RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 DNASE1P24855 282 aa6.8□□□□□ -1.32
ECHDC1-212ENST00000461239 GLRXP35754 106 aa6.8□□□□□ -1.32
ECHDC1-212ENST00000461239 CDKN1AP38936 164 aa6.8□□□□□ -1.32
ECHDC1-212ENST00000461239 GUCA1AP43080 201 aaPredicted RBP6.8□□□□□ -1.32
ECHDC1-212ENST00000461239 HCCSP53701 268 aa6.8□□□□□ -1.32
ECHDC1-212ENST00000461239 UCP2P55851 309 aa6.8□□□□□ -1.32
ECHDC1-212ENST00000461239 PCBD1P61457 104 aa6.8□□□□□ -1.32
ECHDC1-212ENST00000461239 SCRN3Q0VDG4 424 aa6.8□□□□□ -1.32
ECHDC1-212ENST00000461239 SNTB2Q13425 540 aaKnown RBP6.8□□□□□ -1.32
ECHDC1-212ENST00000461239 SNAPC1Q16533 368 aa6.8□□□□□ -1.32
ECHDC1-212ENST00000461239 TEX30Q5JUR7 227 aa6.8□□□□□ -1.32
ECHDC1-212ENST00000461239 ARFGEF3Q5TH69 2177 aa6.8□□□□□ -1.32
ECHDC1-212ENST00000461239 ZBTB49Q6ZSB9 765 aa6.8□□□□□ -1.32
ECHDC1-212ENST00000461239 RFPL4BQ6ZWI9 263 aa6.8□□□□□ -1.32
ECHDC1-212ENST00000461239 NAA40Q86UY6 237 aa6.8□□□□□ -1.32
ECHDC1-212ENST00000461239 ANKRD13BQ86YJ7 626 aa6.8□□□□□ -1.32
ECHDC1-212ENST00000461239 TCEANCQ8N8B7 351 aa6.8□□□□□ -1.32
ECHDC1-212ENST00000461239 OR6K6Q8NGW6 343 aa6.8□□□□□ -1.32
ECHDC1-212ENST00000461239 OR1F12Q8NHA8 337 aa6.8□□□□□ -1.32
ECHDC1-212ENST00000461239 TMEM163Q8TC26 289 aa6.8□□□□□ -1.32
ECHDC1-212ENST00000461239 ST7LQ8TDW4 575 aa6.8□□□□□ -1.32
ECHDC1-212ENST00000461239 ZMYND19Q96E35 227 aaPredicted RBP6.8□□□□□ -1.32
ECHDC1-212ENST00000461239 RRNAD1Q96FB5 475 aaKnown RBP6.8□□□□□ -1.32
ECHDC1-212ENST00000461239 IL4I1Q96RQ9 567 aa6.8□□□□□ -1.32
ECHDC1-212ENST00000461239 TEAD3Q99594 435 aa6.8□□□□□ -1.32
ECHDC1-212ENST00000461239 DOK1Q99704 481 aa6.8□□□□□ -1.32
ECHDC1-212ENST00000461239 CCL19Q99731 98 aa6.8□□□□□ -1.32
ECHDC1-212ENST00000461239 FOXC2Q99958 501 aa6.8□□□□□ -1.32
ECHDC1-212ENST00000461239 C9orf16Q9BUW7 83 aa6.8□□□□□ -1.32
ECHDC1-212ENST00000461239 MRPL37Q9BZE1 423 aaKnown RBP6.8□□□□□ -1.32
ECHDC1-212ENST00000461239 KCNN2Q9H2S1 579 aa6.8□□□□□ -1.32
ECHDC1-212ENST00000461239 OR51B6Q9H340 312 aa6.8□□□□□ -1.32
ECHDC1-212ENST00000461239 ZNF442Q9H7R0 627 aa6.8□□□□□ -1.32
ECHDC1-212ENST00000461239 PLEK2Q9NYT0 353 aa6.8□□□□□ -1.32
ECHDC1-212ENST00000461239 FBXL3Q9UKT7 428 aa6.8□□□□□ -1.32
ECHDC1-212ENST00000461239 FZR1Q9UM11 496 aa6.8□□□□□ -1.32
ECHDC1-212ENST00000461239 KLHDC2Q9Y2U9 406 aa6.8□□□□□ -1.32
ECHDC1-212ENST00000461239 GAGE12JA6NER3 117 aa6.79□□□□□ -1.32
ECHDC1-212ENST00000461239 CASQ2O14958 399 aaPredicted RBP6.79□□□□□ -1.32
ECHDC1-212ENST00000461239 CLPTM1O96005 669 aa6.79□□□□□ -1.32
ECHDC1-212ENST00000461239 ZNF250P15622 560 aa6.79□□□□□ -1.32
ECHDC1-212ENST00000461239 CCNOP22674 350 aa6.79□□□□□ -1.32
ECHDC1-212ENST00000461239 MYF6P23409 242 aa6.79□□□□□ -1.32
ECHDC1-212ENST00000461239 FMO3P31513 532 aa6.79□□□□□ -1.32
ECHDC1-212ENST00000461239 APLNRP35414 380 aa6.79□□□□□ -1.32
ECHDC1-212ENST00000461239 HTR5AP47898 357 aa6.79□□□□□ -1.32
ECHDC1-212ENST00000461239 ENTPD1P49961 510 aa6.79□□□□□ -1.32
ECHDC1-212ENST00000461239 GDI2P50395 445 aaKnown RBP6.79□□□□□ -1.32
ECHDC1-212ENST00000461239 APOFQ13790 326 aa6.79□□□□□ -1.32
ECHDC1-212ENST00000461239 RAB35Q15286 201 aa6.79□□□□□ -1.32
ECHDC1-212ENST00000461239 EFNB3Q15768 340 aa6.79□□□□□ -1.32
ECHDC1-212ENST00000461239 LRRC36Q1X8D7 754 aa6.79□□□□□ -1.32
ECHDC1-212ENST00000461239 TBC1D28Q2M2D7 210 aa6.79□□□□□ -1.32
ECHDC1-212ENST00000461239 KRTAP15-1Q3LI76 137 aa6.79□□□□□ -1.32
ECHDC1-212ENST00000461239 KLHL12Q53G59 568 aa6.79□□□□□ -1.32
ECHDC1-212ENST00000461239 ELFN2Q5R3F8 820 aa6.79□□□□□ -1.32
ECHDC1-212ENST00000461239 OGFRL1Q5TC84 451 aaPredicted RBP6.79□□□□□ -1.32
ECHDC1-212ENST00000461239 COLCA1Q6ZS62 124 aa6.79□□□□□ -1.32
ECHDC1-212ENST00000461239 DPY19L4Q7Z388 723 aa6.79□□□□□ -1.32
ECHDC1-212ENST00000461239 DCXRQ7Z4W1 244 aa6.79□□□□□ -1.32
ECHDC1-212ENST00000461239 ZCCHC24Q8N2G6 241 aaKnown RBP6.79□□□□□ -1.32
ECHDC1-212ENST00000461239 DDB2Q92466 427 aa6.79□□□□□ -1.32
ECHDC1-212ENST00000461239 STMN2Q93045 179 aa6.79□□□□□ -1.32
ECHDC1-212ENST00000461239 PIGTQ969N2 578 aa6.79□□□□□ -1.32
ECHDC1-212ENST00000461239 MRPL24Q96A35 216 aaKnown RBP6.79□□□□□ -1.32
ECHDC1-212ENST00000461239 OTULINQ96BN8 352 aa6.79□□□□□ -1.32
ECHDC1-212ENST00000461239 C4orf45Q96LM5 186 aa6.79□□□□□ -1.32
ECHDC1-212ENST00000461239 PITX2Q99697 317 aa6.79□□□□□ -1.32
ECHDC1-212ENST00000461239 COQ7Q99807 217 aa6.79□□□□□ -1.32
ECHDC1-212ENST00000461239 KCNS3Q9BQ31 491 aa6.79□□□□□ -1.32
ECHDC1-212ENST00000461239 C1orf198Q9H425 327 aa6.79□□□□□ -1.32
ECHDC1-212ENST00000461239 CDH20Q9HBT6 801 aa6.79□□□□□ -1.32
ECHDC1-212ENST00000461239 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.79□□□□□ -1.32
ECHDC1-212ENST00000461239 CBLN4Q9NTU7 201 aa6.79□□□□□ -1.32
ECHDC1-212ENST00000461239 DDX28Q9NUL7 540 aaKnown RBP6.79□□□□□ -1.32
ECHDC1-212ENST00000461239 KCNG2Q9UJ96 466 aa6.79□□□□□ -1.32
ECHDC1-212ENST00000461239 STARD10Q9Y365 291 aa6.79□□□□□ -1.32
ECHDC1-212ENST00000461239 CMAHPQ9Y471 501 aa6.79□□□□□ -1.32
ECHDC1-212ENST00000461239 IGLV3-9A0A075B6K5 115 aa6.78□□□□□ -1.32
ECHDC1-212ENST00000461239 LY6HO94772 140 aa6.78□□□□□ -1.32
ECHDC1-212ENST00000461239 PTHP01270 115 aa6.78□□□□□ -1.32
ECHDC1-212ENST00000461239 IGHV4-39P01824 125 aa6.78□□□□□ -1.32
ECHDC1-212ENST00000461239 ACSM4P0C7M7 580 aa6.78□□□□□ -1.32
ECHDC1-212ENST00000461239 ZNF823P16415 610 aa6.78□□□□□ -1.32
ECHDC1-212ENST00000461239 OTX1P32242 354 aaPredicted RBP6.78□□□□□ -1.32
ECHDC1-212ENST00000461239 MPV17P39210 176 aa6.78□□□□□ -1.32
ECHDC1-212ENST00000461239 COMPP49747 757 aaPredicted RBP6.78□□□□□ -1.32
ECHDC1-212ENST00000461239 ART1P52961 327 aa6.78□□□□□ -1.32
ECHDC1-212ENST00000461239 PPP5CP53041 499 aa6.78□□□□□ -1.32
ECHDC1-212ENST00000461239 SELENOVP59797 346 aa6.78□□□□□ -1.32
ECHDC1-212ENST00000461239 GGTLC2Q14390 218 aa6.78□□□□□ -1.32
ECHDC1-212ENST00000461239 TRIP10Q15642 601 aa6.78□□□□□ -1.32
ECHDC1-212ENST00000461239 ALKBH6Q3KRA9 238 aa6.78□□□□□ -1.32
ECHDC1-212ENST00000461239 SLC35D3Q5M8T2 416 aa6.78□□□□□ -1.32
ECHDC1-212ENST00000461239 SPATA46Q5T0L3 261 aa6.78□□□□□ -1.32
ECHDC1-212ENST00000461239 C10orf25Q5T742 122 aa6.78□□□□□ -1.32
ECHDC1-212ENST00000461239 AGAP6Q5VW22 663 aa6.78□□□□□ -1.32
ECHDC1-212ENST00000461239 NXNL2Q5VZ03 156 aa6.78□□□□□ -1.32
ECHDC1-212ENST00000461239 MEPCEQ7L2J0 689 aaKnown RBP6.78□□□□□ -1.32
ECHDC1-212ENST00000461239 ERI1Q8IV48 349 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms