RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 CLEC2DQ9UHP7 191 aa7.38□□□□□ -1.23
COL28A1-205ENST00000453441 PIGLQ9Y2B2 252 aa7.38□□□□□ -1.23
COL28A1-205ENST00000453441 TANC2Q9HCD6 1990 aa7.38□□□□□ -1.23
COL28A1-205ENST00000453441 ANKRD61A6NGH8 418 aa7.37□□□□□ -1.23
COL28A1-205ENST00000453441 CLDN25C9JDP6 229 aa7.37□□□□□ -1.23
COL28A1-205ENST00000453441 PLPP2O43688 288 aa7.37□□□□□ -1.23
COL28A1-205ENST00000453441 NDUFS7O75251 213 aa7.37□□□□□ -1.23
COL28A1-205ENST00000453441 NCR1O76036 304 aa7.37□□□□□ -1.23
COL28A1-205ENST00000453441 ZFPL1O95159 310 aa7.37□□□□□ -1.23
COL28A1-205ENST00000453441 TNFAIP8O95379 198 aa7.37□□□□□ -1.23
COL28A1-205ENST00000453441 HPXP02790 462 aa7.37□□□□□ -1.23
COL28A1-205ENST00000453441 MT-ND2P03891 347 aa7.37□□□□□ -1.23
COL28A1-205ENST00000453441 IRF2P14316 349 aa7.37□□□□□ -1.23
COL28A1-205ENST00000453441 ZNF20P17024 532 aa7.37□□□□□ -1.23
COL28A1-205ENST00000453441 ANOS1P23352 680 aa7.37□□□□□ -1.23
COL28A1-205ENST00000453441 ACKR3P25106 362 aa7.37□□□□□ -1.23
COL28A1-205ENST00000453441 PSMA1P25786 263 aaKnown RBP7.37□□□□□ -1.23
COL28A1-205ENST00000453441 GNG3P63215 75 aa7.37□□□□□ -1.23
COL28A1-205ENST00000453441 TNK1Q13470 666 aa7.37□□□□□ -1.23
COL28A1-205ENST00000453441 CNN3Q15417 329 aaKnown RBP7.37□□□□□ -1.23
COL28A1-205ENST00000453441 TRAM1Q15629 374 aa7.37□□□□□ -1.23
COL28A1-205ENST00000453441 CEACAM21Q3KPI0 293 aa7.37□□□□□ -1.23
COL28A1-205ENST00000453441 UTS2BQ765I0 119 aa7.37□□□□□ -1.23
COL28A1-205ENST00000453441 ZNF367Q7RTV3 350 aa7.37□□□□□ -1.23
COL28A1-205ENST00000453441 KRTAP1-3Q8IUG1 177 aa7.37□□□□□ -1.23
COL28A1-205ENST00000453441 ZCCHC24Q8N2G6 241 aaKnown RBP7.37□□□□□ -1.23
COL28A1-205ENST00000453441 MS4A15Q8N5U1 240 aa7.37□□□□□ -1.23
COL28A1-205ENST00000453441 DNAAF1Q8NEP3 725 aa7.37□□□□□ -1.23
COL28A1-205ENST00000453441 OR10AD1Q8NGE0 317 aa7.37□□□□□ -1.23
COL28A1-205ENST00000453441 C10orf105Q8TEF2 133 aa7.37□□□□□ -1.23
COL28A1-205ENST00000453441 ITLN1Q8WWA0 313 aa7.37□□□□□ -1.23
COL28A1-205ENST00000453441 GATAD2BQ8WXI9 593 aa7.37□□□□□ -1.23
COL28A1-205ENST00000453441 OR5P3Q8WZ94 311 aa7.37□□□□□ -1.23
COL28A1-205ENST00000453441 PIGCQ92535 297 aa7.37□□□□□ -1.23
COL28A1-205ENST00000453441 RAB1CQ92928 201 aa7.37□□□□□ -1.23
COL28A1-205ENST00000453441 SPSB1Q96BD6 273 aa7.37□□□□□ -1.23
COL28A1-205ENST00000453441 CPNE2Q96FN4 548 aaPredicted RBP7.37□□□□□ -1.23
COL28A1-205ENST00000453441 ZNF275Q9NSD4 429 aaPredicted RBP7.37□□□□□ -1.23
COL28A1-205ENST00000453441 ITGB1BP2Q9UKP3 347 aa7.37□□□□□ -1.23
COL28A1-205ENST00000453441 SLC7A11Q9UPY5 501 aa7.37□□□□□ -1.23
COL28A1-205ENST00000453441 DHDHQ9UQ10 334 aa7.37□□□□□ -1.23
COL28A1-205ENST00000453441 PPP1R3CQ9UQK1 317 aa7.37□□□□□ -1.23
COL28A1-205ENST00000453441 ZNF281Q9Y2X9 895 aa7.37□□□□□ -1.23
COL28A1-205ENST00000453441 LSM2Q9Y333 95 aaKnown RBP7.37□□□□□ -1.23
COL28A1-205ENST00000453441 RHBDD3Q9Y3P4 386 aa7.37□□□□□ -1.23
COL28A1-205ENST00000453441 CSMD2Q7Z408 3487 aa7.37□□□□□ -1.23
COL28A1-205ENST00000453441 ITPR3Q14573 2671 aa7.36□□□□□ -1.23
COL28A1-205ENST00000453441 CSMD1Q96PZ7 3565 aa7.36□□□□□ -1.23
COL28A1-205ENST00000453441 LRP5LA4QPB2 252 aa7.36□□□□□ -1.23
COL28A1-205ENST00000453441 TRIM64A6NGJ6 449 aa7.36□□□□□ -1.23
COL28A1-205ENST00000453441 ZNF850A8MQ14 1090 aa7.36□□□□□ -1.23
COL28A1-205ENST00000453441 E9PI62 339 aa7.36□□□□□ -1.23
COL28A1-205ENST00000453441 F5H5P2 479 aa7.36□□□□□ -1.23
COL28A1-205ENST00000453441 RP2O75695 350 aa7.36□□□□□ -1.23
COL28A1-205ENST00000453441 NRASP01111 189 aa7.36□□□□□ -1.23
COL28A1-205ENST00000453441 HLA-DPB1P04440 258 aa7.36□□□□□ -1.23
COL28A1-205ENST00000453441 HEXAP06865 529 aa7.36□□□□□ -1.23
COL28A1-205ENST00000453441 FAHP16930 419 aa7.36□□□□□ -1.23
COL28A1-205ENST00000453441 PRKACBP22694 351 aa7.36□□□□□ -1.23
COL28A1-205ENST00000453441 MAPK3P27361 379 aaPredicted RBP7.36□□□□□ -1.23
COL28A1-205ENST00000453441 CFHR2P36980 270 aa7.36□□□□□ -1.23
COL28A1-205ENST00000453441 CHN2P52757 468 aa7.36□□□□□ -1.23
COL28A1-205ENST00000453441 MLLT11Q13015 90 aaPredicted RBP7.36□□□□□ -1.23
COL28A1-205ENST00000453441 RIN1Q13671 783 aa7.36□□□□□ -1.23
COL28A1-205ENST00000453441 MED22Q15528 200 aa7.36□□□□□ -1.23
COL28A1-205ENST00000453441 KCNJ8Q15842 424 aa7.36□□□□□ -1.23
COL28A1-205ENST00000453441 ODF4Q2M2E3 257 aa7.36□□□□□ -1.23
COL28A1-205ENST00000453441 FAM76BQ5HYJ3 339 aa7.36□□□□□ -1.23
COL28A1-205ENST00000453441 PLCXD3Q63HM9 321 aa7.36□□□□□ -1.23
COL28A1-205ENST00000453441 ZNF773Q6PK81 442 aa7.36□□□□□ -1.23
COL28A1-205ENST00000453441 ZNF573Q86YE8 665 aa7.36□□□□□ -1.23
COL28A1-205ENST00000453441 TGIF2LYQ8IUE0 185 aa7.36□□□□□ -1.23
COL28A1-205ENST00000453441 SERPINA12Q8IW75 414 aa7.36□□□□□ -1.23
COL28A1-205ENST00000453441 PARP16Q8N5Y8 322 aa7.36□□□□□ -1.23
COL28A1-205ENST00000453441 ZNF525Q8N782 197 aa7.36□□□□□ -1.23
COL28A1-205ENST00000453441 OR5D14Q8NGL3 314 aa7.36□□□□□ -1.23
COL28A1-205ENST00000453441 OR13C3Q8NGS6 347 aa7.36□□□□□ -1.23
COL28A1-205ENST00000453441 OR10Z1Q8NGY1 313 aa7.36□□□□□ -1.23
COL28A1-205ENST00000453441 TSEN15Q8WW01 171 aaKnown RBP7.36□□□□□ -1.23
COL28A1-205ENST00000453441 GTF3AQ92664 365 aaKnown RBP7.36□□□□□ -1.23
COL28A1-205ENST00000453441 UFD1Q92890 307 aa7.36□□□□□ -1.23
COL28A1-205ENST00000453441 PPP1R14AQ96A00 147 aa7.36□□□□□ -1.23
COL28A1-205ENST00000453441 RNF170Q96K19 258 aa7.36□□□□□ -1.23
COL28A1-205ENST00000453441 Q96MF0 132 aa7.36□□□□□ -1.23
COL28A1-205ENST00000453441 TLNRD1Q9H1K6 362 aa7.36□□□□□ -1.23
COL28A1-205ENST00000453441 VCX3AQ9NNX9 186 aa7.36□□□□□ -1.23
COL28A1-205ENST00000453441 GCM1Q9NP62 436 aa7.36□□□□□ -1.23
COL28A1-205ENST00000453441 TMEM106BQ9NUM4 274 aa7.36□□□□□ -1.23
COL28A1-205ENST00000453441 POLDIP2Q9Y2S7 368 aa7.36□□□□□ -1.23
COL28A1-205ENST00000453441 DYSFO75923 2080 aa7.36□□□□□ -1.23
COL28A1-205ENST00000453441 AKAP9Q99996 3911 aa7.35□□□□□ -1.23
COL28A1-205ENST00000453441 VWC2LB2RUY7 222 aa7.35□□□□□ -1.23
COL28A1-205ENST00000453441 H0YL77 283 aa7.35□□□□□ -1.23
COL28A1-205ENST00000453441 LALBAP00709 142 aa7.35□□□□□ -1.23
COL28A1-205ENST00000453441 OCM2P0CE71 109 aa7.35□□□□□ -1.23
COL28A1-205ENST00000453441 OCMP0CE72 109 aaPredicted RBP7.35□□□□□ -1.23
COL28A1-205ENST00000453441 CELP19835 753 aa7.35□□□□□ -1.23
COL28A1-205ENST00000453441 NR4A2P43354 598 aa7.35□□□□□ -1.23
COL28A1-205ENST00000453441 GPR6P46095 362 aaPredicted RBP7.35□□□□□ -1.23
COL28A1-205ENST00000453441 FUT6P51993 359 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms