RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 CPEB3Q8NE35 698 aaKnown RBP10.62□□□□□ -0.71
COL27A1-202ENST00000451716 OR9K2Q8NGE7 335 aa10.62□□□□□ -0.71
COL27A1-202ENST00000451716 OR5D18Q8NGL1 313 aa10.62□□□□□ -0.71
COL27A1-202ENST00000451716 TNFAIP8L1Q8WVP5 186 aa10.62□□□□□ -0.71
COL27A1-202ENST00000451716 SLC6A7Q99884 636 aa10.62□□□□□ -0.71
COL27A1-202ENST00000451716 SELENOIQ9C0D9 397 aa10.62□□□□□ -0.71
COL27A1-202ENST00000451716 ARRDC1-AS1Q9H2J1 176 aa10.62□□□□□ -0.71
COL27A1-202ENST00000451716 BANF2Q9H503 90 aa10.62□□□□□ -0.71
COL27A1-202ENST00000451716 SH2D2AQ9NP31 389 aa10.62□□□□□ -0.71
COL27A1-202ENST00000451716 RAB22AQ9UL26 194 aa10.62□□□□□ -0.71
COL27A1-202ENST00000451716 DOCK10Q96BY6 2186 aa10.62□□□□□ -0.71
COL27A1-202ENST00000451716 UBE2QL1A1L167 161 aa10.62□□□□□ -0.71
COL27A1-202ENST00000451716 BTBD17A6NE02 478 aa10.62□□□□□ -0.71
COL27A1-202ENST00000451716 SNRPGP15A8MWD9 76 aa10.62□□□□□ -0.71
COL27A1-202ENST00000451716 DBHP09172 617 aa10.62□□□□□ -0.71
COL27A1-202ENST00000451716 MECP2P51608 486 aaKnown RBP10.62□□□□□ -0.71
COL27A1-202ENST00000451716 QRFPP83859 136 aa10.62□□□□□ -0.71
COL27A1-202ENST00000451716 DCAF12Q5T6F0 453 aa10.62□□□□□ -0.71
COL27A1-202ENST00000451716 ELP2Q6IA86 826 aa10.62□□□□□ -0.71
COL27A1-202ENST00000451716 REC114Q7Z4M0 266 aa10.62□□□□□ -0.71
COL27A1-202ENST00000451716 TRAPPC6BQ86SZ2 158 aa10.62□□□□□ -0.71
COL27A1-202ENST00000451716 OR5AS1Q8N127 324 aa10.62□□□□□ -0.71
COL27A1-202ENST00000451716 SPICQ8N5J4 248 aa10.62□□□□□ -0.71
COL27A1-202ENST00000451716 FOXRED1Q96CU9 486 aaPredicted RBP10.62□□□□□ -0.71
COL27A1-202ENST00000451716 FBXO4Q9UKT5 387 aa10.62□□□□□ -0.71
COL27A1-202ENST00000451716 TCFL5Q9UL49 500 aa10.62□□□□□ -0.71
COL27A1-202ENST00000451716 PADI1Q9ULC6 663 aa10.62□□□□□ -0.71
COL27A1-202ENST00000451716 LOXL2Q9Y4K0 774 aa10.62□□□□□ -0.71
COL27A1-202ENST00000451716 NCKAP5O14513 1909 aa10.61□□□□□ -0.71
COL27A1-202ENST00000451716 A0A087WZY1 265 aa10.61□□□□□ -0.71
COL27A1-202ENST00000451716 TUBAL3A6NHL2 446 aa10.61□□□□□ -0.71
COL27A1-202ENST00000451716 CRYBA1P05813 215 aa10.61□□□□□ -0.71
COL27A1-202ENST00000451716 ZNF35P13682 527 aa10.61□□□□□ -0.71
COL27A1-202ENST00000451716 GUCA1AP43080 201 aaPredicted RBP10.61□□□□□ -0.71
COL27A1-202ENST00000451716 PRSS12P56730 875 aa10.61□□□□□ -0.71
COL27A1-202ENST00000451716 MICBQ29980 383 aa10.61□□□□□ -0.71
COL27A1-202ENST00000451716 ZNF260Q3ZCT1 412 aa10.61□□□□□ -0.71
COL27A1-202ENST00000451716 GLIPR1L1Q6UWM5 242 aa10.61□□□□□ -0.71
COL27A1-202ENST00000451716 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.61□□□□□ -0.71
COL27A1-202ENST00000451716 ZNF584Q8IVC4 421 aa10.61□□□□□ -0.71
COL27A1-202ENST00000451716 BPIFB2Q8N4F0 458 aa10.61□□□□□ -0.71
COL27A1-202ENST00000451716 ELMOD3Q96FG2 381 aa10.61□□□□□ -0.71
COL27A1-202ENST00000451716 UNKLQ9H9P5 680 aaKnown RBP10.61□□□□□ -0.71
COL27A1-202ENST00000451716 PTTG3PQ9NZH4 202 aa10.61□□□□□ -0.71
COL27A1-202ENST00000451716 ZNF16P17020 682 aaPredicted RBP10.61□□□□□ -0.71
COL27A1-202ENST00000451716 CXCL2P19875 107 aa10.61□□□□□ -0.71
COL27A1-202ENST00000451716 NTF4P34130 210 aa10.61□□□□□ -0.71
COL27A1-202ENST00000451716 GK2Q14410 553 aaPredicted RBP10.61□□□□□ -0.71
COL27A1-202ENST00000451716 ZNF239Q16600 458 aaKnown RBP10.61□□□□□ -0.71
COL27A1-202ENST00000451716 C11orf88Q6PI97 169 aa10.61□□□□□ -0.71
COL27A1-202ENST00000451716 ZIC4Q8N9L1 334 aa10.61□□□□□ -0.71
COL27A1-202ENST00000451716 TMEM229BQ8NBD8 167 aa10.61□□□□□ -0.71
COL27A1-202ENST00000451716 OR14L1PQ8NHC6 308 aa10.61□□□□□ -0.71
COL27A1-202ENST00000451716 AQP3Q92482 292 aa10.61□□□□□ -0.71
COL27A1-202ENST00000451716 BSCL2Q96G97 398 aaPredicted RBP10.61□□□□□ -0.71
COL27A1-202ENST00000451716 C2orf88Q9BSF0 95 aa10.61□□□□□ -0.71
COL27A1-202ENST00000451716 ASCL3Q9NQ33 180 aa10.61□□□□□ -0.71
COL27A1-202ENST00000451716 LOC102725191A0A1B0GVB3 256 aa10.6□□□□□ -0.71
COL27A1-202ENST00000451716 TRAPPC6AO75865 159 aa10.6□□□□□ -0.71
COL27A1-202ENST00000451716 MPIG6BO95866 241 aa10.6□□□□□ -0.71
COL27A1-202ENST00000451716 GIPP09681 153 aaPredicted RBP10.6□□□□□ -0.71
COL27A1-202ENST00000451716 ZNF735P0CB33 412 aa10.6□□□□□ -0.71
COL27A1-202ENST00000451716 MSR1P21757 451 aa10.6□□□□□ -0.71
COL27A1-202ENST00000451716 RBP2P50120 134 aa10.6□□□□□ -0.71
COL27A1-202ENST00000451716 ENDOGQ14249 297 aaKnown RBP10.6□□□□□ -0.71
COL27A1-202ENST00000451716 ZNF529Q6P280 563 aa10.6□□□□□ -0.71
COL27A1-202ENST00000451716 OR2AK2Q8NG84 335 aa10.6□□□□□ -0.71
COL27A1-202ENST00000451716 CT55Q8WUE5 264 aa10.6□□□□□ -0.71
COL27A1-202ENST00000451716 PGAM5Q96HS1 289 aa10.6□□□□□ -0.71
COL27A1-202ENST00000451716 LYZL4Q96KX0 146 aa10.6□□□□□ -0.71
COL27A1-202ENST00000451716 MRPS28Q9Y2Q9 187 aaKnown RBP10.6□□□□□ -0.71
COL27A1-202ENST00000451716 IGKV1-9A0A0C4DH69 117 aa10.6□□□□□ -0.71
COL27A1-202ENST00000451716 RFPL4AA6NLU0 287 aa10.6□□□□□ -0.71
COL27A1-202ENST00000451716 RFPL4AL1F8VTS6 287 aa10.6□□□□□ -0.71
COL27A1-202ENST00000451716 CBR3O75828 277 aa10.6□□□□□ -0.71
COL27A1-202ENST00000451716 OR2A4O95047 310 aa10.6□□□□□ -0.71
COL27A1-202ENST00000451716 ITGB2P05107 769 aa10.6□□□□□ -0.71
COL27A1-202ENST00000451716 AVPI1Q5T686 147 aa10.6□□□□□ -0.71
COL27A1-202ENST00000451716 TMEM123Q8N131 208 aa10.6□□□□□ -0.71
COL27A1-202ENST00000451716 ZNF383Q8NA42 475 aa10.6□□□□□ -0.71
COL27A1-202ENST00000451716 NABP1Q96AH0 204 aa10.6□□□□□ -0.71
COL27A1-202ENST00000451716 OR2A7Q96R45 310 aa10.6□□□□□ -0.71
COL27A1-202ENST00000451716 GPER1Q99527 375 aa10.6□□□□□ -0.71
COL27A1-202ENST00000451716 C19orf12Q9NSK7 152 aa10.6□□□□□ -0.71
COL27A1-202ENST00000451716 GPR160Q9UJ42 338 aa10.6□□□□□ -0.71
COL27A1-202ENST00000451716 A0A0A6YYD4 124 aa10.59□□□□□ -0.71
COL27A1-202ENST00000451716 M0R233 179 aa10.59□□□□□ -0.71
COL27A1-202ENST00000451716 SOCS1O15524 211 aa10.59□□□□□ -0.71
COL27A1-202ENST00000451716 P04436 131 aa10.59□□□□□ -0.71
COL27A1-202ENST00000451716 OR4E1P0C645 316 aa10.59□□□□□ -0.71
COL27A1-202ENST00000451716 PATE4P0C8F1 98 aa10.59□□□□□ -0.71
COL27A1-202ENST00000451716 CD46P15529 392 aa10.59□□□□□ -0.71
COL27A1-202ENST00000451716 RAB6AP20340 208 aa10.59□□□□□ -0.71
COL27A1-202ENST00000451716 FKBP2P26885 142 aaKnown RBP10.59□□□□□ -0.71
COL27A1-202ENST00000451716 MPLP40238 635 aa10.59□□□□□ -0.71
COL27A1-202ENST00000451716 CXADRP78310 365 aa10.59□□□□□ -0.71
COL27A1-202ENST00000451716 KCNMB1Q16558 191 aa10.59□□□□□ -0.71
COL27A1-202ENST00000451716 RSPO1Q2MKA7 263 aaPredicted RBP10.59□□□□□ -0.71
COL27A1-202ENST00000451716 ATPAF1Q5TC12 328 aaPredicted RBP10.59□□□□□ -0.71
COL27A1-202ENST00000451716 PLXDC2Q6UX71 529 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms