RNA–Protein interactions for RNA: ENST00000461612.1

PRPF4B-202, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-202ENST00000461612 GLIPR2Q9H4G4 154 aa3.36□□□□□ -1.87
PRPF4B-202ENST00000461612 REEP4Q9H6H4 257 aa3.36□□□□□ -1.87
PRPF4B-202ENST00000461612 C1orf109Q9NX04 203 aa3.36□□□□□ -1.87
PRPF4B-202ENST00000461612 ZNF346Q9UL40 294 aaKnown RBP3.36□□□□□ -1.87
PRPF4B-202ENST00000461612 CAB39Q9Y376 341 aaPredicted RBP3.36□□□□□ -1.87
PRPF4B-202ENST00000461612 CPAMD8Q8IZJ3 1885 aa3.36□□□□□ -1.87
PRPF4B-202ENST00000461612 DOCK10Q96BY6 2186 aa3.36□□□□□ -1.87
PRPF4B-202ENST00000461612 ANKHD1Q8IWZ3 2542 aaKnown RBP3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 GOLGA8QA0A0J9YX86 632 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 EXOC1LA0A1B0GW35 172 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 GOLGA8OA6NCC3 632 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 DPRXA6NFQ7 191 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 OR6C65A6NJZ3 312 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 OR5H1A6NKK0 313 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 GOLGA8NF8WBI6 632 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 GOLGA8RI6L899 631 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 SULT2B1O00204 365 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 ABCD4O14678 606 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 ZNF264O43296 627 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 TCF21O43680 179 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 MRPL33O75394 65 aaKnown RBP3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 LYPLA1O75608 230 aaPredicted RBP3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 CIB2O75838 187 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 LYZL6O75951 148 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 KBTBD11O94819 623 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 CD8AP01732 235 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 FCGR3AP08637 254 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 CCDC159P0C7I6 412 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 MYL2P10916 166 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 UQCRBP14927 111 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 PTGFRP43088 359 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 CCT3P49368 545 aaKnown RBP3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 PRPS1P60891 318 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 CBX1P83916 185 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 SELENBP1Q13228 472 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 GNA13Q14344 377 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 TRIP10Q15642 601 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 HAGHQ16775 308 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 ANKRD55Q3KP44 614 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 KCTD21Q4G0X4 260 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 UNC50Q53HI1 259 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 LINC00242Q5T6M2 205 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 WDR25Q64LD2 544 aaPredicted RBP3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 OLFML2AQ68BL7 652 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 NIPAL3Q6P499 406 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 C12orf54Q6X4T0 127 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 TMPPEQ6ZT21 453 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 TRMT10CQ7L0Y3 403 aaKnown RBP3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 ASRGL1Q7L266 308 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 EIF3MQ7L2H7 374 aaKnown RBP3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 NANOGNBQ7Z5D8 188 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 ZNF433Q8N7K0 673 aaPredicted RBP3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 CCNYL1Q8N7R7 359 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 OR4F5Q8NH21 305 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 OR5W2Q8NH69 310 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 PIGXQ8TBF5 258 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 RAB3IL1Q8TBN0 382 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 TRMT10AQ8TBZ6 339 aaKnown RBP3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 GPR119Q8TDV5 335 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 ST8SIA1Q92185 356 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 APH1AQ96BI3 265 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 DDIT4LQ96D03 193 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 ZMYND19Q96E35 227 aaPredicted RBP3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 SH3YL1Q96HL8 342 aaPredicted RBP3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 ARL5BQ96KC2 179 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 MS4A4EQ96PG1 132 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 OR5B2Q96R09 309 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 HBEGFQ99075 208 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 FMO2Q99518 471 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 MRPL13Q9BYD1 178 aaKnown RBP3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 RAB1BQ9H0U4 201 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 PIGUQ9H490 435 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 NCOR1P1Q9H4R4 102 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 TMEM185BQ9H7F4 350 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 ANKRA2Q9H9E1 313 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 Q9HAA7 133 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 EML4Q9HC35 981 aaKnown RBP3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 AMBNQ9NP70 447 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 EXD2Q9NVH0 621 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 RDH8Q9NYR8 311 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 TAS2R16Q9NYV7 291 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 EIF3KQ9UBQ5 218 aaKnown RBP3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 ZNF225Q9UK10 706 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 DIMT1Q9UNQ2 313 aaKnown RBP3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 FOXJ3Q9UPW0 622 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 TRAPPC4Q9Y296 219 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 NOSIPQ9Y314 301 aaKnown RBP3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 HDGFL3Q9Y3E1 203 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 TIMM22Q9Y584 194 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 ABCA4P78363 2273 aa3.35□□□□□ -1.87
PRPF4B-202ENST00000461612 SCN2AQ99250 2005 aa3.34□□□□□ -1.87
PRPF4B-202ENST00000461612 CCDC88CQ9P219 2028 aa3.34□□□□□ -1.87
PRPF4B-202ENST00000461612 SH3PXD2BA1X283 911 aa3.34□□□□□ -1.87
PRPF4B-202ENST00000461612 XKRY2A2RUG3 117 aa3.34□□□□□ -1.87
PRPF4B-202ENST00000461612 M0R1B8 84 aa3.34□□□□□ -1.87
PRPF4B-202ENST00000461612 STX11O75558 287 aa3.34□□□□□ -1.87
PRPF4B-202ENST00000461612 NDUFA7O95182 113 aa3.34□□□□□ -1.87
PRPF4B-202ENST00000461612 CSTAP01040 98 aa3.34□□□□□ -1.87
PRPF4B-202ENST00000461612 IGKV1D-16P01601 117 aa3.34□□□□□ -1.87
PRPF4B-202ENST00000461612 OPN1LWP04000 364 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms