RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 RANBP1P43487 201 aa1.95□□□□□ -2.1
VCL-203ENST00000461383 ATP5J2P56134 94 aa1.95□□□□□ -2.1
VCL-203ENST00000461383 KRTAP12-2P59991 146 aa1.95□□□□□ -2.1
VCL-203ENST00000461383 ADIGQ0VDE8 80 aa1.95□□□□□ -2.1
VCL-203ENST00000461383 SLC25A35Q3KQZ1 300 aa1.95□□□□□ -2.1
VCL-203ENST00000461383 TEX30Q5JUR7 227 aa1.95□□□□□ -2.1
VCL-203ENST00000461383 FAM27D1Q5T7N8 215 aa1.95□□□□□ -2.1
VCL-203ENST00000461383 TMEM236Q5W0B7 351 aa1.95□□□□□ -2.1
VCL-203ENST00000461383 SHISA6Q6ZSJ9 500 aa1.95□□□□□ -2.1
VCL-203ENST00000461383 BHLHA15Q7RTS1 189 aaPredicted RBP1.95□□□□□ -2.1
VCL-203ENST00000461383 RBM45Q8IUH3 476 aaKnown RBP1.95□□□□□ -2.1
VCL-203ENST00000461383 DRAM1Q8N682 238 aa1.95□□□□□ -2.1
VCL-203ENST00000461383 SPERTQ8NA61 448 aa1.95□□□□□ -2.1
VCL-203ENST00000461383 CYB561A3Q8NBI2 242 aa1.95□□□□□ -2.1
VCL-203ENST00000461383 OR5T1Q8NG75 326 aa1.95□□□□□ -2.1
VCL-203ENST00000461383 OR4M1Q8NGD0 313 aa1.95□□□□□ -2.1
VCL-203ENST00000461383 OR4D6Q8NGJ1 314 aa1.95□□□□□ -2.1
VCL-203ENST00000461383 OR6K2Q8NGY2 324 aa1.95□□□□□ -2.1
VCL-203ENST00000461383 CIRBP-AS1Q8TBR5 109 aa1.95□□□□□ -2.1
VCL-203ENST00000461383 CDKL2Q92772 493 aa1.95□□□□□ -2.1
VCL-203ENST00000461383 SLC25A46Q96AG3 418 aa1.95□□□□□ -2.1
VCL-203ENST00000461383 C19orf60Q96EN9 201 aa1.95□□□□□ -2.1
VCL-203ENST00000461383 LINC00477Q96M19 166 aa1.95□□□□□ -2.1
VCL-203ENST00000461383 PRRG3Q9BZD7 231 aa1.95□□□□□ -2.1
VCL-203ENST00000461383 OR51B5Q9H339 312 aa1.95□□□□□ -2.1
VCL-203ENST00000461383 ZNF442Q9H7R0 627 aa1.95□□□□□ -2.1
VCL-203ENST00000461383 NECAP2Q9NVZ3 263 aa1.95□□□□□ -2.1
VCL-203ENST00000461383 SDHAF2Q9NX18 166 aa1.95□□□□□ -2.1
VCL-203ENST00000461383 C21orf62Q9NYP8 219 aa1.95□□□□□ -2.1
VCL-203ENST00000461383 CHMP5Q9NZZ3 219 aa1.95□□□□□ -2.1
VCL-203ENST00000461383 ZNF229Q9UJW7 825 aa1.95□□□□□ -2.1
VCL-203ENST00000461383 RBMX2Q9Y388 322 aaKnown RBP1.95□□□□□ -2.1
VCL-203ENST00000461383 ENPP4Q9Y6X5 453 aa1.95□□□□□ -2.1
VCL-203ENST00000461383 MIA3Q5JRA6 1907 aa1.95□□□□□ -2.1
VCL-203ENST00000461383 PTPRTO14522 1441 aa1.94□□□□□ -2.1
VCL-203ENST00000461383 IGHV3-72A0A0B4J1Y9 119 aa1.94□□□□□ -2.1
VCL-203ENST00000461383 TRAV8-6A0A0B4J262 113 aa1.94□□□□□ -2.1
VCL-203ENST00000461383 IGHV2OR16-5A0A0B4J2B6 119 aa1.94□□□□□ -2.1
VCL-203ENST00000461383 ANKRD20A5PA0PJZ0 165 aa1.94□□□□□ -2.1
VCL-203ENST00000461383 ISPDA4D126 451 aa1.94□□□□□ -2.1
VCL-203ENST00000461383 TMEM150BA6NC51 233 aa1.94□□□□□ -2.1
VCL-203ENST00000461383 CYB5R3P00387 301 aaPredicted RBP1.94□□□□□ -2.1
VCL-203ENST00000461383 IGLV3-25P01717 112 aa1.94□□□□□ -2.1
VCL-203ENST00000461383 RPN2P04844 631 aa1.94□□□□□ -2.1
VCL-203ENST00000461383 BGNP21810 368 aa1.94□□□□□ -2.1
VCL-203ENST00000461383 PRKACBP22694 351 aa1.94□□□□□ -2.1
VCL-203ENST00000461383 PSMB5P28074 263 aa1.94□□□□□ -2.1
VCL-203ENST00000461383 PRSS3P35030 304 aa1.94□□□□□ -2.1
VCL-203ENST00000461383 GALR1P47211 349 aa1.94□□□□□ -2.1
VCL-203ENST00000461383 RGS6P49758 472 aa1.94□□□□□ -2.1
VCL-203ENST00000461383 MLF1P58340 268 aa1.94□□□□□ -2.1
VCL-203ENST00000461383 EIF4EBP1Q13541 118 aaPredicted RBP1.94□□□□□ -2.1
VCL-203ENST00000461383 MAPRE2Q15555 327 aa1.94□□□□□ -2.1
VCL-203ENST00000461383 RNASE13Q5GAN3 156 aaKnown RBP1.94□□□□□ -2.1
VCL-203ENST00000461383 LCE3EQ5T5B0 92 aa1.94□□□□□ -2.1
VCL-203ENST00000461383 HHATQ5VTY9 493 aa1.94□□□□□ -2.1
VCL-203ENST00000461383 Q5W150 140 aa1.94□□□□□ -2.1
VCL-203ENST00000461383 CA13Q8N1Q1 262 aa1.94□□□□□ -2.1
VCL-203ENST00000461383 SYS1Q8N2H4 156 aa1.94□□□□□ -2.1
VCL-203ENST00000461383 TCAIMQ8N3R3 496 aa1.94□□□□□ -2.1
VCL-203ENST00000461383 OR1L1Q8NH94 360 aa1.94□□□□□ -2.1
VCL-203ENST00000461383 ZFAND1Q8TCF1 268 aa1.94□□□□□ -2.1
VCL-203ENST00000461383 SFXN5Q8TD22 340 aa1.94□□□□□ -2.1
VCL-203ENST00000461383 DOK4Q8TEW6 326 aa1.94□□□□□ -2.1
VCL-203ENST00000461383 CACNG8Q8WXS5 425 aa1.94□□□□□ -2.1
VCL-203ENST00000461383 MRPL48Q96GC5 212 aaKnown RBP1.94□□□□□ -2.1
VCL-203ENST00000461383 SNF8Q96H20 258 aa1.94□□□□□ -2.1
VCL-203ENST00000461383 SPIN2AQ99865 258 aa1.94□□□□□ -2.1
VCL-203ENST00000461383 RNF5Q99942 180 aa1.94□□□□□ -2.1
VCL-203ENST00000461383 SPIN2BQ9BPZ2 258 aa1.94□□□□□ -2.1
VCL-203ENST00000461383 MARVELD1Q9BSK0 173 aa1.94□□□□□ -2.1
VCL-203ENST00000461383 CHCHD7Q9BUK0 85 aa1.94□□□□□ -2.1
VCL-203ENST00000461383 ULBP2Q9BZM5 246 aa1.94□□□□□ -2.1
VCL-203ENST00000461383 COA1Q9GZY4 146 aa1.94□□□□□ -2.1
VCL-203ENST00000461383 SYT4Q9H2B2 425 aa1.94□□□□□ -2.1
VCL-203ENST00000461383 WDR55Q9H6Y2 383 aaPredicted RBP1.94□□□□□ -2.1
VCL-203ENST00000461383 VAPAQ9P0L0 249 aa1.94□□□□□ -2.1
VCL-203ENST00000461383 SLC7A11Q9UPY5 501 aa1.94□□□□□ -2.1
VCL-203ENST00000461383 ORC6Q9Y5N6 252 aa1.94□□□□□ -2.1
VCL-203ENST00000461383 NPHP4O75161 1426 aaPredicted RBP1.93□□□□□ -2.1
VCL-203ENST00000461383 ZNF608Q9ULD9 1512 aaPredicted RBP1.93□□□□□ -2.1
VCL-203ENST00000461383 THADAQ6YHU6 1953 aa1.93□□□□□ -2.1
VCL-203ENST00000461383 TRAV40A0A0B4J280 105 aa1.93□□□□□ -2.1
VCL-203ENST00000461383 MGAT4DA6NG13 374 aa1.93□□□□□ -2.1
VCL-203ENST00000461383 ZNF850A8MQ14 1090 aa1.93□□□□□ -2.1
VCL-203ENST00000461383 J3QT63 122 aa1.93□□□□□ -2.1
VCL-203ENST00000461383 TCAPO15273 167 aa1.93□□□□□ -2.1
VCL-203ENST00000461383 RNF113AO15541 343 aaKnown RBP1.93□□□□□ -2.1
VCL-203ENST00000461383 ZNF207O43670 478 aaKnown RBP1.93□□□□□ -2.1
VCL-203ENST00000461383 CCDC22O60826 627 aa1.93□□□□□ -2.1
VCL-203ENST00000461383 SC5DO75845 299 aa1.93□□□□□ -2.1
VCL-203ENST00000461383 CD74P04233 296 aa1.93□□□□□ -2.1
VCL-203ENST00000461383 LIPCP11150 499 aa1.93□□□□□ -2.1
VCL-203ENST00000461383 CASQ1P31415 396 aa1.93□□□□□ -2.1
VCL-203ENST00000461383 DNASE1L1P49184 302 aa1.93□□□□□ -2.1
VCL-203ENST00000461383 PRLHRP49683 370 aa1.93□□□□□ -2.1
VCL-203ENST00000461383 LINC00315P59091 139 aa1.93□□□□□ -2.1
VCL-203ENST00000461383 DSTNP60981 165 aa1.93□□□□□ -2.1
VCL-203ENST00000461383 PPP1CAP62136 330 aa1.93□□□□□ -2.1
VCL-203ENST00000461383 VSNL1P62760 191 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms