RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 TRIP11Q15643 1979 aa2.18□□□□□ -2.06
HPS3-203ENST00000460822 XIRP1Q702N8 1843 aaKnown RBP2.17□□□□□ -2.06
HPS3-203ENST00000460822 MGAMO43451 1857 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 ZNF638Q14966 1978 aaKnown RBP2.17□□□□□ -2.06
HPS3-203ENST00000460822 QSER1Q2KHR3 1735 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 COL2A1P02458 1487 aaPredicted RBP2.17□□□□□ -2.06
HPS3-203ENST00000460822 STRCQ7RTU9 1775 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 SIP14410 1827 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 A0A1B0GVI7 797 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 FUOMA2VDF0 154 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 TVP23AA6NH52 213 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 NCBP2LA6PVI3 153 aaKnown RBP2.17□□□□□ -2.06
HPS3-203ENST00000460822 I3L4J1 428 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 GABRPO00591 440 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 NME4O00746 187 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 PROSCO94903 275 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 HOXC4P09017 264 aaPredicted RBP2.17□□□□□ -2.06
HPS3-203ENST00000460822 GIG44P09565 113 aaPredicted RBP2.17□□□□□ -2.06
HPS3-203ENST00000460822 PSMB1P20618 241 aaKnown RBP2.17□□□□□ -2.06
HPS3-203ENST00000460822 PSMB6P28072 239 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 CD40LGP29965 261 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 P2RY2P41231 377 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 GCLMP48507 274 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 CDK9P50750 372 aaKnown RBP2.17□□□□□ -2.06
HPS3-203ENST00000460822 AQP5P55064 265 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 UBE2G2P60604 165 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 UBE2KP61086 200 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 NUTF2P61970 127 aaKnown RBP2.17□□□□□ -2.06
HPS3-203ENST00000460822 PAFAH1B2P68402 229 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 SLAMF1Q13291 335 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 UNC119Q13432 240 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 PIGHQ14442 188 aaPredicted RBP2.17□□□□□ -2.06
HPS3-203ENST00000460822 CLINT1Q14677 625 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 C16orf72Q14CZ0 275 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 MAPRE2Q15555 327 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 KYAT1Q16773 422 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 C15orf32Q32M92 178 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 FHL5Q5TD97 284 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 ANKRD22Q5VYY1 191 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 LCN12Q6JVE5 192 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 CD300LGQ6UXG3 332 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 WDR82Q6UXN9 313 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 ZNF720Q7Z2F6 126 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 HORMAD1Q86X24 394 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 NKAIN4Q8IVV8 208 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 ARRDC1Q8N5I2 433 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 ZFP41Q8N8Y5 198 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 CDRT4Q8N9R6 151 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 WDR31Q8NA23 367 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 OR6K6Q8NGW6 343 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 ERMNQ8TAM6 284 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 APH1BQ8WW43 257 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 CNBD2Q96M20 576 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 SERPINB11Q96P15 392 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 SCGB3A2Q96PL1 93 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 MICU1Q9BPX6 476 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 CALN1Q9BXU9 219 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 C20orf27Q9GZN8 174 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 DEFB127Q9H1M4 99 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 Q9H521 79 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 RPF2Q9H7B2 306 aaKnown RBP2.17□□□□□ -2.06
HPS3-203ENST00000460822 UGT1A7Q9HAW7 530 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 UGT1A8Q9HAW9 530 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 PLGRKTQ9HBL7 147 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 CLCF1Q9UBD9 225 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 MARCOQ9UEW3 520 aaPredicted RBP2.17□□□□□ -2.06
HPS3-203ENST00000460822 PSMD13Q9UNM6 376 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 VSIG4Q9Y279 399 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 FAM32AQ9Y421 112 aaKnown RBP2.17□□□□□ -2.06
HPS3-203ENST00000460822 FADS3Q9Y5Q0 445 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 URGCP-MRPS24S4R325 110 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 BPTFQ12830 3046 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 PCM1Q15154 2024 aa2.17□□□□□ -2.06
HPS3-203ENST00000460822 DOCK5Q9H7D0 1870 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 A0A0A6YYD5 115 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 A0A0B4J2A0 478 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 IGKV6D-41A0A0C4DH26 115 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 C1orf232A0A0U1RR37 186 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 GOLGA8MH3BSY2 632 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 COPEO14579 308 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 TOR1AO14656 332 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 FAM189A1O60320 539 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 CRLF1O75462 422 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 SRP72O76094 671 aaKnown RBP2.16□□□□□ -2.06
HPS3-203ENST00000460822 GCGP01275 180 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 HSPB1P04792 205 aaKnown RBP2.16□□□□□ -2.06
HPS3-203ENST00000460822 GLAP06280 429 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 TFPTP0C1Z6 253 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 P0C879 139 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 OCM2P0CE71 109 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 OCMP0CE72 109 aaPredicted RBP2.16□□□□□ -2.06
HPS3-203ENST00000460822 THRAP10827 490 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 GFAPP14136 432 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 AK4P27144 223 aaPredicted RBP2.16□□□□□ -2.06
HPS3-203ENST00000460822 ARR3P36575 388 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 HSPA13P48723 471 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 APOC4P55056 127 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 NUP107P57740 925 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 MYL6P60660 151 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 MXD1Q05195 221 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms