RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 PQLC1Q8N2U9 271 aa13.5□□□□□ -0.25
COL1A1-202ENST00000463440 OR5A2Q8NGI9 324 aa13.5□□□□□ -0.25
COL1A1-202ENST00000463440 UBE2FQ969M7 185 aa13.5□□□□□ -0.25
COL1A1-202ENST00000463440 C12orf43Q96C57 262 aaKnown RBP13.5□□□□□ -0.25
COL1A1-202ENST00000463440 DNAJB11Q9UBS4 358 aa13.5□□□□□ -0.25
COL1A1-202ENST00000463440 OR5B21A6NL26 309 aa13.49□□□□□ -0.25
COL1A1-202ENST00000463440 SNTNA6NMZ2 147 aa13.49□□□□□ -0.25
COL1A1-202ENST00000463440 ZNF732B4DXR9 585 aa13.49□□□□□ -0.25
COL1A1-202ENST00000463440 C22orf46C9J442 243 aa13.49□□□□□ -0.25
COL1A1-202ENST00000463440 ENTPD6O75354 484 aa13.49□□□□□ -0.25
COL1A1-202ENST00000463440 NRASP01111 189 aa13.49□□□□□ -0.25
COL1A1-202ENST00000463440 LIPFP07098 398 aa13.49□□□□□ -0.25
COL1A1-202ENST00000463440 OCLNQ16625 522 aa13.49□□□□□ -0.25
COL1A1-202ENST00000463440 C11orf91Q3C1V1 193 aa13.49□□□□□ -0.25
COL1A1-202ENST00000463440 KLF17Q5JT82 389 aaPredicted RBP13.49□□□□□ -0.25
COL1A1-202ENST00000463440 ZNF684Q5T5D7 378 aa13.49□□□□□ -0.25
COL1A1-202ENST00000463440 PLCXD3Q63HM9 321 aa13.49□□□□□ -0.25
COL1A1-202ENST00000463440 RBMS3Q6XE24 437 aaKnown RBP13.49□□□□□ -0.25
COL1A1-202ENST00000463440 ZBTB49Q6ZSB9 765 aa13.49□□□□□ -0.25
COL1A1-202ENST00000463440 SLC36A1Q7Z2H8 476 aa13.49□□□□□ -0.25
COL1A1-202ENST00000463440 C22orf15Q8WYQ4 148 aa13.49□□□□□ -0.25
COL1A1-202ENST00000463440 STMN2Q93045 179 aa13.49□□□□□ -0.25
COL1A1-202ENST00000463440 UPRTQ96BW1 309 aa13.49□□□□□ -0.25
COL1A1-202ENST00000463440 FGF23Q9GZV9 251 aaPredicted RBP13.49□□□□□ -0.25
COL1A1-202ENST00000463440 GMPPBQ9Y5P6 360 aa13.49□□□□□ -0.25
COL1A1-202ENST00000463440 DHRS7CA6NNS2 312 aa13.48□□□□□ -0.25
COL1A1-202ENST00000463440 E9PQ18 207 aa13.48□□□□□ -0.25
COL1A1-202ENST00000463440 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.48□□□□□ -0.25
COL1A1-202ENST00000463440 TRIM77I1YAP6 450 aa13.48□□□□□ -0.25
COL1A1-202ENST00000463440 P2RY10O00398 339 aa13.48□□□□□ -0.25
COL1A1-202ENST00000463440 DVL1O14640 695 aa13.48□□□□□ -0.25
COL1A1-202ENST00000463440 BAG2O95816 211 aa13.48□□□□□ -0.25
COL1A1-202ENST00000463440 ECDO95905 644 aaPredicted RBP13.48□□□□□ -0.25
COL1A1-202ENST00000463440 GMFBP60983 142 aa13.48□□□□□ -0.25
COL1A1-202ENST00000463440 ACTC1P68032 377 aa13.48□□□□□ -0.25
COL1A1-202ENST00000463440 ACTA1P68133 377 aa13.48□□□□□ -0.25
COL1A1-202ENST00000463440 WDR38Q5JTN6 314 aa13.48□□□□□ -0.25
COL1A1-202ENST00000463440 CLVS2Q5SYC1 327 aa13.48□□□□□ -0.25
COL1A1-202ENST00000463440 DOK3Q7L591 496 aa13.48□□□□□ -0.25
COL1A1-202ENST00000463440 FAM220AQ7Z4H9 259 aa13.48□□□□□ -0.25
COL1A1-202ENST00000463440 CATSPERDQ86XM0 798 aa13.48□□□□□ -0.25
COL1A1-202ENST00000463440 PNLDC1Q8NA58 520 aaKnown RBP13.48□□□□□ -0.25
COL1A1-202ENST00000463440 ZNF671Q8TAW3 534 aa13.48□□□□□ -0.25
COL1A1-202ENST00000463440 ST8SIA4Q92187 359 aa13.48□□□□□ -0.25
COL1A1-202ENST00000463440 RNFT2Q96EX2 444 aa13.48□□□□□ -0.25
COL1A1-202ENST00000463440 MBOAT4Q96T53 435 aa13.48□□□□□ -0.25
COL1A1-202ENST00000463440 CCL13Q99616 98 aa13.48□□□□□ -0.25
COL1A1-202ENST00000463440 MS4A7Q9GZW8 240 aaPredicted RBP13.48□□□□□ -0.25
COL1A1-202ENST00000463440 RASSF4Q9H2L5 321 aa13.48□□□□□ -0.25
COL1A1-202ENST00000463440 OR51I2Q9H344 312 aa13.48□□□□□ -0.25
COL1A1-202ENST00000463440 SMURF1Q9HCE7 757 aa13.48□□□□□ -0.25
COL1A1-202ENST00000463440 ZNF69Q9UC07 566 aa13.48□□□□□ -0.25
COL1A1-202ENST00000463440 SLC22A13Q9Y226 551 aa13.48□□□□□ -0.25
COL1A1-202ENST00000463440 V9GYS6 101 aa13.48□□□□□ -0.25
COL1A1-202ENST00000463440 STAB1Q9NY15 2570 aa13.48□□□□□ -0.25
COL1A1-202ENST00000463440 A0A1B0GTI1 187 aa13.47□□□□□ -0.25
COL1A1-202ENST00000463440 A0A1B0GVI7 797 aa13.47□□□□□ -0.25
COL1A1-202ENST00000463440 DLGAP1O14490 977 aa13.47□□□□□ -0.25
COL1A1-202ENST00000463440 AKR7A2O43488 359 aa13.47□□□□□ -0.25
COL1A1-202ENST00000463440 MPZL2O60487 215 aa13.47□□□□□ -0.25
COL1A1-202ENST00000463440 FGF12P61328 243 aa13.47□□□□□ -0.25
COL1A1-202ENST00000463440 Q6ZSR3 168 aa13.47□□□□□ -0.25
COL1A1-202ENST00000463440 BTN2A1Q7KYR7 527 aa13.47□□□□□ -0.25
COL1A1-202ENST00000463440 OR14K1Q8NGZ2 314 aa13.47□□□□□ -0.25
COL1A1-202ENST00000463440 RORBQ92753 470 aa13.47□□□□□ -0.25
COL1A1-202ENST00000463440 SEH1LQ96EE3 360 aa13.47□□□□□ -0.25
COL1A1-202ENST00000463440 SLC29A1Q99808 456 aa13.47□□□□□ -0.25
COL1A1-202ENST00000463440 ADI1Q9BV57 179 aa13.47□□□□□ -0.25
COL1A1-202ENST00000463440 DNTTIP1Q9H147 329 aa13.47□□□□□ -0.25
COL1A1-202ENST00000463440 WDR13Q9H1Z4 485 aa13.47□□□□□ -0.25
COL1A1-202ENST00000463440 PLEKHA1Q9HB21 404 aa13.47□□□□□ -0.25
COL1A1-202ENST00000463440 GNG8Q9UK08 70 aa13.47□□□□□ -0.25
COL1A1-202ENST00000463440 PCDHGB1Q9Y5G3 927 aa13.47□□□□□ -0.25
COL1A1-202ENST00000463440 TRAV40A0A0B4J280 105 aa13.46□□□□□ -0.25
COL1A1-202ENST00000463440 DAPL1A0PJW8 107 aa13.46□□□□□ -0.25
COL1A1-202ENST00000463440 NKX6-3A6NJ46 265 aa13.46□□□□□ -0.25
COL1A1-202ENST00000463440 ZNF879B4DU55 563 aa13.46□□□□□ -0.25
COL1A1-202ENST00000463440 NDUFB3O43676 98 aa13.46□□□□□ -0.25
COL1A1-202ENST00000463440 CCL1P22362 96 aa13.46□□□□□ -0.25
COL1A1-202ENST00000463440 GLRA1P23415 457 aa13.46□□□□□ -0.25
COL1A1-202ENST00000463440 ZNF85Q03923 595 aa13.46□□□□□ -0.25
COL1A1-202ENST00000463440 ODF4Q2M2E3 257 aa13.46□□□□□ -0.25
COL1A1-202ENST00000463440 TP53I3Q53FA7 332 aa13.46□□□□□ -0.25
COL1A1-202ENST00000463440 DMRTC1Q5HYR2 192 aa13.46□□□□□ -0.25
COL1A1-202ENST00000463440 ATPAF1Q5TC12 328 aaPredicted RBP13.46□□□□□ -0.25
COL1A1-202ENST00000463440 TMEM42Q69YG0 159 aa13.46□□□□□ -0.25
COL1A1-202ENST00000463440 STUMQ69YW2 141 aa13.46□□□□□ -0.25
COL1A1-202ENST00000463440 HAGHLQ6PII5 290 aaPredicted RBP13.46□□□□□ -0.25
COL1A1-202ENST00000463440 KCTD20Q7Z5Y7 419 aa13.46□□□□□ -0.25
COL1A1-202ENST00000463440 ZNF573Q86YE8 665 aa13.46□□□□□ -0.25
COL1A1-202ENST00000463440 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.46□□□□□ -0.25
COL1A1-202ENST00000463440 CCDC54Q8NEL0 328 aa13.46□□□□□ -0.25
COL1A1-202ENST00000463440 OR5T2Q8NGG2 359 aa13.46□□□□□ -0.25
COL1A1-202ENST00000463440 AQP3Q92482 292 aa13.46□□□□□ -0.25
COL1A1-202ENST00000463440 MED30Q96HR3 178 aa13.46□□□□□ -0.25
COL1A1-202ENST00000463440 SNTG1Q9NSN8 517 aa13.46□□□□□ -0.25
COL1A1-202ENST00000463440 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.46□□□□□ -0.25
COL1A1-202ENST00000463440 IGHV3OR16-10A0A075B7F0 116 aa13.45□□□□□ -0.26
COL1A1-202ENST00000463440 GPR37O15354 613 aa13.45□□□□□ -0.26
COL1A1-202ENST00000463440 SYT7O43581 403 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms