RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 LINC01387J3KSC0 135 aa10.25□□□□□ -0.77
VTA1-203ENST00000452973 SDCBPO00560 298 aaPredicted RBP10.25□□□□□ -0.77
VTA1-203ENST00000452973 CD74P04233 296 aa10.25□□□□□ -0.77
VTA1-203ENST00000452973 C6orf201Q7Z4U5 140 aa10.25□□□□□ -0.77
VTA1-203ENST00000452973 CCDC107Q8WV48 283 aa10.25□□□□□ -0.77
VTA1-203ENST00000452973 CITED4Q96RK1 184 aa10.25□□□□□ -0.77
VTA1-203ENST00000452973 ZNF701Q9NV72 531 aaPredicted RBP10.25□□□□□ -0.77
VTA1-203ENST00000452973 PARPBPQ9NWS1 579 aa10.25□□□□□ -0.77
VTA1-203ENST00000452973 NOP16Q9Y3C1 178 aaKnown RBP10.25□□□□□ -0.77
VTA1-203ENST00000452973 NPTNQ9Y639 398 aa10.25□□□□□ -0.77
VTA1-203ENST00000452973 ARID1AO14497 2285 aa10.25□□□□□ -0.77
VTA1-203ENST00000452973 C5orf49A4QMS7 147 aa10.25□□□□□ -0.77
VTA1-203ENST00000452973 OR14I1A6ND48 311 aa10.25□□□□□ -0.77
VTA1-203ENST00000452973 OR2AT4A6NND4 320 aa10.25□□□□□ -0.77
VTA1-203ENST00000452973 ZNF587BE7ETH6 402 aa10.25□□□□□ -0.77
VTA1-203ENST00000452973 CCSO14618 274 aa10.25□□□□□ -0.77
VTA1-203ENST00000452973 SCGNO76038 276 aa10.25□□□□□ -0.77
VTA1-203ENST00000452973 CSTBP04080 98 aaKnown RBP10.25□□□□□ -0.77
VTA1-203ENST00000452973 MELTFP08582 738 aa10.25□□□□□ -0.77
VTA1-203ENST00000452973 MECP2P51608 486 aaKnown RBP10.25□□□□□ -0.77
VTA1-203ENST00000452973 MEF2DQ14814 521 aa10.25□□□□□ -0.77
VTA1-203ENST00000452973 BRICD5Q6PL45 260 aa10.25□□□□□ -0.77
VTA1-203ENST00000452973 NUFIP2Q7Z417 695 aaKnown RBP10.25□□□□□ -0.77
VTA1-203ENST00000452973 SPICQ8N5J4 248 aa10.25□□□□□ -0.77
VTA1-203ENST00000452973 MDS2Q8NDY4 140 aa10.25□□□□□ -0.77
VTA1-203ENST00000452973 APH1AQ96BI3 265 aa10.25□□□□□ -0.77
VTA1-203ENST00000452973 ELMOD3Q96FG2 381 aa10.25□□□□□ -0.77
VTA1-203ENST00000452973 PRRT1Q99946 306 aa10.25□□□□□ -0.77
VTA1-203ENST00000452973 DSPP15924 2871 aaKnown RBP10.25□□□□□ -0.77
VTA1-203ENST00000452973 FXYD6-FXYD2A0A087WZ82 144 aa10.24□□□□□ -0.77
VTA1-203ENST00000452973 NRASP01111 189 aa10.24□□□□□ -0.77
VTA1-203ENST00000452973 PI3P19957 117 aa10.24□□□□□ -0.77
VTA1-203ENST00000452973 GSK3AP49840 483 aa10.24□□□□□ -0.77
VTA1-203ENST00000452973 RPS27AP62979 156 aaKnown RBP10.24□□□□□ -0.77
VTA1-203ENST00000452973 PDCD1Q15116 288 aa10.24□□□□□ -0.77
VTA1-203ENST00000452973 RSU1Q15404 277 aa10.24□□□□□ -0.77
VTA1-203ENST00000452973 TAF9Q16594 264 aa10.24□□□□□ -0.77
VTA1-203ENST00000452973 MICBQ29980 383 aa10.24□□□□□ -0.77
VTA1-203ENST00000452973 SEZ6L2Q6UXD5 910 aa10.24□□□□□ -0.77
VTA1-203ENST00000452973 PIP4P1Q86T03 277 aa10.24□□□□□ -0.77
VTA1-203ENST00000452973 OR8H3Q8N146 312 aa10.24□□□□□ -0.77
VTA1-203ENST00000452973 MARCH1Q8TCQ1 289 aa10.24□□□□□ -0.77
VTA1-203ENST00000452973 SSC4DQ8WTU2 575 aa10.24□□□□□ -0.77
VTA1-203ENST00000452973 BORCS8Q96FH0 119 aa10.24□□□□□ -0.77
VTA1-203ENST00000452973 TRAF4Q9BUZ4 470 aaPredicted RBP10.24□□□□□ -0.77
VTA1-203ENST00000452973 FXYD6Q9H0Q3 95 aa10.24□□□□□ -0.77
VTA1-203ENST00000452973 ZNF581Q9P0T4 197 aa10.24□□□□□ -0.77
VTA1-203ENST00000452973 IGKV1-27A0A075B6S5 117 aa10.24□□□□□ -0.77
VTA1-203ENST00000452973 FAM25EA8MYX2 175 aa10.24□□□□□ -0.77
VTA1-203ENST00000452973 ARPC5O15511 151 aa10.24□□□□□ -0.77
VTA1-203ENST00000452973 ZNF292O60281 2723 aa10.24□□□□□ -0.77
VTA1-203ENST00000452973 GIPP09681 153 aaPredicted RBP10.24□□□□□ -0.77
VTA1-203ENST00000452973 UBBP0CG47 229 aa10.24□□□□□ -0.77
VTA1-203ENST00000452973 NPY4RP50391 375 aa10.24□□□□□ -0.77
VTA1-203ENST00000452973 AP2S1P53680 142 aaPredicted RBP10.24□□□□□ -0.77
VTA1-203ENST00000452973 BAMBIQ13145 260 aa10.24□□□□□ -0.77
VTA1-203ENST00000452973 DHRS2Q13268 280 aa10.24□□□□□ -0.77
VTA1-203ENST00000452973 GRK1Q15835 563 aa10.24□□□□□ -0.77
VTA1-203ENST00000452973 LRRC37A5PQ49AS3 106 aa10.24□□□□□ -0.77
VTA1-203ENST00000452973 MOB3CQ70IA8 216 aa10.24□□□□□ -0.77
VTA1-203ENST00000452973 C12orf45Q8N5I9 185 aaPredicted RBP10.24□□□□□ -0.77
VTA1-203ENST00000452973 ADAD2Q8NCV1 583 aaKnown RBP10.24□□□□□ -0.77
VTA1-203ENST00000452973 FBXW5Q969U6 566 aa10.24□□□□□ -0.77
VTA1-203ENST00000452973 FBLN5Q9UBX5 448 aa10.24□□□□□ -0.77
VTA1-203ENST00000452973 ZNF503-AS2A6NEH8 195 aa10.24□□□□□ -0.77
VTA1-203ENST00000452973 F5H5P2 479 aa10.24□□□□□ -0.77
VTA1-203ENST00000452973 MMP7P09237 267 aaPredicted RBP10.24□□□□□ -0.77
VTA1-203ENST00000452973 AMY2BP19961 511 aa10.24□□□□□ -0.77
VTA1-203ENST00000452973 RAP2BP61225 183 aa10.24□□□□□ -0.77
VTA1-203ENST00000452973 MRGPRFQ96AM1 343 aa10.24□□□□□ -0.77
VTA1-203ENST00000452973 SEC22AQ96IW7 307 aa10.24□□□□□ -0.77
VTA1-203ENST00000452973 HDHD3Q9BSH5 251 aaPredicted RBP10.24□□□□□ -0.77
VTA1-203ENST00000452973 ZNF552Q9H707 407 aaPredicted RBP10.24□□□□□ -0.77
VTA1-203ENST00000452973 PLEKHJ1Q9NW61 149 aa10.24□□□□□ -0.77
VTA1-203ENST00000452973 PRSS50Q9UI38 385 aa10.24□□□□□ -0.77
VTA1-203ENST00000452973 GSTP1P09211 210 aaKnown RBP10.23□□□□□ -0.77
VTA1-203ENST00000452973 NAT2P11245 290 aa10.23□□□□□ -0.77
VTA1-203ENST00000452973 EDN3P14138 238 aa10.23□□□□□ -0.77
VTA1-203ENST00000452973 S100A1P23297 94 aa10.23□□□□□ -0.77
VTA1-203ENST00000452973 PER3P56645 1201 aa10.23□□□□□ -0.77
VTA1-203ENST00000452973 FAM3AP98173 230 aa10.23□□□□□ -0.77
VTA1-203ENST00000452973 PLCXD3Q63HM9 321 aa10.23□□□□□ -0.77
VTA1-203ENST00000452973 KCTD9Q7L273 389 aa10.23□□□□□ -0.77
VTA1-203ENST00000452973 BHLHE23Q8NDY6 225 aa10.23□□□□□ -0.77
VTA1-203ENST00000452973 FDCSPQ8NFU4 85 aa10.23□□□□□ -0.77
VTA1-203ENST00000452973 GPR137Q96N19 417 aa10.23□□□□□ -0.77
VTA1-203ENST00000452973 CLEC4MQ9H2X3 399 aaPredicted RBP10.23□□□□□ -0.77
VTA1-203ENST00000452973 RP1L1Q8IWN7 2480 aaPredicted RBP10.23□□□□□ -0.77
VTA1-203ENST00000452973 CEP250Q9BV73 2442 aa10.23□□□□□ -0.77
VTA1-203ENST00000452973 IGKV3D-15A0A087WSY6 115 aa10.23□□□□□ -0.77
VTA1-203ENST00000452973 TRGV5A0A0B4J1U4 118 aa10.23□□□□□ -0.77
VTA1-203ENST00000452973 WISP2O76076 250 aa10.23□□□□□ -0.77
VTA1-203ENST00000452973 WT1P19544 449 aaPredicted RBP10.23□□□□□ -0.77
VTA1-203ENST00000452973 OR3A3P47888 321 aa10.23□□□□□ -0.77
VTA1-203ENST00000452973 OR3A2P47893 321 aa10.23□□□□□ -0.77
VTA1-203ENST00000452973 RBP2P50120 134 aa10.23□□□□□ -0.77
VTA1-203ENST00000452973 PPP1R1AQ13522 171 aa10.23□□□□□ -0.77
VTA1-203ENST00000452973 HLXQ14774 488 aaPredicted RBP10.23□□□□□ -0.77
VTA1-203ENST00000452973 CDH26Q8IXH8 852 aa10.23□□□□□ -0.77
VTA1-203ENST00000452973 CSNK2A3Q8NEV1 391 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms