RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 RPS7P62081 194 aaKnown RBP7.55□□□□□ -1.2
BRCA1-207ENST00000461798 BNIP1Q12981 228 aa7.55□□□□□ -1.2
BRCA1-207ENST00000461798 PTGES3Q15185 160 aaKnown RBP7.55□□□□□ -1.2
BRCA1-207ENST00000461798 GFOD2Q3B7J2 385 aa7.55□□□□□ -1.2
BRCA1-207ENST00000461798 ZBTB37Q5TC79 503 aa7.55□□□□□ -1.2
BRCA1-207ENST00000461798 LCN1P1Q5VSP4 162 aa7.55□□□□□ -1.2
BRCA1-207ENST00000461798 METAP1DQ6UB28 335 aaPredicted RBP7.55□□□□□ -1.2
BRCA1-207ENST00000461798 ZNF788Q6ZQV5 615 aa7.55□□□□□ -1.2
BRCA1-207ENST00000461798 ZNF679Q8IYX0 411 aa7.55□□□□□ -1.2
BRCA1-207ENST00000461798 SCCPDHQ8NBX0 429 aa7.55□□□□□ -1.2
BRCA1-207ENST00000461798 OR5K1Q8NHB7 308 aa7.55□□□□□ -1.2
BRCA1-207ENST00000461798 ANGPTL6Q8NI99 470 aa7.55□□□□□ -1.2
BRCA1-207ENST00000461798 NPRL2Q8WTW4 380 aa7.55□□□□□ -1.2
BRCA1-207ENST00000461798 HPSE2Q8WWQ2 592 aa7.55□□□□□ -1.2
BRCA1-207ENST00000461798 ASB17Q8WXJ9 295 aa7.55□□□□□ -1.2
BRCA1-207ENST00000461798 PIGCQ92535 297 aa7.55□□□□□ -1.2
BRCA1-207ENST00000461798 TMIGD2Q96BF3 282 aa7.55□□□□□ -1.2
BRCA1-207ENST00000461798 SEH1LQ96EE3 360 aa7.55□□□□□ -1.2
BRCA1-207ENST00000461798 DUS3LQ96G46 650 aaKnown RBP7.55□□□□□ -1.2
BRCA1-207ENST00000461798 RNF170Q96K19 258 aa7.55□□□□□ -1.2
BRCA1-207ENST00000461798 HIST1H2AAQ96QV6 131 aa7.55□□□□□ -1.2
BRCA1-207ENST00000461798 OR8B4Q96RC9 309 aa7.55□□□□□ -1.2
BRCA1-207ENST00000461798 MNTQ99583 582 aa7.55□□□□□ -1.2
BRCA1-207ENST00000461798 PKP2Q99959 881 aa7.55□□□□□ -1.2
BRCA1-207ENST00000461798 DCTN5Q9BTE1 182 aa7.55□□□□□ -1.2
BRCA1-207ENST00000461798 MROQ9BYG7 248 aa7.55□□□□□ -1.2
BRCA1-207ENST00000461798 FGF23Q9GZV9 251 aaPredicted RBP7.55□□□□□ -1.2
BRCA1-207ENST00000461798 UNKLQ9H9P5 680 aaKnown RBP7.55□□□□□ -1.2
BRCA1-207ENST00000461798 ACOXLQ9NUZ1 547 aa7.55□□□□□ -1.2
BRCA1-207ENST00000461798 FAM206AQ9NX38 181 aa7.55□□□□□ -1.2
BRCA1-207ENST00000461798 ZNF816-ZNF321PA0A0X1KG74 233 aa7.54□□□□□ -1.2
BRCA1-207ENST00000461798 A0A1B0GVI7 797 aa7.54□□□□□ -1.2
BRCA1-207ENST00000461798 TMEM269A0A1B0GVZ9 245 aa7.54□□□□□ -1.2
BRCA1-207ENST00000461798 A0A1B0GW55 424 aa7.54□□□□□ -1.2
BRCA1-207ENST00000461798 PRR32B1ATL7 298 aa7.54□□□□□ -1.2
BRCA1-207ENST00000461798 PRKYO43930 277 aa7.54□□□□□ -1.2
BRCA1-207ENST00000461798 NDUFA7O95182 113 aa7.54□□□□□ -1.2
BRCA1-207ENST00000461798 DUX4L2P0CJ85 424 aa7.54□□□□□ -1.2
BRCA1-207ENST00000461798 DUX4L3P0CJ86 424 aa7.54□□□□□ -1.2
BRCA1-207ENST00000461798 DUX4L4P0CJ87 422 aa7.54□□□□□ -1.2
BRCA1-207ENST00000461798 DUX4L5P0CJ88 424 aa7.54□□□□□ -1.2
BRCA1-207ENST00000461798 DUX4L6P0CJ89 424 aa7.54□□□□□ -1.2
BRCA1-207ENST00000461798 DUX4L7P0CJ90 424 aa7.54□□□□□ -1.2
BRCA1-207ENST00000461798 GNG3P63215 75 aa7.54□□□□□ -1.2
BRCA1-207ENST00000461798 ELF3P78545 371 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-207ENST00000461798 RIPPLY1Q0D2K3 151 aa7.54□□□□□ -1.2
BRCA1-207ENST00000461798 ATP6AP1Q15904 470 aa7.54□□□□□ -1.2
BRCA1-207ENST00000461798 CEACAM21Q3KPI0 293 aa7.54□□□□□ -1.2
BRCA1-207ENST00000461798 LRRC10Q5BKY1 277 aa7.54□□□□□ -1.2
BRCA1-207ENST00000461798 AADACL4Q5VUY2 407 aa7.54□□□□□ -1.2
BRCA1-207ENST00000461798 SLX4IPQ5VYV7 408 aa7.54□□□□□ -1.2
BRCA1-207ENST00000461798 RUSC1-AS1Q66K80 236 aa7.54□□□□□ -1.2
BRCA1-207ENST00000461798 KDM4DQ6B0I6 523 aa7.54□□□□□ -1.2
BRCA1-207ENST00000461798 DUX4L9Q6RFH8 374 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-207ENST00000461798 Q6ZSR3 168 aa7.54□□□□□ -1.2
BRCA1-207ENST00000461798 MEPCEQ7L2J0 689 aaKnown RBP7.54□□□□□ -1.2
BRCA1-207ENST00000461798 LDLRAD3Q86YD5 345 aa7.54□□□□□ -1.2
BRCA1-207ENST00000461798 ZDHHC23Q8IYP9 409 aa7.54□□□□□ -1.2
BRCA1-207ENST00000461798 FGFRL1Q8N441 504 aa7.54□□□□□ -1.2
BRCA1-207ENST00000461798 KIR3DL3Q8N743 410 aa7.54□□□□□ -1.2
BRCA1-207ENST00000461798 FAM216BQ8N7L0 139 aa7.54□□□□□ -1.2
BRCA1-207ENST00000461798 OR5A2Q8NGI9 324 aa7.54□□□□□ -1.2
BRCA1-207ENST00000461798 TBC1D15Q8TC07 691 aa7.54□□□□□ -1.2
BRCA1-207ENST00000461798 SSMEM1Q8WWF3 244 aa7.54□□□□□ -1.2
BRCA1-207ENST00000461798 ST8SIA4Q92187 359 aa7.54□□□□□ -1.2
BRCA1-207ENST00000461798 RPL3LQ92901 407 aaKnown RBP7.54□□□□□ -1.2
BRCA1-207ENST00000461798 LHX4Q969G2 390 aa7.54□□□□□ -1.2
BRCA1-207ENST00000461798 MED30Q96HR3 178 aa7.54□□□□□ -1.2
BRCA1-207ENST00000461798 PBOV1Q9GZY1 135 aa7.54□□□□□ -1.2
BRCA1-207ENST00000461798 WDR13Q9H1Z4 485 aa7.54□□□□□ -1.2
BRCA1-207ENST00000461798 OR51I2Q9H344 312 aa7.54□□□□□ -1.2
BRCA1-207ENST00000461798 DUX4Q9UBX2 424 aa7.54□□□□□ -1.2
BRCA1-207ENST00000461798 NUFIP1Q9UHK0 495 aaKnown RBP7.54□□□□□ -1.2
BRCA1-207ENST00000461798 OR5B21A6NL26 309 aa7.53□□□□□ -1.2
BRCA1-207ENST00000461798 ZAR1LA6NP61 321 aa7.53□□□□□ -1.2
BRCA1-207ENST00000461798 ZNF732B4DXR9 585 aa7.53□□□□□ -1.2
BRCA1-207ENST00000461798 G3V2T6 193 aa7.53□□□□□ -1.2
BRCA1-207ENST00000461798 SIGLEC5O15389 551 aa7.53□□□□□ -1.2
BRCA1-207ENST00000461798 SRSF10O75494 262 aaKnown RBP7.53□□□□□ -1.2
BRCA1-207ENST00000461798 ACAA1P09110 424 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-207ENST00000461798 IER3P46695 156 aa7.53□□□□□ -1.2
BRCA1-207ENST00000461798 RIDAP52758 137 aaKnown RBP7.53□□□□□ -1.2
BRCA1-207ENST00000461798 CAV3P56539 151 aa7.53□□□□□ -1.2
BRCA1-207ENST00000461798 ACTR3P61158 418 aa7.53□□□□□ -1.2
BRCA1-207ENST00000461798 DGUOKQ16854 277 aa7.53□□□□□ -1.2
BRCA1-207ENST00000461798 ZNF829Q3KNS6 432 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-207ENST00000461798 NXNL2Q5VZ03 156 aa7.53□□□□□ -1.2
BRCA1-207ENST00000461798 TMEM42Q69YG0 159 aa7.53□□□□□ -1.2
BRCA1-207ENST00000461798 ZNF322Q6U7Q0 402 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-207ENST00000461798 CMTM4Q8IZR5 234 aa7.53□□□□□ -1.2
BRCA1-207ENST00000461798 LINC00528Q8N1L1 170 aa7.53□□□□□ -1.2
BRCA1-207ENST00000461798 Q8N7P7 452 aa7.53□□□□□ -1.2
BRCA1-207ENST00000461798 OR5T2Q8NGG2 359 aa7.53□□□□□ -1.2
BRCA1-207ENST00000461798 OR4F5Q8NH21 305 aa7.53□□□□□ -1.2
BRCA1-207ENST00000461798 ZNF671Q8TAW3 534 aa7.53□□□□□ -1.2
BRCA1-207ENST00000461798 TMEM163Q8TC26 289 aa7.53□□□□□ -1.2
BRCA1-207ENST00000461798 DYRK2Q92630 601 aa7.53□□□□□ -1.2
BRCA1-207ENST00000461798 TNFRSF14Q92956 283 aa7.53□□□□□ -1.2
BRCA1-207ENST00000461798 GAFA1Q96PS6 74 aa7.53□□□□□ -1.2
BRCA1-207ENST00000461798 CNN2Q99439 309 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms