RNA–Protein interactions for RNA: ENST00000461553.1

USP4-206, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 544 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-206ENST00000461553 AKR7A2O43488 359 aa11.52□□□□□ -0.57
USP4-206ENST00000461553 IGHV1-69P01742 117 aa11.52□□□□□ -0.57
USP4-206ENST00000461553 CRYBA1P05813 215 aa11.52□□□□□ -0.57
USP4-206ENST00000461553 FCGR1AP12314 374 aa11.52□□□□□ -0.57
USP4-206ENST00000461553 ATP6V1B1P15313 513 aa11.52□□□□□ -0.57
USP4-206ENST00000461553 GLRA1P23415 457 aa11.52□□□□□ -0.57
USP4-206ENST00000461553 DCTDP32321 178 aa11.52□□□□□ -0.57
USP4-206ENST00000461553 GPM6AP51674 278 aa11.52□□□□□ -0.57
USP4-206ENST00000461553 GNG3P63215 75 aa11.52□□□□□ -0.57
USP4-206ENST00000461553 ELF3P78545 371 aaPredicted RBP11.52□□□□□ -0.57
USP4-206ENST00000461553 ROM1Q03395 351 aa11.52□□□□□ -0.57
USP4-206ENST00000461553 BNIP1Q12981 228 aa11.52□□□□□ -0.57
USP4-206ENST00000461553 CEP78Q5JTW2 689 aa11.52□□□□□ -0.57
USP4-206ENST00000461553 C1orf146Q5VVC0 180 aa11.52□□□□□ -0.57
USP4-206ENST00000461553 NXNL2Q5VZ03 156 aa11.52□□□□□ -0.57
USP4-206ENST00000461553 PLCXD3Q63HM9 321 aa11.52□□□□□ -0.57
USP4-206ENST00000461553 Q6YL49 198 aa11.52□□□□□ -0.57
USP4-206ENST00000461553 VMO1Q7Z5L0 202 aa11.52□□□□□ -0.57
USP4-206ENST00000461553 FGFRL1Q8N441 504 aa11.52□□□□□ -0.57
USP4-206ENST00000461553 TMEM86BQ8N661 226 aa11.52□□□□□ -0.57
USP4-206ENST00000461553 H1FXQ92522 213 aaKnown RBP11.52□□□□□ -0.57
USP4-206ENST00000461553 SEH1LQ96EE3 360 aa11.52□□□□□ -0.57
USP4-206ENST00000461553 FAM71F1Q96KD3 344 aaPredicted RBP11.52□□□□□ -0.57
USP4-206ENST00000461553 RAB3IPQ96QF0 476 aaPredicted RBP11.52□□□□□ -0.57
USP4-206ENST00000461553 FGF23Q9GZV9 251 aaPredicted RBP11.52□□□□□ -0.57
USP4-206ENST00000461553 GABARAPL1Q9H0R8 117 aa11.52□□□□□ -0.57
USP4-206ENST00000461553 WDR13Q9H1Z4 485 aa11.52□□□□□ -0.57
USP4-206ENST00000461553 CNTD2Q9H8S5 307 aa11.52□□□□□ -0.57
USP4-206ENST00000461553 GPR84Q9NQS5 396 aa11.52□□□□□ -0.57
USP4-206ENST00000461553 SNTG1Q9NSN8 517 aa11.52□□□□□ -0.57
USP4-206ENST00000461553 H2AFY2Q9P0M6 372 aaPredicted RBP11.52□□□□□ -0.57
USP4-206ENST00000461553 NUFIP1Q9UHK0 495 aaKnown RBP11.52□□□□□ -0.57
USP4-206ENST00000461553 ENPP5Q9UJA9 477 aa11.52□□□□□ -0.57
USP4-206ENST00000461553 OR5B21A6NL26 309 aa11.51□□□□□ -0.57
USP4-206ENST00000461553 LOC110117498-PIK3R3F6TDL0 507 aa11.51□□□□□ -0.57
USP4-206ENST00000461553 MELTFP08582 738 aa11.51□□□□□ -0.57
USP4-206ENST00000461553 FASP25445 335 aa11.51□□□□□ -0.57
USP4-206ENST00000461553 CXCR4P61073 352 aa11.51□□□□□ -0.57
USP4-206ENST00000461553 MFGE8Q08431 387 aaPredicted RBP11.51□□□□□ -0.57
USP4-206ENST00000461553 RIPPLY1Q0D2K3 151 aa11.51□□□□□ -0.57
USP4-206ENST00000461553 CEACAM21Q3KPI0 293 aa11.51□□□□□ -0.57
USP4-206ENST00000461553 ZBTB37Q5TC79 503 aa11.51□□□□□ -0.57
USP4-206ENST00000461553 SLX4IPQ5VYV7 408 aa11.51□□□□□ -0.57
USP4-206ENST00000461553 FIP1L1Q6UN15 594 aaKnown RBP11.51□□□□□ -0.57
USP4-206ENST00000461553 MEPCEQ7L2J0 689 aaKnown RBP11.51□□□□□ -0.57
USP4-206ENST00000461553 ZDHHC13Q8IUH4 622 aa11.51□□□□□ -0.57
USP4-206ENST00000461553 GID4Q8IVV7 300 aa11.51□□□□□ -0.57
USP4-206ENST00000461553 SLC35F2Q8IXU6 374 aa11.51□□□□□ -0.57
USP4-206ENST00000461553 KIR3DL3Q8N743 410 aa11.51□□□□□ -0.57
USP4-206ENST00000461553 TCEANCQ8N8B7 351 aa11.51□□□□□ -0.57
USP4-206ENST00000461553 OR5T2Q8NGG2 359 aa11.51□□□□□ -0.57
USP4-206ENST00000461553 TMEM163Q8TC26 289 aa11.51□□□□□ -0.57
USP4-206ENST00000461553 OR51E1Q8TCB6 317 aa11.51□□□□□ -0.57
USP4-206ENST00000461553 SSMEM1Q8WWF3 244 aa11.51□□□□□ -0.57
USP4-206ENST00000461553 TMIGD2Q96BF3 282 aa11.51□□□□□ -0.57
USP4-206ENST00000461553 DMRTB1Q96MA1 342 aa11.51□□□□□ -0.57
USP4-206ENST00000461553 GAFA1Q96PS6 74 aa11.51□□□□□ -0.57
USP4-206ENST00000461553 MNTQ99583 582 aa11.51□□□□□ -0.57
USP4-206ENST00000461553 NLKQ9UBE8 527 aa11.51□□□□□ -0.57
USP4-206ENST00000461553 SLC25A10Q9UBX3 287 aaPredicted RBP11.51□□□□□ -0.57
USP4-206ENST00000461553 POMT1Q9Y6A1 747 aa11.51□□□□□ -0.57
USP4-206ENST00000461553 ZAR1LA6NP61 321 aa11.5□□□□□ -0.57
USP4-206ENST00000461553 POM121CA8CG34 1229 aa11.5□□□□□ -0.57
USP4-206ENST00000461553 PRR32B1ATL7 298 aa11.5□□□□□ -0.57
USP4-206ENST00000461553 ZNF732B4DXR9 585 aa11.5□□□□□ -0.57
USP4-206ENST00000461553 ZNF670-ZNF695F2Z2N8 137 aa11.5□□□□□ -0.57
USP4-206ENST00000461553 MITFO75030 526 aaPredicted RBP11.5□□□□□ -0.57
USP4-206ENST00000461553 MTRF1O75570 445 aaKnown RBP11.5□□□□□ -0.57
USP4-206ENST00000461553 DHRS3O75911 302 aa11.5□□□□□ -0.57
USP4-206ENST00000461553 ATP5HO75947 161 aa11.5□□□□□ -0.57
USP4-206ENST00000461553 SELLP14151 372 aa11.5□□□□□ -0.57
USP4-206ENST00000461553 FAHP16930 419 aa11.5□□□□□ -0.57
USP4-206ENST00000461553 MDKP21741 143 aaPredicted RBP11.5□□□□□ -0.57
USP4-206ENST00000461553 ACTR3P61158 418 aa11.5□□□□□ -0.57
USP4-206ENST00000461553 GUCA2AQ02747 115 aa11.5□□□□□ -0.57
USP4-206ENST00000461553 FAM76BQ5HYJ3 339 aa11.5□□□□□ -0.57
USP4-206ENST00000461553 BCL2L15Q5TBC7 163 aa11.5□□□□□ -0.57
USP4-206ENST00000461553 ATPAF1Q5TC12 328 aaPredicted RBP11.5□□□□□ -0.57
USP4-206ENST00000461553 C12orf73Q69YU5 71 aa11.5□□□□□ -0.57
USP4-206ENST00000461553 ZNF322Q6U7Q0 402 aaPredicted RBP11.5□□□□□ -0.57
USP4-206ENST00000461553 PDZD9Q8IXQ8 264 aa11.5□□□□□ -0.57
USP4-206ENST00000461553 ANGPTL6Q8NI99 470 aa11.5□□□□□ -0.57
USP4-206ENST00000461553 MED30Q96HR3 178 aa11.5□□□□□ -0.57
USP4-206ENST00000461553 DCTN5Q9BTE1 182 aa11.5□□□□□ -0.57
USP4-206ENST00000461553 CHIAQ9BZP6 476 aa11.5□□□□□ -0.57
USP4-206ENST00000461553 ADGRL4Q9HBW9 690 aa11.5□□□□□ -0.57
USP4-206ENST00000461553 SIRT7Q9NRC8 400 aa11.5□□□□□ -0.57
USP4-206ENST00000461553 PIGLQ9Y2B2 252 aa11.5□□□□□ -0.57
USP4-206ENST00000461553 PKD1L1Q8TDX9 2849 aa11.5□□□□□ -0.57
USP4-206ENST00000461553 DSCAML1Q8TD84 2053 aa11.49□□□□□ -0.57
USP4-206ENST00000461553 A0A0U1RQK1 487 aa11.49□□□□□ -0.57
USP4-206ENST00000461553 A0A1B0GUS0 222 aa11.49□□□□□ -0.57
USP4-206ENST00000461553 A0A1W2PQ09 198 aa11.49□□□□□ -0.57
USP4-206ENST00000461553 FAM181BA6NEQ2 426 aa11.49□□□□□ -0.57
USP4-206ENST00000461553 OR2AT4A6NND4 320 aa11.49□□□□□ -0.57
USP4-206ENST00000461553 SIGLEC5O15389 551 aa11.49□□□□□ -0.57
USP4-206ENST00000461553 RHBDL1O75783 438 aa11.49□□□□□ -0.57
USP4-206ENST00000461553 CIB2O75838 187 aa11.49□□□□□ -0.57
USP4-206ENST00000461553 IGLV3-1P01715 115 aa11.49□□□□□ -0.57
USP4-206ENST00000461553 TTRP02766 147 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms