RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 MRGPRFQ96AM1 343 aa11.1□□□□□ -0.63
VAPB-203ENST00000463370 TAAR6Q96RI8 345 aa11.1□□□□□ -0.63
VAPB-203ENST00000463370 NUDT16L1Q9BRJ7 211 aaKnown RBP11.1□□□□□ -0.63
VAPB-203ENST00000463370 OR14I1A6ND48 311 aa11.09□□□□□ -0.63
VAPB-203ENST00000463370 MFNGO00587 321 aa11.09□□□□□ -0.63
VAPB-203ENST00000463370 CEACAM4O75871 244 aa11.09□□□□□ -0.63
VAPB-203ENST00000463370 NRASP01111 189 aa11.09□□□□□ -0.63
VAPB-203ENST00000463370 UBBP0CG47 229 aa11.09□□□□□ -0.63
VAPB-203ENST00000463370 ANXA3P12429 323 aa11.09□□□□□ -0.63
VAPB-203ENST00000463370 HRH1P35367 487 aa11.09□□□□□ -0.63
VAPB-203ENST00000463370 SNRPD2P62316 118 aaKnown RBP11.09□□□□□ -0.63
VAPB-203ENST00000463370 STK11Q15831 433 aa11.09□□□□□ -0.63
VAPB-203ENST00000463370 SCGB2B2Q4G0G5 96 aa11.09□□□□□ -0.63
VAPB-203ENST00000463370 FBXW9Q5XUX1 488 aa11.09□□□□□ -0.63
VAPB-203ENST00000463370 ZNF626Q68DY1 528 aa11.09□□□□□ -0.63
VAPB-203ENST00000463370 C17orf107Q6ZR85 190 aa11.09□□□□□ -0.63
VAPB-203ENST00000463370 BPIFB2Q8N4F0 458 aa11.09□□□□□ -0.63
VAPB-203ENST00000463370 CCDC54Q8NEL0 328 aa11.09□□□□□ -0.63
VAPB-203ENST00000463370 TMEM246Q9BRR3 403 aa11.09□□□□□ -0.63
VAPB-203ENST00000463370 CST11Q9H112 138 aa11.09□□□□□ -0.63
VAPB-203ENST00000463370 POFUT1Q9H488 388 aa11.09□□□□□ -0.63
VAPB-203ENST00000463370 CLCF1Q9UBD9 225 aa11.09□□□□□ -0.63
VAPB-203ENST00000463370 PTPRZ1P23471 2315 aaPredicted RBP11.09□□□□□ -0.63
VAPB-203ENST00000463370 IGKV1-12A0A0C4DH73 117 aa11.09□□□□□ -0.63
VAPB-203ENST00000463370 G3V3Q6 166 aa11.09□□□□□ -0.63
VAPB-203ENST00000463370 SCGNO76038 276 aa11.09□□□□□ -0.63
VAPB-203ENST00000463370 IGKV1D-12P01611 117 aa11.09□□□□□ -0.63
VAPB-203ENST00000463370 TMEM225BP0DP42 221 aa11.09□□□□□ -0.63
VAPB-203ENST00000463370 SPINK2P20155 84 aa11.09□□□□□ -0.63
VAPB-203ENST00000463370 ERP29P30040 261 aaKnown RBP11.09□□□□□ -0.63
VAPB-203ENST00000463370 GK2Q14410 553 aaPredicted RBP11.09□□□□□ -0.63
VAPB-203ENST00000463370 C2orf68Q2NKX9 166 aa11.09□□□□□ -0.63
VAPB-203ENST00000463370 CLVS2Q5SYC1 327 aa11.09□□□□□ -0.63
VAPB-203ENST00000463370 OR56B1Q8NGI3 324 aa11.09□□□□□ -0.63
VAPB-203ENST00000463370 OR1K1Q8NGR3 316 aa11.09□□□□□ -0.63
VAPB-203ENST00000463370 ZFAND1Q8TCF1 268 aa11.09□□□□□ -0.63
VAPB-203ENST00000463370 PIGCQ92535 297 aa11.09□□□□□ -0.63
VAPB-203ENST00000463370 SPSB1Q96BD6 273 aa11.09□□□□□ -0.63
VAPB-203ENST00000463370 POM121L2Q96KW2 1035 aa11.09□□□□□ -0.63
VAPB-203ENST00000463370 TRIB1Q96RU8 372 aa11.09□□□□□ -0.63
VAPB-203ENST00000463370 PRRX2Q99811 253 aa11.09□□□□□ -0.63
VAPB-203ENST00000463370 RGCCQ9H4X1 137 aa11.09□□□□□ -0.63
VAPB-203ENST00000463370 ZNF175Q9Y473 711 aa11.09□□□□□ -0.63
VAPB-203ENST00000463370 PDGFAP04085 211 aa11.08□□□□□ -0.64
VAPB-203ENST00000463370 IL5P05113 134 aa11.08□□□□□ -0.64
VAPB-203ENST00000463370 MPGP29372 298 aa11.08□□□□□ -0.64
VAPB-203ENST00000463370 OR3A2P47893 321 aa11.08□□□□□ -0.64
VAPB-203ENST00000463370 GNG2P59768 71 aa11.08□□□□□ -0.64
VAPB-203ENST00000463370 NCCRP1Q6ZVX7 275 aaPredicted RBP11.08□□□□□ -0.64
VAPB-203ENST00000463370 NLRC3Q7RTR2 1065 aa11.08□□□□□ -0.64
VAPB-203ENST00000463370 URM1Q9BTM9 101 aaKnown RBP11.08□□□□□ -0.64
VAPB-203ENST00000463370 CHIAQ9BZP6 476 aa11.08□□□□□ -0.64
VAPB-203ENST00000463370 FGF23Q9GZV9 251 aaPredicted RBP11.08□□□□□ -0.64
VAPB-203ENST00000463370 DLL4Q9NR61 685 aa11.08□□□□□ -0.64
VAPB-203ENST00000463370 GHRLQ9UBU3 117 aa11.08□□□□□ -0.64
VAPB-203ENST00000463370 ZNF629Q9UEG4 869 aaPredicted RBP11.08□□□□□ -0.64
VAPB-203ENST00000463370 ATPIF1Q9UII2 106 aa11.08□□□□□ -0.64
VAPB-203ENST00000463370 GPR160Q9UJ42 338 aa11.08□□□□□ -0.64
VAPB-203ENST00000463370 A0A1W2PR80 420 aa11.08□□□□□ -0.64
VAPB-203ENST00000463370 K7EM74 188 aa11.08□□□□□ -0.64
VAPB-203ENST00000463370 XRCC2O43543 280 aa11.08□□□□□ -0.64
VAPB-203ENST00000463370 CREBL2O60519 120 aaPredicted RBP11.08□□□□□ -0.64
VAPB-203ENST00000463370 SS18L1O75177 396 aaPredicted RBP11.08□□□□□ -0.64
VAPB-203ENST00000463370 PMP2P02689 132 aa11.08□□□□□ -0.64
VAPB-203ENST00000463370 GABRR1P24046 479 aa11.08□□□□□ -0.64
VAPB-203ENST00000463370 BLVRBP30043 206 aaPredicted RBP11.08□□□□□ -0.64
VAPB-203ENST00000463370 RBP2P50120 134 aa11.08□□□□□ -0.64
VAPB-203ENST00000463370 MOB3CQ70IA8 216 aa11.08□□□□□ -0.64
VAPB-203ENST00000463370 P4HA3Q7Z4N8 544 aa11.08□□□□□ -0.64
VAPB-203ENST00000463370 TMED4Q7Z7H5 227 aa11.08□□□□□ -0.64
VAPB-203ENST00000463370 MYPOPQ86VE0 399 aaPredicted RBP11.08□□□□□ -0.64
VAPB-203ENST00000463370 BATF2Q8N1L9 274 aa11.08□□□□□ -0.64
VAPB-203ENST00000463370 MUC20Q8N307 709 aaPredicted RBP11.08□□□□□ -0.64
VAPB-203ENST00000463370 OR56B2PQ8NGI1 322 aa11.08□□□□□ -0.64
VAPB-203ENST00000463370 GRPEL2Q8TAA5 225 aa11.08□□□□□ -0.64
VAPB-203ENST00000463370 MAFIPQ8WZ33 124 aa11.08□□□□□ -0.64
VAPB-203ENST00000463370 BCL2L2Q92843 193 aaPredicted RBP11.08□□□□□ -0.64
VAPB-203ENST00000463370 FBXW5Q969U6 566 aa11.08□□□□□ -0.64
VAPB-203ENST00000463370 BORCS8Q96FH0 119 aa11.08□□□□□ -0.64
VAPB-203ENST00000463370 MED30Q96HR3 178 aa11.08□□□□□ -0.64
VAPB-203ENST00000463370 GMPPAQ96IJ6 420 aaPredicted RBP11.08□□□□□ -0.64
VAPB-203ENST00000463370 RADILQ96JH8 1075 aa11.08□□□□□ -0.64
VAPB-203ENST00000463370 S100A13Q99584 98 aa11.08□□□□□ -0.64
VAPB-203ENST00000463370 ZNF436Q9C0F3 470 aaPredicted RBP11.08□□□□□ -0.64
VAPB-203ENST00000463370 IFT46Q9NQC8 304 aa11.08□□□□□ -0.64
VAPB-203ENST00000463370 ZNF230Q9UIE0 474 aaPredicted RBP11.08□□□□□ -0.64
VAPB-203ENST00000463370 ZNF107Q9UII5 783 aaPredicted RBP11.08□□□□□ -0.64
VAPB-203ENST00000463370 ZNF391Q9UJN7 358 aa11.08□□□□□ -0.64
VAPB-203ENST00000463370 STARD10Q9Y365 291 aa11.08□□□□□ -0.64
VAPB-203ENST00000463370 NPTNQ9Y639 398 aa11.08□□□□□ -0.64
VAPB-203ENST00000463370 ZNF850A8MQ14 1090 aa11.07□□□□□ -0.64
VAPB-203ENST00000463370 KLK10O43240 276 aa11.07□□□□□ -0.64
VAPB-203ENST00000463370 GSTP1P09211 210 aaKnown RBP11.07□□□□□ -0.64
VAPB-203ENST00000463370 WNT5AP41221 380 aa11.07□□□□□ -0.64
VAPB-203ENST00000463370 CNN3Q15417 329 aaKnown RBP11.07□□□□□ -0.64
VAPB-203ENST00000463370 RNASE10Q5GAN6 216 aaKnown RBP11.07□□□□□ -0.64
VAPB-203ENST00000463370 ATPAF1Q5TC12 328 aaPredicted RBP11.07□□□□□ -0.64
VAPB-203ENST00000463370 PLCXD3Q63HM9 321 aa11.07□□□□□ -0.64
VAPB-203ENST00000463370 C6orf201Q7Z4U5 140 aa11.07□□□□□ -0.64
VAPB-203ENST00000463370 CDH24Q86UP0 819 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms