RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 FBXO34Q9NWN3 711 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 OR5V1Q9UGF6 321 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 PILRBQ9UKJ0 227 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 ARID1AO14497 2285 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 TRAV30A0A087WSZ9 112 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 TRAV39A0A0B4J263 110 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 IGHV2OR16-5A0A0B4J2B6 119 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 A0A1B0GW15 77 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 GJE1A6NN92 205 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 RNF212BA8MTL3 300 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 B4DGG1 531 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 PPP5D1E7EU14 171 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 SLC16A5O15375 505 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 TAPBPO15533 448 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 LDB2O43679 373 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 WDR1O75083 606 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 B3GAT3O94766 335 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 CNIH1O95406 144 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 TOMM40O96008 361 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 MT-CO2P00403 227 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 PF4P02776 101 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 SERPINA7P05543 415 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 GYPBP06028 91 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 EPORP19235 508 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 PSMB10P40306 273 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 SOX2P48431 317 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 SLC25A1P53007 311 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 RPS13P62277 151 aaKnown RBP3.19□□□□□ -1.9
COL8A1-205ENST00000463753 HBA1P69905 142 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 ADAM8P78325 824 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 SLC35A1P78382 337 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 RBPJQ06330 500 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 PCBP2Q15366 365 aaKnown RBP eCLIP3.19□□□□□ -1.9
COL8A1-205ENST00000463753 AWAT2Q6E213 333 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 PWWP2BQ6NUJ5 590 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 TMEM205Q6UW68 189 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 COX15Q7KZN9 410 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 ZNF627Q7L945 461 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 TMPRSS12Q86WS5 348 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 NIT1Q86X76 327 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 ZNF761Q86XN6 746 aaPredicted RBP3.19□□□□□ -1.9
COL8A1-205ENST00000463753 DND1Q8IYX4 353 aaKnown RBP3.19□□□□□ -1.9
COL8A1-205ENST00000463753 OR8I2Q8N0Y5 310 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 TTC9BQ8N6N2 239 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 CYB561D1Q8N8Q1 229 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 REPS2Q8NFH8 660 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 TSTD1Q8NFU3 115 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 OR4D11Q8NGI4 311 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 OR6T1Q8NGN1 323 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 OR10S1Q8NGN2 331 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 GPX8Q8TED1 209 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 RAB8BQ92930 207 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 ZC2HC1AQ96GY0 325 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 SFRP2Q96HF1 295 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 SLC35G5Q96KT7 338 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 SMIM14Q96QK8 99 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 ATP6V0BQ99437 205 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 AIF1LQ9BQI0 150 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 BOCQ9BWV1 1114 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 RAB11FIP5Q9BXF6 653 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 KRTAP4-8Q9BYQ9 185 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 SLC39A8Q9C0K1 460 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 CST11Q9H112 138 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 RBKSQ9H477 322 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 ZNF703Q9H7S9 590 aaPredicted RBP3.19□□□□□ -1.9
COL8A1-205ENST00000463753 TMEM9BQ9NQ34 198 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 NRIP3Q9NQ35 241 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 MRPS18AQ9NVS2 196 aaKnown RBP3.19□□□□□ -1.9
COL8A1-205ENST00000463753 ABI3Q9P2A4 366 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 GULP1Q9UBP9 304 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 MTFP1Q9UDX5 166 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 MEMO1Q9Y316 297 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 ADAMTS9Q9P2N4 1935 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 KCNE1BA0A087WTH5 132 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 TRBV2A0A0J9YWF9 115 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 C1orf226A1L170 272 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 GAGE12BA1L429 117 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 B9A039 149 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 FTCDNL1E5RQL4 147 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 NPIPA5E9PKD4 350 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 NPIPA3F8WFD2 350 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 LEFTY2O00292 366 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 HSD17B6O14756 317 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 NUDT21O43809 227 aaKnown RBP3.19□□□□□ -1.9
COL8A1-205ENST00000463753 TMPRSS11DO60235 418 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 LEFTY1O75610 366 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 MMP23AO75900 390 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 MAS1P04201 325 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 CHRM2P08172 466 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 CD55P08174 381 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 AMD1P17707 334 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 SRMP19623 302 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 PPIBP23284 216 aaKnown RBP3.19□□□□□ -1.9
COL8A1-205ENST00000463753 HTR1FP30939 366 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 PRSS3P35030 304 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 CDKN1AP38936 164 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 GFRA1P56159 465 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 RANP62826 216 aaKnown RBP3.19□□□□□ -1.9
COL8A1-205ENST00000463753 HERV-K104P63124 156 aa3.19□□□□□ -1.9
COL8A1-205ENST00000463753 LTBQ06643 244 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms