RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 CCL15-CCL14A0A0B4J2E2 113 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 SRSF10O75494 262 aaKnown RBP3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 IGKV1D-33P01593 117 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 IGKV1-33P01594 117 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 CD2P06729 351 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 SRP19P09132 144 aaKnown RBP3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 CSF1P09603 554 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 CISD3P0C7P0 127 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 OR5H8P0DN80 308 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 EGR1P18146 543 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 RAB4AP20338 218 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 FUT3P21217 361 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 RPL29P47914 159 aaKnown RBP3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 COL10A1Q03692 680 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 HNF4GQ14541 408 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 CCL15Q16663 113 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 PRAMEF17Q5VTA0 474 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 METRNLQ641Q3 311 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 C16orf47Q6ZP98 133 aaPredicted RBP3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 APOBEC3FQ8IUX4 373 aaKnown RBP3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 RLN3Q8WXF3 142 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 C8orf44Q96CB5 159 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 IGSF21Q96ID5 467 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 PACRGQ96M98 296 aaPredicted RBP3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 AURKAIP1Q9NWT8 199 aaPredicted RBP3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 KLHL13Q9P2N7 655 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 ARHGAP32A7KAX9 2087 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 FIGNL2A6NMB9 653 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 GRXCR1A8MXD5 290 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 M0R036 132 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 SEMA4FO95754 770 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 C8AP07357 584 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 CFPP27918 469 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 DRD3P35462 400 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 OR3A2P47893 321 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 RNF4P78317 190 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 ENPP2Q13822 863 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 RSPO1Q2MKA7 263 aaPredicted RBP3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 GAB4Q2WGN9 574 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 CDNFQ49AH0 187 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 AGBL4Q5VU57 503 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 OR5AS1Q8N127 324 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 ZNF676Q8N7Q3 588 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 NOXO1Q8NFA2 376 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 ADAMTS15Q8TE58 950 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 ADGRG7Q96K78 797 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 OR2A5Q96R48 311 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 NUDT9Q9BW91 350 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 CNTNAP3Q9BZ76 1288 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 MTHFD2LQ9H903 347 aaPredicted RBP3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 GPN1Q9HCN4 374 aaPredicted RBP3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 STARD5Q9NSY2 213 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 CALML5Q9NZT1 146 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 IKZF2Q9UKS7 526 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 HIF3AQ9Y2N7 669 aa3.98□□□□□ -1.77
DEPDC1-202ENST00000456315 LOC100289279A0A1B0GTE1 492 aa3.97□□□□□ -1.77
DEPDC1-202ENST00000456315 PGPEP1LA6NFU8 196 aa3.97□□□□□ -1.77
DEPDC1-202ENST00000456315 SCAF4O95104 1147 aaKnown RBP3.97□□□□□ -1.77
DEPDC1-202ENST00000456315 OR2C1O95371 312 aa3.97□□□□□ -1.77
DEPDC1-202ENST00000456315 TPT1P13693 172 aaKnown RBP3.97□□□□□ -1.77
DEPDC1-202ENST00000456315 PPM1AP35813 382 aa3.97□□□□□ -1.77
DEPDC1-202ENST00000456315 RNASE10Q5GAN6 216 aaKnown RBP3.97□□□□□ -1.77
DEPDC1-202ENST00000456315 ASPHD1Q5U4P2 390 aa3.97□□□□□ -1.77
DEPDC1-202ENST00000456315 OR2T2Q6IF00 324 aa3.97□□□□□ -1.77
DEPDC1-202ENST00000456315 C16orf54Q6UWD8 224 aa3.97□□□□□ -1.77
DEPDC1-202ENST00000456315 ZNF627Q7L945 461 aa3.97□□□□□ -1.77
DEPDC1-202ENST00000456315 PEG10Q86TG7 708 aaKnown RBP3.97□□□□□ -1.77
DEPDC1-202ENST00000456315 D2HGDHQ8N465 521 aa3.97□□□□□ -1.77
DEPDC1-202ENST00000456315 ZNF321PQ8N8H1 164 aa3.97□□□□□ -1.77
DEPDC1-202ENST00000456315 COX18Q8N8Q8 333 aa3.97□□□□□ -1.77
DEPDC1-202ENST00000456315 OR5AK2Q8NH90 309 aa3.97□□□□□ -1.77
DEPDC1-202ENST00000456315 TERB2Q8NHR7 220 aa3.97□□□□□ -1.77
DEPDC1-202ENST00000456315 HHIPL1Q96JK4 782 aa3.97□□□□□ -1.77
DEPDC1-202ENST00000456315 CNN2Q99439 309 aaKnown RBP3.97□□□□□ -1.77
DEPDC1-202ENST00000456315 ABHD6Q9BV23 337 aa3.97□□□□□ -1.77
DEPDC1-202ENST00000456315 REPIN1Q9BWE0 567 aaKnown RBP3.97□□□□□ -1.77
DEPDC1-202ENST00000456315 RBM24Q9BX46 236 aaKnown RBP3.97□□□□□ -1.77
DEPDC1-202ENST00000456315 TEX12Q9BXU0 123 aa3.97□□□□□ -1.77
DEPDC1-202ENST00000456315 GFOD1Q9NXC2 390 aa3.97□□□□□ -1.77
DEPDC1-202ENST00000456315 CKLFQ9UBR5 152 aa3.97□□□□□ -1.77
DEPDC1-202ENST00000456315 MED31Q9Y3C7 131 aa3.97□□□□□ -1.77
DEPDC1-202ENST00000456315 ELOA3DA6NLF2 546 aaPredicted RBP3.97□□□□□ -1.77
DEPDC1-202ENST00000456315 C2orf74A8MZ97 194 aa3.97□□□□□ -1.77
DEPDC1-202ENST00000456315 J3QW42 95 aa3.97□□□□□ -1.77
DEPDC1-202ENST00000456315 CYB5AP00167 134 aa3.97□□□□□ -1.77
DEPDC1-202ENST00000456315 SPINK2P20155 84 aa3.97□□□□□ -1.77
DEPDC1-202ENST00000456315 RRADP55042 308 aa3.97□□□□□ -1.77
DEPDC1-202ENST00000456315 RPL18Q07020 188 aaKnown RBP3.97□□□□□ -1.77
DEPDC1-202ENST00000456315 USF2Q15853 346 aaPredicted RBP3.97□□□□□ -1.77
DEPDC1-202ENST00000456315 ZNF726P1Q15940 193 aa3.97□□□□□ -1.77
DEPDC1-202ENST00000456315 ELOA3BQ3SY89 546 aa3.97□□□□□ -1.77
DEPDC1-202ENST00000456315 C14orf28Q4W4Y0 310 aa3.97□□□□□ -1.77
DEPDC1-202ENST00000456315 FBXO46Q6PJ61 603 aaPredicted RBP3.97□□□□□ -1.77
DEPDC1-202ENST00000456315 IL34Q6ZMJ4 242 aa3.97□□□□□ -1.77
DEPDC1-202ENST00000456315 CDC20BQ86Y33 519 aa3.97□□□□□ -1.77
DEPDC1-202ENST00000456315 LINC00346Q8IVM7 164 aa3.97□□□□□ -1.77
DEPDC1-202ENST00000456315 SLC35G3Q8N808 338 aa3.97□□□□□ -1.77
DEPDC1-202ENST00000456315 ELOA3Q8NG57 546 aa3.97□□□□□ -1.77
DEPDC1-202ENST00000456315 OR52E1Q8NGJ3 308 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms