COL7A1-205ENST00000465238 SLC35A2P78381 396 aa14.86□□□□□ -0.03
COL7A1-205ENST00000465238 CEACAM21Q3KPI0 293 aa14.86□□□□□ -0.03
COL7A1-205ENST00000465238 CEP78Q5JTW2 689 aa14.86□□□□□ -0.03
COL7A1-205ENST00000465238 RNLSQ5VYX0 342 aa14.86□□□□□ -0.03
COL7A1-205ENST00000465238 C12orf54Q6X4T0 127 aa14.86□□□□□ -0.03
COL7A1-205ENST00000465238 NANOGP1Q8N7R0 232 aa14.86□□□□□ -0.03
COL7A1-205ENST00000465238 OR1M1Q8NGA1 313 aa14.86□□□□□ -0.03
COL7A1-205ENST00000465238 OR4M2Q8NGB6 313 aa14.86□□□□□ -0.03
COL7A1-205ENST00000465238 OR5A2Q8NGI9 324 aa14.86□□□□□ -0.03
COL7A1-205ENST00000465238 Q8TCH9 128 aa14.86□□□□□ -0.03
COL7A1-205ENST00000465238 C10orf35Q96D05 121 aa14.86□□□□□ -0.03
COL7A1-205ENST00000465238 DUSP21Q9H596 190 aa14.86□□□□□ -0.03
COL7A1-205ENST00000465238 ERVK-18Q9QC07 812 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms