RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 CD3GP09693 182 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 ANXA3P12429 323 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 NCK1P16333 377 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 TNFRSF1BP20333 461 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 G0S2P27469 103 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 IL12BP29460 328 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 DDTP30046 118 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 S100A11P31949 105 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 MAGEA5P43359 124 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 RFX2P48378 723 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 COMPP49747 757 aaPredicted RBP4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 NUDT2P50583 147 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 GZMMP51124 257 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 GAS1P54826 345 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 CLDN20P56880 219 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 PRPS1P60891 318 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 RAP1AP62834 184 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 DHODHQ02127 395 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 KLRB1Q12918 225 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 CEACAM7Q14002 265 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 TWIST1Q15672 202 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 SNAPC1Q16533 368 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 DECR1Q16698 335 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 TIMM50Q3ZCQ8 353 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 DCST1Q5T197 706 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 DCST2Q5T1A1 773 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 SLC22A10Q63ZE4 541 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 HAGHLQ6PII5 290 aaPredicted RBP4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 TRAT1Q6PIZ9 186 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 OPN5Q6U736 354 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 CBLN3Q6UW01 205 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 PET117Q6UWS5 81 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 DEF8Q6ZN54 512 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 FRRS1Q6ZNA5 592 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 BHLHA15Q7RTS1 189 aaPredicted RBP4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 IFNEQ86WN2 208 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 PTOV1Q86YD1 416 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 SNX29P2Q8IUI4 249 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 GCNT2Q8N0V5 402 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 CBR4Q8N4T8 237 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 ARRDC1Q8N5I2 433 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 TMEM251Q8N6I4 163 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 CDRT4Q8N9R6 151 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 SYT14Q8NB59 555 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 FAM83FQ8NEG4 500 aaPredicted RBP4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 OR2T4Q8NH00 348 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 OR5J2Q8NH18 312 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 TMEM163Q8TC26 289 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 FAM110BQ8TC76 370 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 SLC38A5Q8WUX1 472 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 ACOT11Q8WXI4 607 aaPredicted RBP4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 SLC38A4Q969I6 547 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 PNPLA2Q96AD5 504 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 ROPN1LQ96C74 230 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 TMEM19Q96HH6 336 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 FAM210BQ96KR6 192 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 NOL4LQ96MY1 436 aaPredicted RBP4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 SLC38A2Q96QD8 506 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 SDF2Q99470 211 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 THUMPD3Q9BV44 507 aaKnown RBP4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 GGACTQ9BVM4 153 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 POLDIP3Q9BY77 421 aaKnown RBP4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 TTTY12Q9BZ98 90 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 EGLN1Q9GZT9 426 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 SLC38A1Q9H2H9 487 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 MAGIXQ9H6Y5 334 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 PPP1R3EQ9H7J1 279 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 METTL7AQ9H8H3 244 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 CACYBPQ9HB71 228 aaKnown RBP4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 ZFP57Q9NU63 452 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 TAS2R3Q9NYW6 316 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 KLRF1Q9NZS2 232 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 SPRR3Q9UBC9 169 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 CLEC2DQ9UHP7 191 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 LEF1Q9UJU2 399 aaPredicted RBP4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 FBN1P35555 2871 aaKnown RBP4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 TMEM218A2RU14 115 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 GAGE12JA6NER3 117 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 C1orf196B1AJZ1 125 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 ZNF814B7Z6K7 855 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 NPIPB9F8W1W9 429 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 M0QZ24 198 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 LRRTM2O43300 516 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 TRAPPC6AO75865 159 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 GATBO75879 557 aaKnown RBP4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 DIRAS3O95661 229 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 EPPINO95925 133 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 P04436 131 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 IGFBP1P08833 259 aaPredicted RBP4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 CSF3P09919 207 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 GKN3PP0CG01 181 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 STAG3L3P0CL85 134 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 HIST1H1BP16401 226 aaKnown RBP4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 KLK2P20151 261 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 CNR1P21554 472 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 GNLYP22749 145 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 GABRR1P24046 479 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 GTF2E2P29084 291 aaKnown RBP4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 SHC1P29353 583 aa4.18□□□□□ -1.74
ATPAF1-203ENST00000460928 POLR2IP36954 125 aaKnown RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 193.1 ms