RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 FRRS1LQ9P0K9 344 aa11.85□□□□□ -0.51
HDAC4-205ENST00000454542 LRCH1Q9Y2L9 728 aa11.85□□□□□ -0.51
HDAC4-205ENST00000454542 A0A1B0GVI7 797 aa11.84□□□□□ -0.51
HDAC4-205ENST00000454542 IRGMA1A4Y4 181 aa11.84□□□□□ -0.51
HDAC4-205ENST00000454542 OOEPA6NGQ2 149 aa11.84□□□□□ -0.51
HDAC4-205ENST00000454542 OR4C45A6NMZ5 311 aa11.84□□□□□ -0.51
HDAC4-205ENST00000454542 FOXH1O75593 365 aa11.84□□□□□ -0.51
HDAC4-205ENST00000454542 ZNF205O95201 554 aa11.84□□□□□ -0.51
HDAC4-205ENST00000454542 WNT2P09544 360 aa11.84□□□□□ -0.51
HDAC4-205ENST00000454542 ZFP36P26651 326 aaKnown RBP11.84□□□□□ -0.51
HDAC4-205ENST00000454542 DCKP27707 260 aa11.84□□□□□ -0.51
HDAC4-205ENST00000454542 CD80P33681 288 aa11.84□□□□□ -0.51
HDAC4-205ENST00000454542 AQP4P55087 323 aa11.84□□□□□ -0.51
HDAC4-205ENST00000454542 CHRFAM7AQ494W8 412 aa11.84□□□□□ -0.51
HDAC4-205ENST00000454542 CLVS2Q5SYC1 327 aa11.84□□□□□ -0.51
HDAC4-205ENST00000454542 FAM120AOSQ5T036 256 aa11.84□□□□□ -0.51
HDAC4-205ENST00000454542 THAP5Q7Z6K1 395 aa11.84□□□□□ -0.51
HDAC4-205ENST00000454542 LHFPL3Q86UP9 236 aa11.84□□□□□ -0.51
HDAC4-205ENST00000454542 OR5A2Q8NGI9 324 aa11.84□□□□□ -0.51
HDAC4-205ENST00000454542 HAVCR2Q8TDQ0 301 aa11.84□□□□□ -0.51
HDAC4-205ENST00000454542 C10orf35Q96D05 121 aa11.84□□□□□ -0.51
HDAC4-205ENST00000454542 CHST5Q9GZS9 411 aa11.84□□□□□ -0.51
HDAC4-205ENST00000454542 OR51I2Q9H344 312 aa11.84□□□□□ -0.51
HDAC4-205ENST00000454542 ISG20L2Q9H9L3 353 aaKnown RBP11.84□□□□□ -0.51
HDAC4-205ENST00000454542 LPAR2Q9HBW0 351 aa11.84□□□□□ -0.51
HDAC4-205ENST00000454542 TRIM36Q9NQ86 728 aa11.84□□□□□ -0.51
HDAC4-205ENST00000454542 MIOXQ9UGB7 285 aa11.84□□□□□ -0.51
HDAC4-205ENST00000454542 DIMT1Q9UNQ2 313 aaKnown RBP11.84□□□□□ -0.51
HDAC4-205ENST00000454542 J3QLW9 94 aa11.83□□□□□ -0.52
HDAC4-205ENST00000454542 CDIPTO14735 213 aa11.83□□□□□ -0.52
HDAC4-205ENST00000454542 SYT7O43581 403 aa11.83□□□□□ -0.52
HDAC4-205ENST00000454542 NRASP01111 189 aa11.83□□□□□ -0.52
HDAC4-205ENST00000454542 HTR1AP08908 422 aa11.83□□□□□ -0.52
HDAC4-205ENST00000454542 FAM157CP0CG43 387 aa11.83□□□□□ -0.52
HDAC4-205ENST00000454542 RPS2P15880 293 aaKnown RBP11.83□□□□□ -0.52
HDAC4-205ENST00000454542 ZNF19P17023 458 aa11.83□□□□□ -0.52
HDAC4-205ENST00000454542 TGM4P49221 684 aa11.83□□□□□ -0.52
HDAC4-205ENST00000454542 GPM6AP51674 278 aa11.83□□□□□ -0.52
HDAC4-205ENST00000454542 PAX2Q02962 417 aa11.83□□□□□ -0.52
HDAC4-205ENST00000454542 RIPK1Q13546 671 aa11.83□□□□□ -0.52
HDAC4-205ENST00000454542 ALKBH1Q13686 389 aaKnown RBP11.83□□□□□ -0.52
HDAC4-205ENST00000454542 CEP78Q5JTW2 689 aa11.83□□□□□ -0.52
HDAC4-205ENST00000454542 TMEM244Q5VVB8 128 aa11.83□□□□□ -0.52
HDAC4-205ENST00000454542 PLCXD3Q63HM9 321 aa11.83□□□□□ -0.52
HDAC4-205ENST00000454542 ZNF841Q6ZN19 808 aa11.83□□□□□ -0.52
HDAC4-205ENST00000454542 FAM90A1Q86YD7 464 aa11.83□□□□□ -0.52
HDAC4-205ENST00000454542 SCCPDHQ8NBX0 429 aa11.83□□□□□ -0.52
HDAC4-205ENST00000454542 LRRC29Q8WV35 223 aa11.83□□□□□ -0.52
HDAC4-205ENST00000454542 RPL3LQ92901 407 aaKnown RBP11.83□□□□□ -0.52
HDAC4-205ENST00000454542 NEIL1Q96FI4 390 aaPredicted RBP11.83□□□□□ -0.52
HDAC4-205ENST00000454542 RNF170Q96K19 258 aa11.83□□□□□ -0.52
HDAC4-205ENST00000454542 TMPRSS13Q9BYE2 586 aa11.83□□□□□ -0.52
HDAC4-205ENST00000454542 METTL17Q9H7H0 456 aaPredicted RBP11.83□□□□□ -0.52
HDAC4-205ENST00000454542 PLCXD1Q9NUJ7 323 aa11.83□□□□□ -0.52
HDAC4-205ENST00000454542 FKBP14Q9NWM8 211 aa11.83□□□□□ -0.52
HDAC4-205ENST00000454542 CNOT2Q9NZN8 540 aaKnown RBP11.83□□□□□ -0.52
HDAC4-205ENST00000454542 CTSZQ9UBR2 303 aa11.83□□□□□ -0.52
HDAC4-205ENST00000454542 TRAV38-1A0A0B4J264 116 aa11.82□□□□□ -0.52
HDAC4-205ENST00000454542 hCG_1807616A0A1W2PRN6 198 aa11.82□□□□□ -0.52
HDAC4-205ENST00000454542 PQLC2LA1A4F0 135 aa11.82□□□□□ -0.52
HDAC4-205ENST00000454542 ANKRD61A6NGH8 418 aa11.82□□□□□ -0.52
HDAC4-205ENST00000454542 ZNF732B4DXR9 585 aa11.82□□□□□ -0.52
HDAC4-205ENST00000454542 J3QLI3 93 aa11.82□□□□□ -0.52
HDAC4-205ENST00000454542 ZNF12P17014 697 aa11.82□□□□□ -0.52
HDAC4-205ENST00000454542 GATA3P23771 443 aa11.82□□□□□ -0.52
HDAC4-205ENST00000454542 MPZP25189 248 aa11.82□□□□□ -0.52
HDAC4-205ENST00000454542 KCNJ8Q15842 424 aa11.82□□□□□ -0.52
HDAC4-205ENST00000454542 ODF4Q2M2E3 257 aa11.82□□□□□ -0.52
HDAC4-205ENST00000454542 ESCO2Q56NI9 601 aa11.82□□□□□ -0.52
HDAC4-205ENST00000454542 STUMQ69YW2 141 aa11.82□□□□□ -0.52
HDAC4-205ENST00000454542 LYPD2Q6UXB3 125 aa11.82□□□□□ -0.52
HDAC4-205ENST00000454542 ZNF771Q7L3S4 317 aaPredicted RBP11.82□□□□□ -0.52
HDAC4-205ENST00000454542 PRIMA1Q86XR5 153 aa11.82□□□□□ -0.52
HDAC4-205ENST00000454542 ZNF485Q8NCK3 441 aa11.82□□□□□ -0.52
HDAC4-205ENST00000454542 C19orf18Q8NEA5 215 aa11.82□□□□□ -0.52
HDAC4-205ENST00000454542 C12orf43Q96C57 262 aaKnown RBP11.82□□□□□ -0.52
HDAC4-205ENST00000454542 TECTBQ96PL2 329 aa11.82□□□□□ -0.52
HDAC4-205ENST00000454542 SHARPINQ9H0F6 387 aa11.82□□□□□ -0.52
HDAC4-205ENST00000454542 PLEKHA1Q9HB21 404 aa11.82□□□□□ -0.52
HDAC4-205ENST00000454542 GPR173Q9NS66 373 aa11.82□□□□□ -0.52
HDAC4-205ENST00000454542 KAAG1Q9UBP8 84 aa11.82□□□□□ -0.52
HDAC4-205ENST00000454542 PCDHB10Q9UN67 800 aa11.82□□□□□ -0.52
HDAC4-205ENST00000454542 CAB39Q9Y376 341 aaPredicted RBP11.82□□□□□ -0.52
HDAC4-205ENST00000454542 EXOSC1Q9Y3B2 195 aaKnown RBP11.82□□□□□ -0.52
HDAC4-205ENST00000454542 A0A0G2JMP0 313 aa11.81□□□□□ -0.52
HDAC4-205ENST00000454542 A0A0X1KG70 313 aa11.81□□□□□ -0.52
HDAC4-205ENST00000454542 E9PI62 339 aa11.81□□□□□ -0.52
HDAC4-205ENST00000454542 C3orf80F5H4A9 247 aa11.81□□□□□ -0.52
HDAC4-205ENST00000454542 NDUFA2O43678 99 aa11.81□□□□□ -0.52
HDAC4-205ENST00000454542 FCN3O75636 299 aa11.81□□□□□ -0.52
HDAC4-205ENST00000454542 MUC1P15941 1255 aaPredicted RBP11.81□□□□□ -0.52
HDAC4-205ENST00000454542 HNF1AP20823 631 aa11.81□□□□□ -0.52
HDAC4-205ENST00000454542 PITPNBP48739 271 aa11.81□□□□□ -0.52
HDAC4-205ENST00000454542 ETV1P50549 477 aa11.81□□□□□ -0.52
HDAC4-205ENST00000454542 LCN2P80188 198 aa11.81□□□□□ -0.52
HDAC4-205ENST00000454542 C1orf229Q6ZS94 237 aaPredicted RBP11.81□□□□□ -0.52
HDAC4-205ENST00000454542 IL17RELQ6ZVW7 336 aa11.81□□□□□ -0.52
HDAC4-205ENST00000454542 MOB3CQ70IA8 216 aa11.81□□□□□ -0.52
HDAC4-205ENST00000454542 UTS2BQ765I0 119 aa11.81□□□□□ -0.52
HDAC4-205ENST00000454542 RDH10Q8IZV5 341 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms